| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS14785 | | AsnC family transcriptional regulator | 1.0 | BPHYT_RS14790 | | D-amino acid dehydrogenase | 0.80 | 1 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.99 | H281DRAFT_04288 | | transcriptional regulator, AsnC family | 0.94 | H281DRAFT_04287 | | D-amino-acid dehydrogenase | 0.55 | 1 |
| Paraburkholderia graminis OAS925 | 0.98 | ABIE53_003132 | | Lrp/AsnC family leucine-responsive transcriptional regulator | 0.94 | ABIE53_003133 | | D-amino-acid dehydrogenase | 0.84 | 1 |
| Paraburkholderia sabiae LMG 24235 | 0.94 | QEN71_RS04195 | | Lrp/AsnC ligand binding domain-containing protein | 0.90 | QEN71_RS04190 | | D-amino acid dehydrogenase | 0.67 | 2 |
| Herbaspirillum seropedicae SmR1 | 0.84 | HSERO_RS08380 | | AsnC family transcriptional regulator | 0.77 | HSERO_RS08375 | | D-amino acid dehydrogenase small subunit | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.83 | RR42_RS04590 | | AsnC family transcriptional regulator | 0.73 | RR42_RS04585 | | amino acid dehydrogenase | 0.88 | 1 |
| Ralstonia sp. UNC404CL21Col | 0.82 | ABZR87_RS09565 | | Lrp/AsnC ligand binding domain-containing protein | 0.74 | ABZR87_RS09560 | | D-amino acid dehydrogenase | 0.82 | 1 |
| Ralstonia solanacearum IBSBF1503 | 0.82 | RALBFv3_RS13875 | | AsnC family transcriptional regulator | 0.75 | RALBFv3_RS13870 | | D-amino acid dehydrogenase small subunit | 0.39 | 15 |
| Ralstonia solanacearum UW163 | 0.82 | UW163_RS15935 | | AsnC family transcriptional regulator | 0.75 | UW163_RS15940 | | D-amino acid dehydrogenase small subunit | — | — |
| Ralstonia solanacearum PSI07 | 0.81 | RPSI07_RS19595 | | AsnC family transcriptional regulator | 0.75 | RPSI07_RS19600 | | D-amino acid dehydrogenase small subunit | 0.64 | 18 |
| Ralstonia solanacearum GMI1000 | 0.79 | RS_RS04610 | | AsnC family transcriptional regulator | 0.75 | RS_RS04605 | | D-amino acid dehydrogenase small subunit | 0.86 | 1 |
| Pseudomonas sp. S08-1 | 0.72 | OH686_13680 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.67 | OH686_13685 | | D-amino acid dehydrogenase | 0.74 | 3 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.66 | Psyr_0235 | | D-amino acid dehydrogenase small subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_0234 | | transcriptional regulator, AsnC family | 0.66 | Psyr_0235 | | D-amino acid dehydrogenase small subunit | 0.32 | 44 |
| Pseudomonas putida KT2440 | 0.71 | PP_5271 | | DNA-binding transcriptional dual regulator, leucine-binding | 0.66 | PP_5270 | | D-amino-acid:quinone oxidoreductase (deaminating) | 0.58 | 1 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_811 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.67 | PfGW456L13_812 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | 0.77 | 1 |
| Pseudomonas sp. RS175 | 0.70 | PFR28_04400 | | Leucine-responsive regulatory protein | 0.67 | PFR28_04399 | | D-amino acid dehydrogenase 1 | 0.47 | 1 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.68 | PFLU_RS29380 | | D-amino acid dehydrogenase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS29385 | | AsnC family transcriptional regulator | 0.68 | PFLU_RS29380 | | D-amino acid dehydrogenase | 0.70 | 2 |
| Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_09160 | | AsnC family transcriptional regulator | 0.67 | AO353_09155 | | amino acid dehydrogenase | 0.72 | 1 |
| Pseudomonas fluorescens FW300-N1B4 | 0.70 | Pf1N1B4_2143 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.67 | Pf1N1B4_2144 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | 0.67 | 1 |
| Pseudomonas simiae WCS417 | 0.70 | PS417_27710 | | AsnC family transcriptional regulator | 0.67 | PS417_27705 | | amino acid dehydrogenase | 0.72 | 1 |
| Pseudomonas fluorescens FW300-N2C3 | 0.70 | AO356_12615 | | AsnC family transcriptional regulator | 0.67 | AO356_12620 | | amino acid dehydrogenase | 0.87 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.70 | Pf6N2E2_4390 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.68 | Pf6N2E2_4391 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | 0.74 | 1 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS10805 | | winged helix-turn-helix transcriptional regulator | 0.64 | ABCV34_RS10810 | | D-amino acid dehydrogenase | low | > 48 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_3794 | | Transcriptional regulators | 0.66 | Psest_3793 | | D-alanine dehydrogenase (EC 1.4.99.-) (from data) | 0.94 | 1 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.68 | Xcc-8004.4622.1 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.61 | Xcc-8004.4621.1 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS00595 | | winged helix-turn-helix transcriptional regulator | 0.64 | LRK54_RS00590 | | D-amino acid dehydrogenase | 0.65 | 1 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS00365 | | winged helix-turn-helix transcriptional regulator | 0.64 | LRK55_RS00360 | | D-amino acid dehydrogenase | 0.64 | 25 |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_06660 | lrp | AsnC family transcriptional regulator | 0.64 | OKGIIK_06665 | dadA | D-amino acid dehydrogenase small subunit | low | > 52 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS22380 | | winged helix-turn-helix transcriptional regulator | 0.64 | ABID97_RS22385 | | D-amino acid dehydrogenase | 0.81 | 1 |
| Variovorax sp. SCN45 | 0.63 | GFF1774 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.63 | GFF1773 | | D-amino acid dehydrogenase (EC 1.4.99.6) | 0.91 | 4 |
| Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_09530 | | leucine-responsive transcriptional regulator Lrp | 0.55 | CSW01_04065 | | D-amino acid dehydrogenase small subunit | — | — |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS12360 | | leucine-responsive transcriptional regulator Lrp | 0.69 | HER17_RS11170 | | D-amino acid dehydrogenase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS09605 | | leucine-responsive transcriptional regulator Lrp | 0.69 | HGI48_RS11195 | | D-amino acid dehydrogenase | low | > 71 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS09590 | | leucine-responsive transcriptional regulator Lrp | 0.68 | DDA3937_RS11170 | | D-amino acid dehydrogenase | low | > 74 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS09915 | | leucine-responsive transcriptional regulator Lrp | 0.69 | DZA65_RS11540 | | D-amino acid dehydrogenase | low | > 75 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS09655 | | leucine-responsive regulatory protein | 0.74 | BWI76_RS17735 | | D-amino acid dehydrogenase small subunit | low | > 92 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_2043 | | transcriptional regulator, AsnC family | 0.75 | EX28DRAFT_0766 | | Glycine/D-amino acid oxidases (deaminating) | low | > 76 |
| Escherichia fergusonii Becca | 0.55 | EFB2_03172 | | Leucine-responsive regulatory protein | 0.75 | EFB2_02743 | | D-amino acid dehydrogenase | low | > 86 |
| Pantoea sp. MT58 | 0.55 | IAI47_12915 | | leucine-responsive transcriptional regulator Lrp | 0.76 | IAI47_08890 | | D-amino acid dehydrogenase | low | > 76 |
| Rahnella sp. WP5 | 0.55 | EX31_RS18530 | | leucine-responsive transcriptional regulator Lrp | 0.75 | EX31_RS10485 | | D-amino acid dehydrogenase | low | > 89 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_05575 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | OKFHMN_28290 | dadA | D-amino acid dehydrogenase | — | — |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_01551 | | Leucine-responsive regulatory protein | 0.74 | MPMX20_02699 | | D-amino acid dehydrogenase | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.55 | LU632_RS09740 | lrp | leucine-responsive transcriptional regulator Lrp | 0.70 | LU632_RS13070 | | D-amino acid dehydrogenase | low | > 74 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_22160 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | KEDOAH_25305 | dadA | D-amino acid dehydrogenase | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_09385 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | JDDGAC_06220 | dadA | D-amino acid dehydrogenase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_22145 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | NOLOHH_20725 | dadA | D-amino acid dehydrogenase | low | > 75 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_22935 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | HEPCGN_24750 | dadA | D-amino acid dehydrogenase | low | > 87 |
| Escherichia coli BW25113 | 0.55 | b0889 | lrp | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | 0.75 | b1189 | dadA | D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS04730 | | leucine-responsive transcriptional regulator Lrp | 0.75 | ECOLIN_RS07185 | | D-amino acid dehydrogenase | — | — |
| Escherichia coli BL21 | 0.55 | ECD_00893 | | leucine-responsive global transcriptional regulator | 0.75 | ECD_01164 | | D-amino acid dehydrogenase | low | > 61 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_20400 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | BNILDI_18890 | dadA | D-amino acid dehydrogenase | low | > 75 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_24965 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | MCAODC_21880 | dadA | D-amino acid dehydrogenase | low | > 87 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_03295 | lrp | leucine-responsive transcriptional regulator Lrp | 0.75 | NIAGMN_27930 | dadA | D-amino acid dehydrogenase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF4893 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.74 | GFF2804 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | low | > 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_02779 | | Leucine-responsive regulatory protein | 0.75 | OHPLBJKB_02500 | | D-amino acid dehydrogenase | low | > 73 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_08555 | | leucine-responsive transcriptional regulator Lrp | 0.75 | IAI46_14460 | | D-amino acid dehydrogenase | low | > 86 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_2849 | | PutR, transcriptional activator of PutA and PutP | 0.39 | Ac3H11_832 | | D-amino acid dehydrogenase small subunit (EC 1.4.99.1) | low | > 79 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS23685 | | AsnC family transcriptional regulator | 0.60 | AZOBR_RS08020 | | D-alanine dehydrogenase (EC 1.4.99.-) (from data) | low | > 97 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.51 | A4249_RS13055 | | Lrp/AsnC ligand binding domain-containing protein | 0.58 | A4249_RS08770 | | D-amino acid dehydrogenase | low | > 48 |
| Rhodospirillum rubrum S1H | 0.47 | Rru_A0655 | | Transcriptional Regulator, AsnC family (NCBI) | 0.38 | Rru_A1546 | | FAD dependent oxidoreductase (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_03947 | | Leucine-responsive regulatory protein | 0.60 | MPMX19_06097 | | D-amino acid dehydrogenase 1 | low | > 112 |
| Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01467 | | Leucine-responsive regulatory protein | 0.70 | MPMX26_01248 | | D-amino acid dehydrogenase | low | > 36 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_2690 | | transcriptional regulator, AsnC family | 0.39 | HP15_2610 | | D-amino acid dehydrogenase small subunit | low | > 73 |
| Agrobacterium fabrum C58 | 0.41 | Atu4159 | | AsnC family transcriptional regulator | 0.61 | Atu3293 | | D-amino acid dehydrogenase small subunit | low | > 89 |
Not shown: 14 genomes with orthologs for BPHYT_RS14785 only; 3 genomes with orthologs for BPHYT_RS14790 only