Conservation of cofitness between CCNA_01416 and CCNA_03495 in Caulobacter crescentus NA1000

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 1.0 CCNA_01416 3-hydroxyisobutyrate dehydrogenase 1.0 CCNA_03495 D-beta-hydroxybutyrate dehydrogenase 0.66 4
Caulobacter crescentus NA1000 Δfur 1.00 CCNA_01416 3-hydroxyisobutyrate dehydrogenase 1.00 CCNA_03495 D-beta-hydroxybutyrate dehydrogenase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.76 A4249_RS03595 3-hydroxyisobutyrate dehydrogenase 0.69 A4249_RS06090 3-hydroxybutyrate dehydrogenase low > 48
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3686 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.56 Ga0059261_2771 3-hydroxybutyrate dehydrogenase 0.42 5
Bosea sp. OAE506 0.54 ABIE41_RS23930 3-hydroxyisobutyrate dehydrogenase 0.58 ABIE41_RS09040 3-hydroxybutyrate dehydrogenase low > 77
Rhizobium sp. OAE497 0.53 ABIE40_RS24830 3-hydroxyisobutyrate dehydrogenase 0.57 ABIE40_RS13735 3-hydroxybutyrate dehydrogenase 0.50 3
Magnetospirillum magneticum AMB-1 0.53 AMB_RS18155 3-hydroxyisobutyrate dehydrogenase 0.54 AMB_RS13470 3-hydroxybutyrate dehydrogenase low > 64
Azospirillum brasilense Sp245 0.52 AZOBR_RS22360 3-hydroxyisobutyrate dehydrogenase 0.54 AZOBR_RS16640 3-hydroxybutyrate dehydrogenase — —
Agrobacterium fabrum C58 0.50 Atu4129 3-hydroxyisobutyrate dehydrogenase 0.60 Atu2308 d-beta-hydroxybutyrate dehydrogenase low > 89
Sinorhizobium meliloti 1021 0.49 SM_b20751 3-hydroxyisobutyrate dehydrogenase 0.58 SM_b21010 D-beta-hydroxybutyrate dehydrogenase low > 103
Rhodopseudomonas palustris CGA009 0.49 TX73_017835 3-hydroxyisobutyrate dehydrogenase 0.59 TX73_021805 3-hydroxybutyrate dehydrogenase low > 86
Alteromonas macleodii MIT1002 0.48 MIT1002_03327 3-hydroxyisobutyrate dehydrogenase 0.36 MIT1002_01448 D-beta-hydroxybutyrate dehydrogenase low > 70
Phaeobacter inhibens DSM 17395 0.47 PGA1_c17360 3-hydroxyisobutyrate dehydrogenase MmsB 0.50 PGA1_c15020 D-beta-hydroxybutyrate dehydrogenase BdhA low > 62
Azospirillum sp. SherDot2 0.46 MPMX19_05421 putative 3-hydroxyisobutyrate dehydrogenase 0.53 MPMX19_05363 D-beta-hydroxybutyrate dehydrogenase low > 112
Rhodospirillum rubrum S1H 0.43 Rru_A1833 3-hydroxyisobutyrate dehydrogenase (NCBI) 0.47 Rru_A1057 3-hydroxybutyrate dehydrogenase (NCBI) low > 58
Pseudomonas stutzeri RCH2 0.42 Psest_2438 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.51 Psest_3522 3-hydroxybutyrate dehydrogenase low > 67
Marinobacter adhaerens HP15 0.42 HP15_910 3-hydroxyisobutyrate dehydrogenase 0.31 HP15_3798 3-hydroxybutyrate dehydrogenase low > 73
Castellaniella sp019104865 MT123 0.41 ABCV34_RS12490 3-hydroxyisobutyrate dehydrogenase 0.50 ABCV34_RS01165 3-hydroxybutyrate dehydrogenase low > 48
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2362 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.51 Ac3H11_360 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) low > 79
Pseudomonas putida KT2440 0.41 PP_4666 3-hydroxyisobutyrate dehydrogenase 0.49 PP_3073 3-hydroxybutyrate dehydrogenase low > 96
Variovorax sp. SCN45 0.41 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.54 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) low > 127
Dinoroseobacter shibae DFL-12 0.40 Dshi_1752 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.50 Dshi_1544 3-hydroxybutyrate dehydrogenase (RefSeq) low > 64
Pseudomonas fluorescens SBW25 0.40 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.51 PFLU_RS12840 3-hydroxybutyrate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.51 PFLU_RS12840 3-hydroxybutyrate dehydrogenase low > 109
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS17475 3-hydroxyisobutyrate dehydrogenase 0.56 ABZR87_RS13760 3-hydroxybutyrate dehydrogenase low > 80
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15390 3-hydroxyisobutyrate dehydrogenase 0.32 HSERO_RS06265 3-hydroxybutyrate dehydrogenase low > 78
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1228 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.51 Pf1N1B4_5633 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) — —
Paraburkholderia graminis OAS925 0.39 ABIE53_005735 3-hydroxyisobutyrate dehydrogenase 0.39 ABIE53_005629 3-hydroxybutyrate dehydrogenase low > 113
Shewanella amazonensis SB2B 0.39 Sama_1380 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.44 Sama_0517 D-beta-hydroxybutyrate dehydrogenase (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS12390 3-hydroxyisobutyrate dehydrogenase 0.36 QEN71_RS37110 SDR family oxidoreductase low > 153
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS28025 3-hydroxyisobutyrate dehydrogenase 0.32 BPHYT_RS11930 3-hydroxybutyrate dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_07865 3-hydroxyisobutyrate dehydrogenase 0.50 AO356_00420 3-hydroxybutyrate dehydrogenase low > 104
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_01201 3-hydroxyisobutyrate dehydrogenase 0.30 H281DRAFT_04976 3-hydroxybutyrate dehydrogenase low > 103
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_5145 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.50 PfGW456L13_2873 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) low > 87
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_05985 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) 0.50 AO353_21770 3-hydroxybutyrate dehydrogenase 0.28 44
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.3685.1 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.39 Xcc-8004.2418.1 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) low > 74
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3451 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.50 Pf6N2E2_2041 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) low > 103
Pseudomonas sp. RS175 0.39 PFR28_00014 3-hydroxyisobutyrate dehydrogenase 0.51 PFR28_01395 D-beta-hydroxybutyrate dehydrogenase low > 88
Variovorax sp. OAS795 0.38 ABID97_RS19405 3-hydroxyisobutyrate dehydrogenase 0.55 ABID97_RS17250 3-hydroxybutyrate dehydrogenase low > 91
Pseudomonas simiae WCS417 0.38 PS417_23720 3-hydroxyisobutyrate dehydrogenase 0.51 PS417_12150 3-hydroxybutyrate dehydrogenase — —
Shewanella sp. ANA-3 0.38 Shewana3_2766 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.44 Shewana3_3466 short-chain dehydrogenase/reductase SDR (RefSeq) low > 73
Ralstonia solanacearum PSI07 0.38 RPSI07_RS02325 3-hydroxyisobutyrate dehydrogenase 0.55 RPSI07_RS15670 3-hydroxybutyrate dehydrogenase low > 81
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS25640 3-hydroxyisobutyrate dehydrogenase 0.56 RR42_RS06570 3-hydroxybutyrate dehydrogenase low > 128
Ralstonia solanacearum UW163 0.37 UW163_RS18760 3-hydroxyisobutyrate dehydrogenase 0.54 UW163_RS15130 3-hydroxybutyrate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS20415 3-hydroxyisobutyrate dehydrogenase 0.54 RALBFv3_RS01820 3-hydroxybutyrate dehydrogenase low > 76
Pseudomonas sp. S08-1 0.36 OH686_05885 3-hydroxyisobutyrate dehydrogenase 0.53 OH686_00815 3-hydroxybutyrate dehydrogenase low > 80
Ralstonia solanacearum GMI1000 0.36 RS_RS20225 3-hydroxyisobutyrate dehydrogenase 0.55 RS_RS07915 3-hydroxybutyrate dehydrogenase low > 80
Enterobacter sp. TBS_079 0.22 MPMX20_04587 3-sulfolactaldehyde reductase 0.47 MPMX20_01908 D-beta-hydroxybutyrate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4360 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 0.49 EX28DRAFT_1712 3-hydroxybutyrate dehydrogenase low > 76

Not shown: 6 genomes with orthologs for CCNA_01416 only; 11 genomes with orthologs for CCNA_03495 only