Conservation of cofitness between CSW01_04395 and CSW01_02270 in Vibrio cholerae E7946 ATCC 55056

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04395 DNA repair protein RecN 1.0 CSW01_02270 malate dehydrogenase 0.43 19
Shewanella oneidensis MR-1 0.56 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.81 SO0770 mdh malate dehydrogenase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_1104 recombination and repair protein (RefSeq) 0.81 Shewana3_3509 malate dehydrogenase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.56 Sama_1026 recombination and repair protein (RefSeq) 0.80 Sama_0672 malate dehydrogenase (RefSeq) low > 62
Shewanella loihica PV-4 0.56 Shew_1196 recombination and repair protein (RefSeq) 0.79 Shew_0867 malate dehydrogenase (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4162 DNA repair protein RecN 0.81 GFF2149 Malate dehydrogenase (EC 1.1.1.37) 0.52 29
Enterobacter sp. TBS_079 0.54 MPMX20_03486 DNA repair protein RecN 0.81 MPMX20_04140 Malate dehydrogenase low > 85
Escherichia fergusonii Becca 0.54 EFB2_01277 DNA repair protein RecN 0.82 EFB2_00594 Malate dehydrogenase low > 86
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2719 DNA repair protein RecN 0.81 EX28DRAFT_3285 malate dehydrogenase (NAD) (EC 1.1.1.37) low > 76
Escherichia coli BL21 0.54 ECD_02504 recombination and repair protein 0.82 ECD_03096 malate dehydrogenase, NAD(P)-binding low > 61
Rahnella sp. WP5 0.54 EX31_RS21760 DNA repair protein RecN 0.79 EX31_RS08645 malate dehydrogenase low > 89
Escherichia coli ECOR38 0.54 HEPCGN_20265 recN DNA repair protein RecN 0.82 HEPCGN_16660 mdh malate dehydrogenase low > 88
Escherichia coli ECRC101 0.54 MCAODC_11670 recN DNA repair protein RecN 0.82 MCAODC_08315 mdh malate dehydrogenase 0.29 54
Escherichia coli ECOR27 0.54 NOLOHH_12815 recN DNA repair protein RecN 0.82 NOLOHH_09595 mdh malate dehydrogenase low > 76
Escherichia coli ECRC102 0.54 NIAGMN_18915 recN DNA repair protein RecN 0.82 NIAGMN_15555 mdh malate dehydrogenase low > 80
Escherichia coli Nissle 1917 0.54 ECOLIN_RS14775 DNA repair protein RecN 0.82 ECOLIN_RS18555 malate dehydrogenase low > 55
Klebsiella pneumoniae MKP103 0.54 KDGMDA_02250 DNA repair protein RecN 0.81 KDGMDA_06200 malate dehydrogenase low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01091 DNA repair protein RecN 0.82 OHPLBJKB_00468 Malate dehydrogenase low > 74
Escherichia coli ECRC100 0.54 OKFHMN_21145 recN DNA repair protein RecN 0.82 OKFHMN_17795 mdh malate dehydrogenase low > 79
Escherichia coli ECRC99 0.54 KEDOAH_07075 recN DNA repair protein RecN 0.82 KEDOAH_10355 mdh malate dehydrogenase — —
Escherichia coli BW25113 0.54 b2616 recN recombination and repair protein (NCBI) 0.82 b3236 mdh malate dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.54 BNILDI_11620 recN DNA repair protein RecN 0.82 BNILDI_01940 mdh malate dehydrogenase low > 75
Escherichia coli ECRC98 0.54 JDDGAC_24810 recN DNA repair protein RecN 0.82 JDDGAC_21420 mdh malate dehydrogenase low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS21560 DNA repair protein RecN 0.81 BWI76_RS25420 malate dehydrogenase low > 92
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS14700 DNA repair protein RecN 0.80 PagCFBP13505_RS11115 malate dehydrogenase low > 74
Pantoea sp. MT58 0.53 IAI47_04810 DNA repair protein RecN 0.80 IAI47_02520 malate dehydrogenase low > 76
Erwinia amylovora T8 0.53 OLJFJH_10175 DNA repair protein RecN 0.77 OLJFJH_06980 malate dehydrogenase low > 58
Serratia liquefaciens MT49 0.52 IAI46_19635 DNA repair protein RecN 0.79 IAI46_01825 malate dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS16985 recN DNA repair protein RecN 0.79 LU632_RS21365 mdh malate dehydrogenase low > 74
Dickeya dadantii 3937 0.52 DDA3937_RS04325 DNA repair protein RecN 0.79 DDA3937_RS02970 malate dehydrogenase low > 74
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_26925 recN DNA repair protein RecN 0.79 IJEDHG_13655 mdh malate dehydrogenase low > 61
Dickeya dianthicola ME23 0.51 DZA65_RS04235 DNA repair protein RecN 0.79 DZA65_RS03130 malate dehydrogenase 0.43 47
Dickeya dianthicola 67-19 0.51 HGI48_RS04320 DNA repair protein RecN 0.79 HGI48_RS03135 malate dehydrogenase low > 71
Pectobacterium carotovorum WPP14 0.51 HER17_RS17420 DNA repair protein RecN 0.80 HER17_RS18390 malate dehydrogenase low > 75
Alteromonas macleodii MIT1002 0.46 MIT1002_01443 Recombination protein N 0.69 MIT1002_03492 Malate dehydrogenase — —
Pseudomonas sp. BP01 0.40 JOY50_RS26735 recN DNA repair protein RecN 0.12 JOY50_RS27245 malate dehydrogenase low > 84
Rhodanobacter sp. FW510-T8 0.35 OKGIIK_07340 recN DNA repair protein RecN 0.09 OKGIIK_06530 mdh malate dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS11400 DNA repair protein RecN 0.10 LRK53_RS09435 malate dehydrogenase low > 59
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS17960 DNA repair protein RecN 0.10 LRK54_RS00720 malate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.34 LRK55_RS17815 DNA repair protein RecN 0.10 LRK55_RS00495 malate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3460 DNA repair protein RecN 0.11 Ac3H11_3153 Malate dehydrogenase (EC 1.1.1.37) — —
Variovorax sp. SCN45 0.32 GFF2357 DNA repair protein RecN 0.10 GFF3901 Malate dehydrogenase (EC 1.1.1.37) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF829 DNA repair protein RecN 0.09 GFF3372 Malate dehydrogenase (EC 1.1.1.37) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_2067 DNA repair protein RecN 0.16 Echvi_2076 malate dehydrogenase, NAD-dependent — —
Sinorhizobium meliloti 1021 0.28 SMc01877 DNA repair protein 0.13 SMc02479 malate dehydrogenase — —
Agrobacterium fabrum C58 0.27 Atu2083 DNA repair protein RecN 0.14 Atu2639 putative malate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c09720 DNA repair protein RecN 0.16 PGA1_c03650 malate dehydrogenase Mdh — —
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS02000 DNA repair protein RecN 0.15 HMPREF1078_RS13680 malate dehydrogenase low > 61
Bosea sp. OAE506 0.27 ABIE41_RS12645 DNA repair protein RecN 0.15 ABIE41_RS08960 malate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS14855 DNA repair protein RecN 0.17 CA265_RS03080 malate dehydrogenase low > 88
Bacteroides stercoris CC31F 0.26 HMPREF1181_RS10900 DNA repair protein RecN 0.14 HMPREF1181_RS06655 malate dehydrogenase low > 56
Magnetospirillum magneticum AMB-1 0.26 AMB_RS19520 DNA repair protein RecN 0.17 AMB_RS20025 malate dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.26 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) 0.14 BT3911 malate dehydrogenase (NCBI ptt file) low > 81
Xanthobacter sp. DMC5 0.25 GFF2252 DNA repair protein RecN 0.14 GFF4411 Malate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_018240 DNA repair protein RecN 0.14 TX73_000995 malate dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.25 BACOVA_00200 DNA repair protein RecN 0.14 BACOVA_01130 malate dehydrogenase, NAD-dependent low > 96
Sphingobium sp. HT1-2 0.24 GFF2340 DNA repair protein RecN 0.16 GFF2450 Malate dehydrogenase (EC 1.1.1.37) — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS12395 DNA repair protein RecN 0.18 AZOBR_RS14060 malate dehydrogenase — —
Rhodospirillum rubrum S1H 0.24 Rru_A0940 DNA repair protein RecN (NCBI) 0.17 Rru_A1210 Malate dehydrogenase, NAD-dependent (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_1026 DNA repair protein RecN 0.15 Ga0059261_1338 malate dehydrogenase (NAD) (EC 1.1.1.37) — —
Azospirillum sp. SherDot2 0.24 MPMX19_01601 DNA repair protein RecN 0.17 MPMX19_00107 Malate dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_13235 DNA repair protein RecN 0.17 CA264_13275 malate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.23 Dshi_2413 DNA repair protein RecN (RefSeq) 0.17 Dshi_2876 malate dehydrogenase, NAD-dependent (RefSeq) — —
Cellulophaga baltica 18 0.22 M666_RS17655 DNA repair protein RecN 0.13 M666_RS00410 malate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS02620 DNA repair protein RecN 0.14 A4249_RS12675 malate dehydrogenase — —
Caulobacter crescentus NA1000 0.21 CCNA_02062 DNA repair protein recN 0.13 CCNA_03770 malate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_02062 DNA repair protein recN 0.13 CCNA_03770 malate dehydrogenase — —
Synechocystis sp000284455 PCC 6803 0.20 SGL_RS11690 DNA repair protein RecN 0.15 SGL_RS14885 malate dehydrogenase low > 52
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU2463 recN DNA repair protein RecN (TIGR) 0.10 DVU0600 ldh L-lactate dehydrogenase (TIGR) low > 55
Bifidobacterium breve UCC2003 0.18 BBR_RS14030 DNA repair protein RecN 0.10 BBR_RS16995 L-lactate dehydrogenase — —

Not shown: 47 genomes with orthologs for CSW01_04395 only; 4 genomes with orthologs for CSW01_02270 only