Conservation of cofitness between CSW01_07575 and CSW01_01830 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07575 NAD-dependent protein deacylase 1.0 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.48 17
Enterobacter sp. TBS_079 0.62 MPMX20_01801 NAD-dependent protein deacylase 0.71 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.71 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS11230 NAD-dependent deacylase 0.73 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Escherichia coli ECRC98 0.60 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.71 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC101 0.60 MCAODC_22800 cobB NAD-dependent protein deacylase 0.71 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli ECRC99 0.60 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.71 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia fergusonii Becca 0.60 EFB2_02855 NAD-dependent protein deacylase 0.71 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli BW25113 0.60 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.72 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Escherichia coli ECRC102 0.60 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.71 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC100 0.60 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.71 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli ECRC62 0.60 BNILDI_19130 cobB NAD-dependent protein deacylase 0.72 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli Nissle 1917 0.60 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.71 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECOR27 0.60 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.72 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_02546 NAD-dependent protein deacylase 0.72 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Escherichia coli ECOR38 0.60 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.72 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli BL21 0.60 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.72 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Pectobacterium carotovorum WPP14 0.60 HER17_RS08800 NAD-dependent protein deacylase 0.71 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.71 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Serratia liquefaciens MT49 0.60 IAI46_10355 NAD-dependent protein deacylase 0.70 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Pantoea sp. MT58 0.58 IAI47_11950 NAD-dependent protein deacylase 0.70 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Rahnella sp. WP5 0.57 EX31_RS24540 NAD-dependent protein deacylase 0.70 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Erwinia tracheiphila SCR3 0.56 LU632_RS14640 cobB NAD-dependent protein deacylase 0.68 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Dickeya dadantii 3937 0.56 DDA3937_RS12975 NAD-dependent protein deacylase 0.70 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS13510 NAD-dependent protein deacylase 0.69 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS13045 NAD-dependent protein deacylase 0.69 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Shewanella amazonensis SB2B 0.53 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.62 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.63 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.52 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.63 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.51 MIT1002_02145 NAD-dependent protein deacylase 0.57 MIT1002_03789 tRNA dimethylallyltransferase — —
Shewanella oneidensis MR-1 0.51 SO1938 cobB cobB protein (NCBI ptt file) 0.65 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Rhodospirillum rubrum S1H 0.49 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.21 Rru_A0466 tRNA isopentenyltransferase (NCBI) — —
Azospirillum brasilense Sp245 0.49 AZOBR_RS00620 NAD-dependent deacetylase 0.26 AZOBR_RS06550 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Azospirillum sp. SherDot2 0.49 MPMX19_02648 NAD-dependent protein deacylase 0.27 MPMX19_01778 tRNA dimethylallyltransferase — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS04415 NAD-dependent protein deacylase 0.27 AMB_RS17735 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 64
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_03594 SIR2 family protein 0.26 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Caulobacter crescentus NA1000 0.43 CCNA_03594 SIR2 family protein 0.26 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family 0.28 Ga0059261_0069 tRNA dimethylallyltransferase low > 68
Dinoroseobacter shibae DFL-12 0.36 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.17 Dshi_1492 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS12815 NAD-dependent deacylase 0.26 HMPREF1078_RS13930 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS09835 Sir2 family NAD-dependent protein deacetylase 0.29 ABZR88_RS17470 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Pseudomonas stutzeri RCH2 0.32 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.58 Psest_0682 tRNA dimethylallyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_23430 NAD-dependent deacetylase 0.63 AO356_08660 tRNA dimethylallyltransferase low > 104
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS13055 NAD-dependent protein deacylase 0.46 RR42_RS17210 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Acidovorax sp. GW101-3H11 0.31 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.47 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 79
Variovorax sp. SCN45 0.30 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.47 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0796 NAD-dependent protein deacetylases, SIR2 family 0.60 B158DRAFT_1951 tRNA dimethylallyltransferase low > 40
Pseudomonas sp. S08-1 0.30 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.57 OH686_09475 tRNA dimethylallyltransferase low > 80
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS10995 NAD-dependent deacylase 0.49 ABZR87_RS00875 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18020 NAD-dependent deacylase 0.48 RPSI07_RS12065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 81
Pseudomonas putida KT2440 0.26 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.58 PP_4895 tRNA dimethylallyltransferase low > 96
Mycobacterium tuberculosis H37Rv 0.25 Rv1151c Transcriptional regulatory protein 0.21 Rv2727c Probable tRNA delta(2)-isopentenylpyrophosphate transferase MiaA (IPP transferase) (isopentenyl-diphosphate:tRNA isopentenyltransferase) (iptase) (IPPT) — —
Dechlorosoma suillum PS 0.18 Dsui_2796 NAD-dependent protein deacetylase, SIR2 family 0.49 Dsui_1552 tRNA isopentenyltransferase MiaA — —
Lysobacter sp. OAE881 0.16 ABIE51_RS09130 NAD-dependent protein deacetylase 0.47 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 62
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS05345 NAD-dependent protein deacetylase 0.52 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Bifidobacterium breve UCC2003 0.15 BBR_RS20125 SIR2 family protein 0.26 BBR_RS16565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Pseudomonas fluorescens SBW25 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.60 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.60 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_26795 NAD-dependent deacetylase 0.62 AO353_13140 tRNA dimethylallyltransferase low > 101

Not shown: 1 genomes with orthologs for CSW01_07575 only; 42 genomes with orthologs for CSW01_01830 only