Conservation of cofitness between BPHYT_RS33780 and BPHYT_RS06400 in Burkholderia phytofirmans PsJN

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33780 glycogen branching protein 1.0 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.36 12
Paraburkholderia graminis OAS925 0.94 ABIE53_004826 1,4-alpha-glucan branching enzyme 0.95 ABIE53_001544 coproporphyrinogen III oxidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_06050 1,4-alpha-glucan branching enzyme 0.95 H281DRAFT_04520 coproporphyrinogen oxidase
Paraburkholderia sabiae LMG 24235 0.84 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB 0.88 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB 0.71 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase
Ralstonia solanacearum GMI1000 0.61 RS_RS18305 glycogen-branching enzyme 0.70 RS_RS11000 coproporphyrinogen III oxidase
Ralstonia solanacearum PSI07 0.61 RPSI07_RS00885 1,4-alpha-glucan branching protein GlgB 0.71 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas sp. RS175 0.60 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB 0.59 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase
Pseudomonas fluorescens SBW25 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.58 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.58 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas putida KT2440 0.60 PP_4058 1,4-alpha-glucan branching enzyme 0.58 PP_0073 Coproporphyrinogen-III oxidase, aerobic
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.59 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas simiae WCS417 0.60 PS417_12805 glycogen branching protein 0.58 PS417_00120 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_01245 glycogen branching protein 0.58 AO356_11310 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_22945 glycogen branching protein 0.58 AO353_10665 coproporphyrinogen III oxidase
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.59 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2491 glycogen branching enzyme 0.58 Psyr_0024 coproporphyrinogen oxidase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2491 glycogen branching enzyme 0.58 Psyr_0024 coproporphyrinogen oxidase
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12510 glycogen branching protein 0.70 HSERO_RS17765 coproporphyrinogen III oxidase
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.59 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.186.1 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.57 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Rhizobium sp. OAE497 0.57 ABIE40_RS30590 1,4-alpha-glucan branching protein GlgB 0.31 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase
Pseudomonas sp. S08-1 0.56 OH686_01540 1,4-alpha-glucan branching enzyme 0.62 OH686_12490 Coproporphyrinogen III oxidase, aerobic
Pseudomonas stutzeri RCH2 0.56 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.60 Psest_0028 Coproporphyrinogen III oxidase low > 67
Bosea sp. OAE506 0.54 ABIE41_RS01220 1,4-alpha-glucan branching protein GlgB 0.34 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase
Azospirillum brasilense Sp245 0.54 AZOBR_RS09455 glycogen branching protein 0.31 AZOBR_RS20735 coproporphyrinogen III oxidase
Azospirillum sp. SherDot2 0.54 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB 0.33 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase
Pectobacterium carotovorum WPP14 0.53 HER17_RS01485 1,4-alpha-glucan branching enzyme 0.63 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase low > 75
Pantoea sp. MT58 0.53 IAI47_01680 1,4-alpha-glucan branching enzyme 0.61 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase
Enterobacter sp. TBS_079 0.53 MPMX20_04314 1,4-alpha-glucan branching enzyme GlgB 0.62 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase low > 85
Escherichia coli Nissle 1917 0.53 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme 0.63 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase low > 55
Escherichia coli ECOR38 0.53 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme 0.63 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli ECRC102 0.53 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme 0.61 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia fergusonii Becca 0.53 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB 0.62 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase low > 86
Escherichia coli ECRC101 0.53 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme 0.61 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase low > 87
Escherichia coli BL21 0.53 ECD_03284 1,4-alpha-glucan branching enzyme 0.62 ECD_02336 coproporphyrinogen III oxidase low > 61
Escherichia coli ECRC62 0.53 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme 0.62 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Escherichia coli ECRC99 0.53 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme 0.61 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase
Escherichia coli BW25113 0.53 b3432 glgB glycogen branching enzyme (NCBI) 0.62 b2436 hemF coproporphyrinogen III oxidase (NCBI) low > 76
Escherichia coli ECRC100 0.53 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme 0.61 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB 0.62 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase low > 73
Escherichia coli ECRC98 0.52 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme 0.61 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.63 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) low > 78
Escherichia coli ECOR27 0.52 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme 0.62 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase low > 75
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4115 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.62 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) low > 76
Rahnella sp. WP5 0.52 EX31_RS05025 1,4-alpha-glucan branching enzyme 0.64 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase low > 89
Klebsiella michiganensis M5al 0.52 BWI76_RS26215 glycogen-branching enzyme 0.59 BWI76_RS20740 coproporphyrinogen III oxidase low > 92
Serratia liquefaciens MT49 0.52 IAI46_23940 1,4-alpha-glucan branching protein GlgB 0.59 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase low > 86
Dickeya dianthicola 67-19 0.52 HGI48_RS19855 1,4-alpha-glucan branching protein GlgB 0.61 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS20930 1,4-alpha-glucan branching protein GlgB 0.61 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase
Variovorax sp. OAS795 0.52 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB 0.65 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase
Variovorax sp. SCN45 0.51 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.65 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3)
Agrobacterium fabrum C58 0.50 Atu4077 glycogen branching protein 0.32 Atu2247 coproporphyrinogen III oxidase
Dickeya dadantii 3937 0.50 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB 0.61 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase
Sinorhizobium meliloti 1021 0.50 SMc03922 glycogen branching protein 0.30 SMc00180 coproporphyrinogen III oxidase
Rhodopseudomonas palustris CGA009 0.50 TX73_018885 1,4-alpha-glucan branching protein GlgB 0.31 TX73_007780 oxygen-dependent coproporphyrinogen oxidase
Shewanella oneidensis MR-1 0.49 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file) 0.61 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.48 Shew_1168 glycogen branching enzyme (RefSeq) 0.63 Shew_3729 coproporphyrinogen III oxidase (RefSeq) low > 60
Shewanella sp. ANA-3 0.48 Shewana3_2934 glycogen branching enzyme (RefSeq) 0.61 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.48 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq) 0.59 Sama_0050 coproporphyrinogen III oxidase (RefSeq) low > 62
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_1085 glgB glycogen branching enzyme 0.46 Synpcc7942_0674 hemF coproporphyrinogen III oxidase
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14125 1,4-alpha-glucan branching enzyme 0.61 CSW01_00275 coproporphyrinogen III oxidase
Alteromonas macleodii MIT1002 0.45 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB 0.58 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS12490 1,4-alpha-glucan branching protein GlgB 0.36 ABZR88_RS09505 oxygen-dependent coproporphyrinogen oxidase
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS02145 1,4-alpha-glucan branching enzyme 0.35 CA265_RS09350 coproporphyrinogen III oxidase

Not shown: 14 genomes with orthologs for BPHYT_RS33780 only; 22 genomes with orthologs for BPHYT_RS06400 only