| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu3290 | | phosphomethylpyrimidine kinase | 1.0 | Atu2015 | | aminotransferase | 0.82 | 8 |
| Sinorhizobium meliloti 1021 | 0.59 | SM_b20962 | | phoshomethylpyrimidine kinase | 0.78 | SMc04323 | | aminotransferase | low | > 103 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_0469 | | hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.27 | EX28DRAFT_2740 | | Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS06265 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.25 | HER17_RS00520 | | PLP-dependent aminotransferase family protein | low | > 75 |
| Klebsiella michiganensis M5al | 0.50 | BWI76_RS19375 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.27 | BWI76_RS24235 | | Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) | low | > 92 |
| Rahnella sp. WP5 | 0.50 | EX31_RS20390 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.27 | EX31_RS14780 | | PLP-dependent aminotransferase family protein | low | > 89 |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_03076 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.26 | MPMX20_03530 | | 2-aminoadipate transaminase | low | > 85 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_19100 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.26 | IAI46_00985 | | PLP-dependent aminotransferase family protein | low | > 87 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS08590 | thiD | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.08 | LU632_RS00055 | | valine--pyruvate transaminase | low | > 73 |
| Klebsiella pneumoniae MKP103 | 0.49 | KDGMDA_26425 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.27 | KDGMDA_05065 | | GntR family transcriptional regulator | low | > 95 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS15335 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.26 | DDA3937_RS00685 | | PLP-dependent aminotransferase family protein | low | > 74 |
| Bosea sp. OAE506 | 0.48 | ABIE41_RS21620 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.23 | ABIE41_RS13895 | | PLP-dependent aminotransferase family protein | — | — |
| Dickeya dianthicola 67-19 | 0.48 | HGI48_RS15410 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.26 | HGI48_RS20705 | | PLP-dependent aminotransferase family protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.48 | DZA65_RS16235 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.27 | DZA65_RS21720 | | PLP-dependent aminotransferase family protein | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS06305 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.38 | QEN71_RS24660 | | PLP-dependent aminotransferase family protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_00587 | | hydroxymethylpyrimidine kinase /phosphomethylpyrimidine kinase | 0.37 | H281DRAFT_00271 | | 2-aminoadipate transaminase | — | — |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS12250 | | phosphomethylpyrimidine kinase | 0.37 | BPHYT_RS05965 | | 2-aminoadipate aminotransferase | — | — |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS25930 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.80 | ABIE40_RS11345 | | PLP-dependent aminotransferase family protein | low | > 107 |
| Paraburkholderia graminis OAS925 | 0.43 | ABIE53_002529 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.38 | ABIE53_001399 | | 2-aminoadipate transaminase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.42 | BACOVA_02530 | | phosphomethylpyrimidine kinase | 0.37 | BACOVA_03037 | | aminotransferase, class I/II | low | > 96 |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS14505 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.38 | ABCV34_RS13175 | | PLP-dependent aminotransferase family protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF249 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | 0.30 | GFF1752 | | Valine--pyruvate aminotransferase (EC 2.6.1.66) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_1063 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | 0.30 | Ac3H11_1358 | | L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) (from data) | — | — |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A1102 | | Phosphomethylpyrimidine kinase (NCBI) | 0.53 | Rru_A3004 | | Aminotransferase, class I and II (NCBI) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.36 | DVU0931 | thiD | phosphomethylpyrimidine kinase (TIGR) | 0.30 | DVU2364 | | aminotransferase, classes I and II (TIGR) | — | — |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS15330 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.30 | ABID97_RS17310 | | PLP-dependent aminotransferase family protein | — | — |
| Azospirillum brasilense Sp245 | 0.35 | AZOBR_RS07045 | | phosphomethylpyrimidine kinase | 0.50 | AZOBR_RS06555 | | Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) | — | — |
| Ralstonia solanacearum UW163 | 0.35 | UW163_RS03675 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.37 | UW163_RS15715 | | PLP-dependent aminotransferase family protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.35 | RALBFv3_RS09905 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.37 | RALBFv3_RS14095 | | PLP-dependent aminotransferase family protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS04830 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.37 | ABZR87_RS09815 | | PLP-dependent aminotransferase family protein | — | — |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS00495 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.37 | RS_RS04875 | | PLP-dependent aminotransferase family protein | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.34 | Xcc-8004.3091.1 | | hypothetical protein | 0.37 | Xcc-8004.2917.1 | | Valine--pyruvate aminotransferase (EC 2.6.1.66) | low | > 74 |
| Caulobacter crescentus NA1000 Δfur | 0.34 | CCNA_03331 | | phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase | 0.53 | CCNA_02244 | | aminotransferase class I family protein | — | — |
| Caulobacter crescentus NA1000 | 0.34 | CCNA_03331 | | phosphomethylpyrimidine kinase/hydroxymethylpyrimidine kinase | 0.53 | CCNA_02244 | | aminotransferase class I family protein | — | — |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS23455 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.37 | RPSI07_RS19365 | | PLP-dependent aminotransferase family protein | — | — |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_06182 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.49 | MPMX19_01777 | | 2-aminoadipate transaminase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.32 | DvMF_1376 | | phosphomethylpyrimidine kinase (RefSeq) | 0.33 | DvMF_3003 | | putative transcriptional regulator, GntR family (RefSeq) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.31 | RR42_RS01370 | | phosphomethylpyrimidine kinase | 0.34 | RR42_RS14595 | | 2-aminoadipate aminotransferase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.27 | DY961_RS12975 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.28 | DY961_RS19930 | | PLP-dependent aminotransferase family protein | low | > 100 |
| Pseudomonas aeruginosa PA14 | 0.27 | IKLFDK_20515 | | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 0.28 | IKLFDK_07940 | | GntR family transcriptional regulator | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.27 | DQ20_RS48300 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.28 | DQ20_RS54030 | | PLP-dependent aminotransferase family protein | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_15435 | | hydrogenase | 0.26 | AO356_19495 | | GntR family transcriptional regulator | low | > 104 |
| Pseudomonas sp. BP01 | 0.27 | JOY50_RS21745 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.27 | JOY50_RS02460 | | PLP-dependent aminotransferase family protein | low | > 84 |
| Pseudomonas simiae WCS417 | 0.27 | PS417_24600 | | hydrogenase | 0.29 | PS417_19385 | | GntR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.26 | AO353_06350 | | hydrogenase | 0.27 | AO353_02295 | | GntR family transcriptional regulator | low | > 101 |
| Pseudomonas sp. S08-1 | 0.26 | OH686_09185 | | Hydroxymethylpyrimidine phosphate kinase ThiD | 0.29 | OH686_00615 | | Aspartate aminotransferase (AspB-4) | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.26 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.29 | PFLU_RS21355 | | PLP-dependent aminotransferase family protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.26 | PFLU_RS26530 | | hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.29 | PFLU_RS21355 | | PLP-dependent aminotransferase family protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.26 | PfGW456L13_1385 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | 0.26 | PfGW456L13_4175 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.26 | GFF3905 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.18 | GFF395 | | HTH-type transcriptional regulator NorG | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.26 | Psest_0537 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.28 | Psest_1990 | | Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | 0.29 | Psyr_1841 | | Aminotransferase, class I and II | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_4340 | | phosphomethylpyrimidine kinase, putative | 0.29 | Psyr_1841 | | Aminotransferase, class I and II | low | > 86 |
| Pseudomonas segetis P6 | 0.25 | MPMX49_01077 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.30 | MPMX49_02292 | | 2-aminoadipate transaminase | low | > 75 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_03843 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.26 | PFR28_03135 | | 2-aminoadipate transaminase | low | > 88 |
| Herbaspirillum seropedicae SmR1 | 0.24 | HSERO_RS02135 | | phosphomethylpyrimidine kinase | 0.37 | HSERO_RS09050 | | 2-aminoadipate aminotransferase | low | > 78 |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_2718 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | 0.27 | Pf1N1B4_3771 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_5024 | | Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) | 0.26 | Pf6N2E2_5813 | | Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) | low | > 103 |
| Pseudomonas lactucae CFBP13502 | 0.23 | GEMAOFIL_05068 | | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | 0.28 | GEMAOFIL_04080 | | 2-aminoadipate transaminase | low | > 96 |
Not shown: 52 genomes with orthologs for Atu3290 only; 3 genomes with orthologs for Atu2015 only