Conservation of cofitness between BPHYT_RS16490 and BPHYT_RS15715 in Burkholderia phytofirmans PsJN

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16490 glycerol-3-phosphate dehydrogenase 1.0 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS 0.32 9
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_04228 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 1.00 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS low > 103
Paraburkholderia graminis OAS925 0.90 ABIE53_003468 glycerol-3-phosphate dehydrogenase 1.00 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS low > 113
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS02235 glycerol-3-phosphate dehydrogenase 0.97 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS — —
Azospirillum sp. SherDot2 0.59 MPMX19_05967 D-erythritol 1-phosphate dehydrogenase 0.56 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS low > 112
Variovorax sp. OAS795 0.58 ABID97_RS19955 glycerol-3-phosphate dehydrogenase 0.71 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS low > 91
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS04840 glycerol-3-phosphate dehydrogenase 0.81 HSERO_RS07025 ATP-dependent Clp protease ClpS — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS03020 glycerol-3-phosphate dehydrogenase 0.82 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS low > 80
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS20025 glycerol-3-phosphate dehydrogenase 0.50 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS low > 74
Ralstonia solanacearum PSI07 0.55 RPSI07_RS09885 glycerol-3-phosphate dehydrogenase 0.82 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS low > 81
Ralstonia solanacearum GMI1000 0.54 RS_RS15300 glycerol-3-phosphate dehydrogenase 0.83 RS_RS12375 ATP-dependent Clp protease adaptor ClpS low > 80
Ralstonia solanacearum UW163 0.54 UW163_RS06260 glycerol-3-phosphate dehydrogenase 0.82 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS07360 glycerol-3-phosphate dehydrogenase 0.82 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS low > 76
Azospirillum brasilense Sp245 0.53 AZOBR_RS25870 glycerol-3-phosphate dehydrogenase 0.50 AZOBR_RS05180 Clp protease ClpS low > 97
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.53 Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3907 homodimeric glycerol 3-phosphate dehydrogenase (quinone) 0.53 Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_18235 glycerol-3-phosphate dehydrogenase 0.54 AO356_22145 ATP-dependent Clp protease adaptor ClpS — —
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_04190 glycerol-3-phosphate dehydrogenase 0.54 AO353_27680 ATP-dependent Clp protease adaptor ClpS low > 101
Rhodopseudomonas palustris CGA009 0.48 TX73_022860 glycerol-3-phosphate dehydrogenase 0.51 TX73_016275 ATP-dependent Clp protease adapter ClpS low > 86
Pseudomonas simiae WCS417 0.48 PS417_05565 glycerol-3-phosphate dehydrogenase 0.54 PS417_16515 Clp protease ClpS — —
Pseudomonas fluorescens SBW25 0.48 PFLU_RS05650 glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS low > 109
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS05650 glycerol-3-phosphate dehydrogenase 0.53 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS — —
Agrobacterium fabrum C58 0.48 Atu3897 glycerol-3-phosphate dehydrogenase 0.54 Atu1363 ATP-dependent Clp protease adaptor protein ClpS — —
Pseudomonas sp. S08-1 0.48 OH686_20360 Aerobic glycerol-3-phosphate dehydrogenase 0.50 OH686_00230 ATP-dependent Clp protease adaptor protein ClpS — —
Pseudomonas putida KT2440 0.48 PP_1073 glycerol-3-phosphate dehydrogenase (aerobic) 0.53 PP_4009 ATP-dependent Clp protease adapter protein ClpS — —
Pseudomonas stutzeri RCH2 0.47 Psest_2775 Glycerol-3-phosphate dehydrogenase 0.52 Psest_2026 Uncharacterized conserved protein low > 67
Alteromonas macleodii MIT1002 0.47 MIT1002_00200 Aerobic glycerol-3-phosphate dehydrogenase 0.51 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS — —
Dickeya dadantii 3937 0.45 DDA3937_RS19720 glycerol-3-phosphate dehydrogenase 0.53 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS — —
Rahnella sp. WP5 0.44 EX31_RS05000 glycerol-3-phosphate dehydrogenase 0.53 EX31_RS18565 ATP-dependent Clp protease adapter ClpS low > 89
Dickeya dianthicola 67-19 0.44 HGI48_RS19815 glycerol-3-phosphate dehydrogenase 0.53 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS20905 glycerol-3-phosphate dehydrogenase 0.53 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS low > 75
Serratia liquefaciens MT49 0.44 IAI46_23915 glycerol-3-phosphate dehydrogenase 0.52 IAI46_08510 ATP-dependent Clp protease adapter ClpS low > 86
Pectobacterium carotovorum WPP14 0.44 HER17_RS01510 glycerol-3-phosphate dehydrogenase 0.53 HER17_RS12405 ATP-dependent Clp protease adapter ClpS — —
Erwinia tracheiphila SCR3 0.43 LU632_RS23020 glpD glycerol-3-phosphate dehydrogenase 0.51 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS — —
Pantoea sp. MT58 0.43 IAI47_01750 glycerol-3-phosphate dehydrogenase 0.54 IAI47_12950 ATP-dependent Clp protease adapter ClpS low > 76
Phaeobacter inhibens DSM 17395 0.43 PGA1_c08240 aerobic glycerol-3-phosphate dehydrogenase GlpD 0.47 PGA1_c30000 ATP-dependent Clp protease adaptor protein ClpS — —
Escherichia coli BL21 0.43 ECD_03277 sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding 0.53 ECD_00886 regulatory protein for ClpA substrate specificity low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00278 Aerobic glycerol-3-phosphate dehydrogenase 0.53 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS low > 73
Escherichia coli BW25113 0.43 b3426 glpD sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) 0.53 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Escherichia coli ECOR27 0.43 NOLOHH_08720 glpD glycerol-3-phosphate dehydrogenase 0.53 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli ECRC62 0.43 BNILDI_02795 glpD glycerol-3-phosphate dehydrogenase 0.53 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS low > 75
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4120 Glycerol-3-phosphate dehydrogenase 0.52 EX28DRAFT_2051 Uncharacterized conserved protein 0.64 74
Escherichia coli ECOR38 0.43 HEPCGN_15745 glpD glycerol-3-phosphate dehydrogenase 0.53 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC100 0.43 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.53 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS low > 80
Escherichia coli ECRC101 0.43 MCAODC_07455 glpD glycerol-3-phosphate dehydrogenase 0.53 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC102 0.43 NIAGMN_14695 glpD glycerol-3-phosphate dehydrogenase 0.53 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC99 0.43 KEDOAH_11215 glpD glycerol-3-phosphate dehydrogenase 0.53 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC98 0.43 JDDGAC_20555 glpD glycerol-3-phosphate dehydrogenase 0.53 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS low > 86
Escherichia fergusonii Becca 0.42 EFB2_00403 Aerobic glycerol-3-phosphate dehydrogenase 0.53 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Escherichia coli Nissle 1917 0.42 ECOLIN_RS19555 glycerol-3-phosphate dehydrogenase 0.53 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS low > 55
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_17495 glycerol-3-phosphate dehydrogenase 0.55 CSW01_05800 ATP-dependent Clp protease adaptor ClpS low > 62
Enterobacter sp. TBS_079 0.41 MPMX20_04309 Aerobic glycerol-3-phosphate dehydrogenase 0.52 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF587 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.53 GFF4902 ATP-dependent Clp protease adaptor protein ClpS low > 78
Klebsiella michiganensis M5al 0.41 BWI76_RS26190 glycerol-3-phosphate dehydrogenase 0.53 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS low > 92
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_0811 FAD dependent oxidoreductase (RefSeq) 0.43 DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 51
Acidovorax sp. GW101-3H11 0.19 Ac3H11_797 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.66 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS — —
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU3132 glycerol-3-phosphate dehydrogenase, FAD-dependent (TIGR) 0.44 DVU1601 ATP-dependent Clp protease adaptor protein ClpS (TIGR) 0.20 36
Cupriavidus basilensis FW507-4G11 0.17 RR42_RS13815 FAD-dependent oxidoreductase 0.84 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS — —
Castellaniella sp019104865 MT123 0.17 ABCV34_RS05860 glycerol-3-phosphate dehydrogenase/oxidase 0.53 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS — —
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS15405 glycerol-3-phosphate dehydrogenase/oxidase 0.51 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS low > 59
Rhodanobacter denitrificans MT42 0.16 LRK55_RS15125 glycerol-3-phosphate dehydrogenase/oxidase 0.50 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS low > 63

Not shown: 15 genomes with orthologs for BPHYT_RS16490 only; 13 genomes with orthologs for BPHYT_RS15715 only