| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS15595 | | ABC transporter | 1.0 | BPHYT_RS12940 | | signal transduction histidine kinase | 0.25 | 18 |
| Paraburkholderia sabiae LMG 24235 | 0.93 | QEN71_RS03115 | | ABC transporter ATP-binding protein | 0.92 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.93 | H281DRAFT_04060 | | amino acid/amide ABC transporter ATP-binding protein 1, HAAT family | 0.97 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.91 | ABIE53_003283 | | branched-chain amino acid transport system ATP-binding protein | 0.96 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.89 | ABCV34_RS10515 | | ABC transporter ATP-binding protein | 0.32 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | low | > 48 |
| Ralstonia solanacearum PSI07 | 0.81 | RPSI07_RS12705 | | ABC transporter ATP-binding protein | 0.62 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.81 | RALBFv3_RS04680 | | ABC transporter ATP-binding protein | 0.62 | RALBFv3_RS15535 | | PAS domain-containing sensor histidine kinase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.81 | RR42_RS16965 | | ABC transporter | 0.61 | RR42_RS12985 | | histidine kinase | 0.69 | 7 |
| Ralstonia solanacearum UW163 | 0.81 | UW163_RS08990 | | ABC transporter ATP-binding protein | 0.62 | UW163_RS12995 | | PAS domain-containing sensor histidine kinase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.81 | ABZR87_RS00300 | | ABC transporter ATP-binding protein | 0.61 | ABZR87_RS11065 | | nitrogen regulation protein NR(II) | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.80 | RS_RS12240 | | ABC transporter ATP-binding protein | 0.61 | RS_RS06315 | | PAS domain-containing sensor histidine kinase | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF780 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.50 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.73 | Ac3H11_1693 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 1 (from data) | 0.50 | Ac3H11_4431 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.48 | 18 |
| Variovorax sp. OAS795 | 0.72 | ABID97_RS07850 | | ABC transporter ATP-binding protein | 0.49 | ABID97_RS09940 | | nitrogen regulation protein NR(II) | low | > 91 |
| Variovorax sp. SCN45 | 0.72 | GFF6031 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) | 0.49 | GFF3067 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.73 | 107 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_13095 | | ABC transporter ATP-binding protein | 0.30 | IAI46_24955 | | nitrogen regulation protein NR(II) | low | > 86 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS07270 | | ABC transporter ATP-binding protein | 0.30 | BWI76_RS00390 | | two-component system sensor histidine kinase NtrB | low | > 92 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_1076 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.29 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | low | > 76 |
| Dechlorosoma suillum PS | 0.61 | Dsui_0627 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.42 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | low | > 51 |
| Azospirillum sp. SherDot2 | 0.49 | MPMX19_02064 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.21 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | low | > 112 |
| Dickeya dadantii 3937 | 0.48 | DDA3937_RS18210 | | ABC transporter ATP-binding protein | 0.29 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | low | > 74 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_2704 | | branched-chain amino acid ABC transporter, ATP-binding protein | 0.34 | HP15_426 | | signal transduction histidine kinase, nitrogen specific, NtrB | low | > 73 |
| Magnetospirillum magneticum AMB-1 | 0.47 | AMB_RS08465 | | ABC transporter ATP-binding protein | 0.21 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | — | — |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS32405 | | ABC transporter | 0.21 | AZOBR_RS14425 | | ATPase | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.46 | TX73_019720 | | ABC transporter ATP-binding protein | 0.23 | TX73_013415 | | nitrogen regulation protein NR(II) | low | > 86 |
| Pseudomonas putida KT2440 | 0.46 | PP_1138 | | branched chain amino acid transporter - ATP binding subunit | 0.33 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.34 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Rahnella sp. WP5 | 0.45 | EX31_RS14790 | | ABC transporter ATP-binding protein | 0.29 | EX31_RS15875 | | nitrogen regulation protein NR(II) | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_3848 | | L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein | 0.34 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | low | > 86 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_06600 | | leucine/isoleucine/valine transporter ATP-binding subunit | 0.34 | PS417_01640 | | histidine kinase | low | > 88 |
| Pantoea sp. MT58 | 0.45 | IAI47_01580 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | IAI47_00455 | | nitrogen regulation protein NR(II) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.45 | MPMX20_04331 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.29 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | 0.18 | 72 |
| Pectobacterium carotovorum WPP14 | 0.45 | HER17_RS00510 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.29 | HER17_RS21435 | | nitrogen regulation protein NR(II) | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF551 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.30 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 78 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_05335 | | ABC transporter ATP-binding protein | 0.34 | AO356_09725 | | histidine kinase | low | > 104 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.34 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS20715 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.29 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | low | > 71 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS06630 | | ABC transporter ATP-binding protein | 0.34 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | low | > 109 |
| Escherichia coli BW25113 | 0.44 | b3455 | livG | leucine/isoleucine/valine transporter subunit (NCBI) | 0.28 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.44 | MCAODC_07285 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECOR38 | 0.44 | HEPCGN_15575 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | low | > 87 |
| Escherichia coli ECRC102 | 0.44 | NIAGMN_14525 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli Nissle 1917 | 0.44 | ECOLIN_RS19760 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.44 | OHPLBJKB_00248 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.28 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | low | > 73 |
| Escherichia coli ECRC98 | 0.44 | JDDGAC_20385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | low | > 86 |
| Escherichia coli ECRC99 | 0.44 | KEDOAH_11385 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | — | — |
| Escherichia coli ECRC62 | 0.44 | BNILDI_02955 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli BL21 | 0.44 | ECD_03304 | | branched-chain amino acid ABC transporter ATPase | 0.28 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | low | > 61 |
| Escherichia fergusonii Becca | 0.44 | EFB2_00367 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.28 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | low | > 86 |
| Escherichia coli ECOR27 | 0.44 | NOLOHH_08550 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | low | > 75 |
| Escherichia coli ECRC100 | 0.44 | OKFHMN_16755 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.28 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | 0.56 | 45 |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_4610 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.34 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 87 |
| Agrobacterium fabrum C58 | 0.44 | Atu5525 | | ABC transporter nucleotide binding/ATPase (branched chain amino acid) | 0.21 | Atu1445 | | two component sensor kinase | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_1309 | | ABC-type branched-chain amino acid transport systems, ATPase component | 0.32 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.23 | 17 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_17110 | | ABC transporter ATP-binding protein | 0.34 | AO353_12150 | | histidine kinase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.44 | Pf6N2E2_2925 | | ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) | 0.34 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_3215 | | Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) | 0.34 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | — | — |
| Pseudomonas sp. RS175 | 0.44 | PFR28_00537 | | Lipopolysaccharide export system ATP-binding protein LptB | 0.34 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | low | > 88 |
| Erwinia tracheiphila SCR3 | 0.44 | LU632_RS19240 | livG | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG | 0.30 | LU632_RS22140 | glnL | nitrogen regulation protein NR(II) | low | > 74 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_04620 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivG | 0.36 | OH686_10635 | | Nitrogen regulation protein NtrB | low | > 80 |
| Bosea sp. OAE506 | 0.41 | ABIE41_RS20710 | | ABC transporter ATP-binding protein | 0.21 | ABIE41_RS16790 | | ATP-binding protein | — | — |
| Sinorhizobium meliloti 1021 | 0.41 | SMc01949 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein | 0.20 | SMc01042 | | nitrogen regulation protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS14705 | | ABC transporter ATP-binding protein | 0.22 | ABIE40_RS09085 | | nitrogen regulation protein NR(II) | 0.59 | 15 |
| Dinoroseobacter shibae DFL-12 | 0.40 | Dshi_0375 | | ABC transporter related (RefSeq) | 0.21 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.39 | PGA1_c32620 | | high-affinity branched-chain amino acid transport ATP-binding protein | 0.21 | PGA1_c14780 | | nitrogen regulation protein NtrB | — | — |
| Shewanella loihica PV-4 | 0.39 | Shew_2611 | | ABC transporter-related protein (RefSeq) | 0.28 | Shew_3560 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | low | > 60 |
Not shown: 4 genomes with orthologs for BPHYT_RS15595 only; 13 genomes with orthologs for BPHYT_RS12940 only