| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_04590 | | transcriptional regulator GcvA | 1.0 | CSW01_03525 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 0.60 | 5 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | 0.48 | GFF1311 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.48 | 18 |
| Serratia liquefaciens MT49 | 0.72 | IAI46_20340 | | transcriptional regulator GcvA | 0.50 | IAI46_20450 | | phosphoenolpyruvate--protein phosphotransferase | low | > 87 |
| Rahnella sp. WP5 | 0.72 | EX31_RS13110 | | transcriptional regulator GcvA | 0.48 | EX31_RS13200 | | phosphoenolpyruvate--protein phosphotransferase | low | > 89 |
| Shewanella amazonensis SB2B | 0.72 | Sama_2429 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.42 | Sama_0864 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 62 |
| Erwinia amylovora T8 | 0.72 | OLJFJH_09170 | | Glycine cleavage system transcriptional activator | 0.48 | OLJFJH_09055 | | phosphoenolpyruvate--protein phosphotransferase | low | > 58 |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | JDDGAC_23670 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 87 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | MCAODC_10530 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 87 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | OKFHMN_20005 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 79 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | BNILDI_10370 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Escherichia coli BW25113 | 0.72 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | 0.48 | b2829 | ptsP | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | 0.31 | 58 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | HEPCGN_19260 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 88 |
| Escherichia fergusonii Becca | 0.72 | EFB2_01109 | | Glycine cleavage system transcriptional activator | 0.48 | EFB2_01055 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | 0.48 | OHPLBJKB_00901 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 74 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | NOLOHH_11890 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 76 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | NIAGMN_17775 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 80 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | 0.48 | ECOLIN_RS15875 | | phosphoenolpyruvate--protein phosphotransferase | 0.68 | 18 |
| Escherichia coli BL21 | 0.72 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | 0.48 | ECD_02677 | | PEP-protein phosphotransferase enzyme I; GAF domain containing protein | 0.80 | 1 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.48 | KEDOAH_08125 | ptsP | phosphoenolpyruvate--protein phosphotransferase | — | — |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | 0.48 | MPMX20_03692 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 85 |
| Erwinia tracheiphila HP pepo 2.2 | 0.71 | IJEDHG_17275 | gcvA | Glycine cleavage system transcriptional activator | 0.48 | IJEDHG_17120 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS06255 | | transcriptional regulator GcvA | 0.48 | LU632_RS06110 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 73 |
| Pantoea sp. MT58 | 0.71 | IAI47_04025 | | transcriptional regulator GcvA | 0.48 | IAI47_03920 | | phosphoenolpyruvate--protein phosphotransferase | 0.40 | 10 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05050 | | transcriptional regulator GcvA | 0.47 | DDA3937_RS04950 | | phosphoenolpyruvate--protein phosphotransferase | low | > 74 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS22955 | | transcriptional regulator GcvA | 0.46 | BWI76_RS23270 | | phosphoenolpyruvate--protein phosphotransferase PtsP | low | > 92 |
| Pantoea agglomerans CFBP13505 P0401 | 0.71 | PagCFBP13505_RS16945 | | transcriptional regulator GcvA | 0.48 | PagCFBP13505_RS17045 | | phosphoenolpyruvate--protein phosphotransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS05390 | | transcriptional regulator GcvA | 0.47 | DZA65_RS05300 | | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2883 | | Transcriptional regulator | 0.48 | EX28DRAFT_2904 | | phosphoenolpyruvate-protein phosphotransferase | low | > 76 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS05050 | | transcriptional regulator GcvA | 0.47 | HGI48_RS04960 | | phosphoenolpyruvate--protein phosphotransferase | low | > 71 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_2894 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.42 | Shewana3_3042 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | — | — |
| Pectobacterium carotovorum WPP14 | 0.71 | HER17_RS16415 | | transcriptional regulator GcvA | 0.46 | HER17_RS16580 | | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Shewanella loihica PV-4 | 0.71 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.42 | Shew_1039 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | 0.41 | SO1332 | ptsP | phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.65 | MIT1002_01520 | | Gcv operon activator | 0.41 | MIT1002_00648 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 70 |
| Klebsiella pneumoniae MKP103 | 0.63 | KDGMDA_03515 | | Glycine cleavage system transcriptional activator | 0.47 | KDGMDA_03855 | | phosphoenolpyruvate--protein phosphotransferase | 0.34 | 5 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | 0.23 | MPMX19_02675 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 112 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS20105 | | transcriptional regulator | 0.23 | AZOBR_RS18900 | | peptidase | low | > 97 |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | 0.41 | Pf6N2E2_3942 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 103 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2214 | | Transcriptional Regulator, LysR family (NCBI) | 0.23 | Rru_A0745 | | PTSINtr with GAF domain, PtsP (NCBI) | low | > 58 |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01174 | | LysR-family transcriptional regulator | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS09680 | | transcriptional regulator GcvA | 0.25 | A4249_RS14485 | | phosphoenolpyruvate--protein phosphotransferase | low | > 48 |
| Agrobacterium fabrum C58 | 0.34 | Atu2078 | | transcriptional regulator, LysR family | 0.25 | Atu4173 | | phosphoenolpyruvate-protein phosphotransferase | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.34 | COO64_RS14470 | gcvA | transcriptional regulator GcvA | 0.41 | COO64_RS12700 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 93 |
| Pseudomonas aeruginosa PUPa3 | 0.31 | DQ20_RS37090 | | LysR family transcriptional regulator | 0.41 | DQ20_RS37640 | ptsP;inference=COORDINATES | phosphoenolpyruvate--protein phosphotransferase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.31 | DY961_RS22230 | | LysR family transcriptional regulator | 0.41 | DY961_RS21655 | ptsP;inference=COORDINATES | phosphoenolpyruvate--protein phosphotransferase | 0.29 | 27 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_15125 | | LysR family transcriptional regulator | 0.41 | AO356_10350 | | phosphoenolpyruvate-protein phosphotransferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.31 | PFR28_04727 | | Glycine cleavage system transcriptional activator | 0.41 | PFR28_04830 | | Phosphoenolpyruvate-dependent phosphotransferase system | 0.18 | 73 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_23190 | | LysR family transcriptional regulator | 0.41 | IKLFDK_23750 | | phosphoenolpyruvate--protein phosphotransferase | low | > 98 |
| Sphingomonas koreensis DSMZ 15582 | 0.31 | Ga0059261_4130 | | Transcriptional regulator | 0.22 | Ga0059261_2514 | | phosphoenolpyruvate-protein phosphotransferase | low | > 68 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_11695 | | Transcriptional regulator, LysR family | 0.41 | OH686_11430 | | Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | 0.71 | 72 |
| Pseudomonas lactucae CFBP13502 | 0.30 | GEMAOFIL_02417 | | Glycine cleavage system transcriptional activator | 0.42 | GEMAOFIL_05538 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 96 |
| Pseudomonas sp. BP01 | 0.30 | JOY50_RS09180 | | LysR family transcriptional regulator | 0.41 | JOY50_RS20665 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 84 |
| Pseudomonas putida KT2440 | 0.30 | PP_0661 | | putative Transcriptional regulator AmpR | 0.41 | PP_5145 | | phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) | low | > 96 |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS01615 | | transcriptional regulator GcvA | 0.25 | ABIE40_RS17300 | | phosphoenolpyruvate--protein phosphotransferase | — | — |
| Pseudomonas stutzeri RCH2 | 0.30 | Psest_2739 | | Transcriptional regulator | 0.41 | Psest_3862 | | phosphoenolpyruvate-protein phosphotransferase | low | > 67 |
| Pseudomonas simiae WCS417 | 0.30 | PS417_23350 | | LysR family transcriptional regulator | 0.41 | PS417_26985 | | phosphoenolpyruvate-protein phosphotransferase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS25165 | | LysR family transcriptional regulator | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | low | > 109 |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS04220 | | transcriptional regulator GcvA | 0.24 | AMB_RS08150 | | phosphoenolpyruvate--protein phosphotransferase | low | > 64 |
| Pseudomonas fluorescens FW300-N1B4 | 0.30 | Pf1N1B4_1817 | | Glycine cleavage system transcriptional activator | 0.41 | Pf1N1B4_2284 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 86 |
| Pseudomonas segetis P6 | 0.29 | ACVTMO_RS01970 | | LysR family transcriptional regulator | 0.41 | ACVTMO_RS02900 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_5015 | | transcriptional regulator, LysR family | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_555 | | Glycine cleavage system transcriptional activator | 0.41 | PfGW456L13_953 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 87 |
| Sphingobium sp. HT1-2 | 0.29 | GFF1432 | | Transcriptional regulator, LysR family | 0.24 | GFF2007 | | Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated | low | > 95 |
| Pseudomonas orientalis W4I3 | 0.29 | QF045_RS03520 | | LysR family transcriptional regulator | 0.42 | QF045_RS01375 | | phosphoenolpyruvate--protein phosphotransferase | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_15505 | | LysR family transcriptional regulator | 0.41 | AO353_08465 | | phosphoenolpyruvate-protein phosphotransferase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.29 | GFF687 | | Glycine cleavage system transcriptional activator | 0.41 | GFF264 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 89 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS23870 | | transcriptional regulator GcvA | 0.25 | ABIE41_RS23820 | | phosphoenolpyruvate--protein phosphotransferase | low | > 77 |
| Sinorhizobium meliloti 1021 | 0.28 | SMa0179 | | LysR family transcriptional regulator | 0.25 | SMc02437 | | phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein | — | — |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | 0.38 | MPMX26_00341 | | Phosphoenolpyruvate-dependent phosphotransferase system | — | — |
| Phaeobacter inhibens DSM 17395 | 0.26 | PGA1_c15720 | | putative glycine cleavage system transcriptional activator | 0.22 | PGA1_c23500 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_3068 | | transcriptional regulator, LysR family (RefSeq) | 0.22 | Dshi_2062 | | PTSINtr with GAF domain, PtsP (RefSeq) | low | > 64 |
| Marinobacter adhaerens HP15 | 0.24 | HP15_1669 | | transcriptional regulator, LysR family protein | 0.41 | HP15_463 | | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein | low | > 73 |
| Acinetobacter baumannii LAC-4 | 0.24 | RR41_RS15665 | | LysR family transcriptional regulator | 0.38 | RR41_RS16935 | | phosphoenolpyruvate--protein phosphotransferase | low | > 55 |
| Rhodopseudomonas palustris CGA009 | 0.23 | TX73_013680 | | LysR substrate-binding domain-containing protein | 0.25 | TX73_003130 | | phosphoenolpyruvate--protein phosphotransferase | low | > 86 |
| Xanthobacter sp. DMC5 | 0.22 | GFF4114 | | HTH-type transcriptional regulator TrpI | 0.23 | GFF1659 | | Phosphoenolpyruvate-dependent phosphotransferase system | — | — |
Not shown: 26 genomes with orthologs for CSW01_04590 only; 0 genomes with orthologs for CSW01_03525 only