Conservation of cofitness between BPHYT_RS11995 and BPHYT_RS18610 in Burkholderia phytofirmans PsJN

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS11995 flagellar hook protein FlgE 1.0 BPHYT_RS18610 lytic transglycosylase 0.25 17
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS39330 flagellar hook protein FlgE 0.89 QEN71_RS28635 lytic transglycosylase domain-containing protein low > 153
Variovorax sp. SCN45 0.39 GFF5718 Flagellar hook protein FlgE 0.30 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) low > 127
Dickeya dadantii 3937 0.39 DDA3937_RS13465 flagellar hook protein FlgE 0.15 DDA3937_RS18455 murein transglycosylase low > 74
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS21725 flagellar hook protein FlgE 0.52 RALBFv3_RS09860 lytic transglycosylase low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS17460 flagellar hook protein FlgE 0.52 UW163_RS03720 lytic transglycosylase — —
Ralstonia solanacearum GMI1000 0.38 RS_RS18810 flagellar hook protein FlgE 0.52 RS_RS00445 lytic transglycosylase low > 80
Dechlorosoma suillum PS 0.37 Dsui_1735 flagellar hook-basal body proteins 0.36 Dsui_0683 soluble lytic murein transglycosylase-like protein low > 51
Ralstonia solanacearum PSI07 0.37 RPSI07_RS01405 flagellar hook protein FlgE 0.52 RPSI07_RS23510 lytic transglycosylase low > 81
Dickeya dianthicola ME23 0.37 DZA65_RS13995 flagellar hook protein FlgE 0.14 DZA65_RS19525 murein transglycosylase low > 75
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS10195 flagellar hook protein FlgE 0.45 HSERO_RS21415 lytic transglycosylase low > 78
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS22275 flagellar hook protein FlgE 0.52 ABZR87_RS04885 lytic transglycosylase domain-containing protein low > 80
Dickeya dianthicola 67-19 0.36 HGI48_RS13510 flagellar hook protein FlgE 0.14 HGI48_RS18385 murein transglycosylase low > 71
Serratia liquefaciens MT49 0.35 IAI46_15945 flagellar hook protein FlgE 0.12 IAI46_02985 murein transglycosylase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2781.1 Flagellar hook protein FlgE 0.13 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 74
Rahnella sp. WP5 0.35 EX31_RS11300 flagellar hook protein FlgE 0.13 EX31_RS03985 murein transglycosylase low > 89
Pectobacterium carotovorum WPP14 0.34 HER17_RS08180 flagellar hook protein FlgE 0.13 HER17_RS02750 murein transglycosylase low > 75
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1374 Flagellar hook protein FlgE 0.30 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF3357 Flagellar hook protein FlgE 0.13 GFF1060 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 78
Escherichia fergusonii Becca 0.33 EFB2_02898 Flagellar hook protein FlgE 0.13 EFB2_04052 Soluble lytic murein transglycosylase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_02589 Flagellar hook protein FlgE 0.13 OHPLBJKB_03669 Soluble lytic murein transglycosylase low > 73
Enterobacter asburiae PDN3 0.33 EX28DRAFT_1856 flagellar hook-basal body protein 0.13 EX28DRAFT_3602 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Escherichia coli BW25113 0.33 b1076 flgE flagellar hook protein E (NCBI) 0.13 b4392 slt soluble lytic murein transglycosylase (VIMSS) low > 76
Pseudomonas sp. S08-1 0.33 OH686_02960 Flagellar hook protein FlgE 0.16 OH686_21900 Soluble lytic murein transglycosylase low > 80
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.16 Psyr_3295 SLT low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.16 Psyr_3295 SLT low > 86
Enterobacter sp. TBS_079 0.33 MPMX20_01755 Flagellar hook protein FlgE 0.13 MPMX20_00699 Soluble lytic murein transglycosylase low > 85
Lysobacter sp. OAE881 0.33 ABIE51_RS16685 flagellar hook protein FlgE 0.13 ABIE51_RS19070 transglycosylase SLT domain-containing protein low > 62
Erwinia tracheiphila SCR3 0.33 LU632_RS10410 flgE flagellar hook protein FlgE 0.13 LU632_RS02575 sltY murein transglycosylase low > 74
Escherichia coli ECRC62 0.33 BNILDI_19350 flgE flagellar hook protein FlgE 0.13 BNILDI_08095 sltY murein transglycosylase low > 75
Escherichia coli ECRC102 0.33 NIAGMN_24170 flgE flagellar hook protein FlgE 0.13 NIAGMN_09020 sltY murein transglycosylase — —
Escherichia coli ECRC100 0.33 OKFHMN_03660 flgE flagellar hook protein FlgE 0.13 OKFHMN_11170 sltY murein transglycosylase low > 80
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS35710 flagellar hook protein FlgE 0.50 RR42_RS01405 lytic transglycosylase low > 128
Escherichia coli ECRC98 0.33 JDDGAC_07320 flgE flagellar hook protein FlgE 0.13 JDDGAC_14765 sltY murein transglycosylase low > 86
Escherichia coli BL21 0.33 ECD_01072 flagellar hook protein 0.13 ECD_04268 lytic murein transglycosylase, soluble low > 61
Escherichia coli ECOR27 0.33 NOLOHH_21190 flgE flagellar hook protein FlgE 0.13 NOLOHH_03500 sltY murein transglycosylase low > 75
Escherichia coli ECRC101 0.33 MCAODC_23020 flgE flagellar hook protein FlgE 0.13 MCAODC_01685 sltY murein transglycosylase low > 87
Escherichia coli ECRC99 0.33 KEDOAH_24095 flgE flagellar hook protein FlgE 0.13 KEDOAH_16985 sltY murein transglycosylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF1412 Flagellar hook protein FlgE 0.27 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 90
Escherichia coli Nissle 1917 0.32 ECOLIN_RS06230 flagellar hook protein FlgE 0.13 ECOLIN_RS25210 murein transglycosylase — —
Escherichia coli ECOR38 0.32 HEPCGN_23830 flgE flagellar hook protein FlgE 0.13 HEPCGN_09175 sltY murein transglycosylase low > 87
Pseudomonas putida KT2440 0.32 PP_4388 Flagellar hook protein FlgE 0.16 PP_2130 putative Soluble lytic transglycosylase low > 96
Pseudomonas sp. RS175 0.31 PFR28_03251 Flagellar hook protein FlgE 0.17 PFR28_01106 Soluble lytic murein transglycosylase low > 88
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS20090 flagellar hook protein FlgE 0.14 ABZR86_RS12745 transglycosylase SLT domain-containing protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5697 Flagellar hook protein FlgE 0.17 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_02845 flagellar biosynthesis protein FlgE 0.16 AO353_00530 lytic transglycosylase low > 101
Pseudomonas stutzeri RCH2 0.31 Psest_4150 fagellar hook-basal body proteins 0.17 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 67
Pantoea sp. MT58 0.30 IAI47_12150 flagellar hook protein FlgE 0.13 IAI47_16260 murein transglycosylase low > 76
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_18930 flagellar biosynthesis protein FlgE 0.17 AO356_02350 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_3475 Flagellar hook protein FlgE 0.17 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Rhodanobacter denitrificans MT42 0.30 LRK55_RS13160 flagellar hook protein FlgE 0.14 LRK55_RS06980 transglycosylase SLT domain-containing protein low > 63
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_2004 Flagellar hook protein FlgE 0.16 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) low > 87
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS13420 flagellar hook protein FlgE 0.14 LRK54_RS07245 transglycosylase SLT domain-containing protein low > 59
Pseudomonas simiae WCS417 0.29 PS417_21555 flagellar hook protein FlgE 0.17 PS417_07550 lytic transglycosylase low > 88
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_02665 flgE flagellar hook protein FlgE 0.14 OKGIIK_16395 Lytic transglycosylase low > 52
Pseudomonas fluorescens SBW25 0.28 PFLU_RS23165 flagellar hook protein FlgE 0.17 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS23165 flagellar hook protein FlgE 0.17 PFLU_RS07630 transglycosylase SLT domain-containing protein low > 109
Shewanella loihica PV-4 0.27 Shew_1348 flgE flagellar hook protein FlgE (RefSeq) 0.13 Shew_2125 lytic transglycosylase, catalytic (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_1324 flgE flagellar hook protein FlgE (RefSeq) 0.12 Shewana3_2236 lytic transglycosylase, catalytic (RefSeq) low > 73
Shewanella oneidensis MR-1 0.27 SO3247 flgE flagellar hook protein FlgE (NCBI ptt file) 0.12 SO2040 soluble lytic murein transglycosylase, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.26 Sama_2315 flgE flagellar hook protein FlgE (RefSeq) 0.10 Sama_1895 soluble lytic murein transglycosylase, putative (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_11210 flagellar hook protein FlgE 0.12 CSW01_03655 murein transglycosylase low > 62

Not shown: 15 genomes with orthologs for BPHYT_RS11995 only; 6 genomes with orthologs for BPHYT_RS18610 only