Conservation of cofitness between Atu0298 and Atu1075 in Agrobacterium fabrum C58

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0298 orotidine 5 1.0 Atu1075 amidophosphoribosyltransferase 0.92 7
Rhizobium sp. OAE497 0.79 ABIE40_RS01345 orotidine-5'-phosphate decarboxylase 0.87 ABIE40_RS06270 amidophosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.75 SMc00412 orotidine 5'-phosphate decarboxylase 0.84 SMc00554 amidophosphoribosyltransferase 0.92 4
Bosea sp. OAE506 0.53 ABIE41_RS00050 orotidine-5'-phosphate decarboxylase 0.65 ABIE41_RS17810 amidophosphoribosyltransferase 0.54 15
Rhodopseudomonas palustris CGA009 0.51 TX73_001750 orotidine-5'-phosphate decarboxylase 0.61 TX73_015990 amidophosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.62 CCNA_01730 amidophosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.44 CCNA_00104 orotidine 5'-phosphate decarboxylase 0.62 CCNA_01730 amidophosphoribosyltransferase 0.83 54
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS14665 orotidine-5'-phosphate decarboxylase 0.56 A4249_RS03735 amidophosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c32450 orotidine 5'-phosphate decarboxylase PyrF 0.51 PGA1_c10810 amidophosphoribosyltransferase PurF 0.85 14
Alteromonas macleodii MIT1002 0.36 MIT1002_02184 Orotidine 5'-phosphate decarboxylase 0.29 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_2331 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.27 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_09560 orotidine-5'-phosphate decarboxylase 0.29 CSW01_05115 amidophosphoribosyltransferase low > 62
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2569 pyrF orotidine 5'-phosphate decarboxylase 0.36 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0234 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.55 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Marinobacter adhaerens HP15 0.32 HP15_1370 orotidine 5'-phosphate decarboxylase 0.27 HP15_1821 amidophosphoribosyltransferase — —
Shewanella sp. ANA-3 0.32 Shewana3_1981 orotidine 5'-phosphate decarboxylase (RefSeq) 0.30 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.81 59
Shewanella oneidensis MR-1 0.31 SO2398 pyrF orotidine 5`-phosphate decarboxylase (NCBI ptt file) 0.30 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.85 23
Dinoroseobacter shibae DFL-12 0.31 Dshi_0615 orotidine 5'-phosphate decarboxylase (RefSeq) 0.50 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.87 6
Shewanella amazonensis SB2B 0.31 Sama_1740 orotidine 5'-phosphate decarboxylase (RefSeq) 0.30 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.56 15
Dickeya dadantii 3937 0.31 DDA3937_RS12525 orotidine-5'-phosphate decarboxylase 0.30 DDA3937_RS14435 amidophosphoribosyltransferase 0.85 9
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01670 orotidine 5'-phosphate decarboxylase 0.27 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2056 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.26 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.27 PFLU_RS20515 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.30 PFLU_RS09110 orotidine-5'-phosphate decarboxylase 0.27 PFLU_RS20515 amidophosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.30 HGI48_RS12580 orotidine-5'-phosphate decarboxylase 0.29 HGI48_RS14405 amidophosphoribosyltransferase 0.73 13
Pantoea sp. MT58 0.30 IAI47_09275 orotidine-5'-phosphate decarboxylase 0.29 IAI47_06275 amidophosphoribosyltransferase 0.96 9
Shewanella loihica PV-4 0.30 Shew_1958 orotidine 5'-phosphate decarboxylase (RefSeq) 0.31 Shew_2302 amidophosphoribosyltransferase (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_02401 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.30 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli ECRC62 0.30 BNILDI_18365 pyrF orotidine-5'-phosphate decarboxylase 0.29 BNILDI_13255 purF amidophosphoribosyltransferase — —
Erwinia tracheiphila SCR3 0.30 LU632_RS12500 pyrF orotidine-5'-phosphate decarboxylase 0.29 LU632_RS07865 purF amidophosphoribosyltransferase 0.91 8
Dickeya dianthicola ME23 0.30 DZA65_RS13030 orotidine-5'-phosphate decarboxylase 0.29 DZA65_RS15335 amidophosphoribosyltransferase 0.65 66
Escherichia coli ECOR27 0.30 NOLOHH_20215 pyrF orotidine-5'-phosphate decarboxylase 0.29 NOLOHH_14335 purF amidophosphoribosyltransferase low > 57
Escherichia coli BL21 0.30 ECD_01258 orotidine-5'-phosphate decarboxylase 0.29 ECD_02237 amidophosphoribosyltransferase 0.63 13
Pectobacterium carotovorum WPP14 0.30 HER17_RS09390 orotidine-5'-phosphate decarboxylase 0.29 HER17_RS07020 amidophosphoribosyltransferase 0.96 13
Escherichia coli BW25113 0.30 b1281 pyrF orotidine 5'-phosphate decarboxylase (NCBI) 0.29 b2312 purF amidophosphoribosyltransferase (NCBI) 0.89 9
Acinetobacter radioresistens SK82 0.30 MPMX26_01242 Orotidine 5'-phosphate decarboxylase 0.26 MPMX26_01122 Amidophosphoribosyltransferase 0.79 31
Pseudomonas putida KT2440 0.30 PP_1815 Orotidine 5'-phosphate decarboxylase 0.27 PP_2000 amidophosphoribosyl transferase — —
Pseudomonas sp. RS175 0.29 PFR28_03064 'Orotidine 5'-phosphate decarboxylase' transl_table=11 0.26 PFR28_02811 Amidophosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.27 Psyr_1668 amidophosphoribosyltransferase — —
Klebsiella michiganensis M5al 0.29 BWI76_RS11965 orotidine-5'-phosphate decarboxylase 0.30 BWI76_RS20350 amidophosphoribosyltransferase 0.73 9
Escherichia fergusonii Becca 0.29 EFB2_02644 Orotidine 5'-phosphate decarboxylase 0.30 EFB2_01546 Amidophosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_1836 orotidine-5'-phosphate decarboxylase 0.27 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.29 PS417_09055 orotidine 5'-phosphate decarboxylase 0.27 PS417_18535 amidophosphoribosyltransferase — —
Fusobacterium nucleatum SB010 0.29 HUW76_08730 orotidine-5'-phosphate decarboxylase 0.32 HUW76_05170 amidophosphoribosyltransferase low > 35
Enterobacter asburiae PDN3 0.29 EX28DRAFT_0954 orotidine-5'-phosphate decarboxylase (EC 4.1.1.23) 0.29 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Rhodospirillum rubrum S1H 0.29 Rru_A3424 Orotidine-5'-phosphate decarboxylase (NCBI) 0.56 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Azospirillum brasilense Sp245 0.29 AZOBR_RS03135 orotidine 5'-phosphate decarboxylase 0.57 AZOBR_RS08310 amidophosphoribosyltransferase 0.35 39
Escherichia coli ECRC101 0.29 OKFHMN_02550 pyrF orotidine-5'-phosphate decarboxylase 0.30 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.29 MCAODC_15715 pyrF orotidine-5'-phosphate decarboxylase 0.30 MCAODC_13755 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC99 0.29 KEDOAH_26215 pyrF orotidine-5'-phosphate decarboxylase 0.30 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 0.29 HEPCGN_25650 pyrF orotidine-5'-phosphate decarboxylase 0.30 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia coli ECRC98 0.29 JDDGAC_05095 pyrF orotidine-5'-phosphate decarboxylase 0.30 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.29 NIAGMN_26720 pyrF orotidine-5'-phosphate decarboxylase 0.30 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Rahnella sp. WP5 0.29 EX31_RS09855 orotidine-5'-phosphate decarboxylase 0.28 EX31_RS19570 amidophosphoribosyltransferase 0.88 63
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5887 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.26 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19850 orotidine 5'-phosphate decarboxylase 0.26 AO356_21465 amidophosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5259.1 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.27 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Enterobacter sp. TBS_079 0.28 MPMX20_02494 Orotidine 5'-phosphate decarboxylase 0.30 MPMX20_03247 Amidophosphoribosyltransferase 0.83 25
Pseudomonas sp. S08-1 0.28 OH686_00580 Orotidine 5'-phosphate decarboxylase 0.27 OH686_04420 amidophosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.28 Psest_1714 orotidine 5'-phosphate decarboxylase, subfamily 1 0.27 Psest_2579 amidophosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.28 ECOLIN_RS07730 orotidine-5'-phosphate decarboxylase 0.30 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Serratia liquefaciens MT49 0.28 IAI46_13915 orotidine-5'-phosphate decarboxylase 0.29 IAI46_17810 amidophosphoribosyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF2704 'Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)' transl_table=11 0.30 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Desulfovibrio vulgaris Miyazaki F 0.26 DvMF_1137 orotidine 5'-phosphate decarboxylase (RefSeq) 0.41 DvMF_2307 amidophosphoribosyltransferase (RefSeq) 0.85 7
Magnetospirillum magneticum AMB-1 0.26 AMB_RS20255 orotidine-5'-phosphate decarboxylase 0.55 AMB_RS10545 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.26 MPMX19_02208 Orotidine 5'-phosphate decarboxylase 0.57 MPMX19_00906 Amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU0901 pyrF orotidine 5`-phosphate decarboxylase (TIGR) 0.41 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —

Not shown: 1 genomes with orthologs for Atu0298 only; 29 genomes with orthologs for Atu1075 only