| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 1.0 | ABZR87_RS10180 | | DegQ family serine endoprotease | 0.61 | 15 |
| Ralstonia solanacearum PSI07 | 0.76 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.88 | RPSI07_RS19000 | | PDZ domain-containing protein | low | > 81 |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.88 | UW163_RS11925 | | peptidase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.88 | RALBFv3_RS14460 | | peptidase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.88 | RS_RS05240 | | PDZ domain-containing protein | 0.39 | 78 |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS02415 | | hemolysin D | 0.58 | HSERO_RS09640 | | peptidase | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS20645 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 0.67 | RR42_RS14065 | | serine peptidase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3839 | | RND efflux system, membrane fusion protein CmeA | 0.52 | GFF3342 | | HtrA protease/chaperone protein | — | — |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.51 | ABID97_RS08345 | | DegQ family serine endoprotease | 0.34 | 51 |
| Variovorax sp. SCN45 | 0.47 | GFF3726 | | RND efflux system, membrane fusion protein | 0.55 | GFF3866 | | HtrA protease/chaperone protein | low | > 127 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.57 | QEN71_RS04590 | | DegQ family serine endoprotease | low | > 153 |
| Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.51 | Ac3H11_1570 | | HtrA protease/chaperone protein | — | — |
| Pantoea sp. MT58 | 0.43 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.26 | IAI47_17260 | | serine endoprotease DegQ | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.26 | LU632_RS21355 | | Do family serine endopeptidase | — | — |
| Rahnella sp. WP5 | 0.43 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.24 | EX31_RS03170 | | serine endoprotease DegP | low | > 89 |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.29 | MPMX19_00793 | | hypothetical protein | low | > 112 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.38 | Xcc-8004.3679.1 | | Serine protease precursor MucD/AlgY associated with sigma factor RpoE | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS16175 | | hemolysin D | 0.57 | BPHYT_RS14390 | | peptidase | low | > 109 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.42 | DVU2817 | acrA | multidrug resistance protein (TIGR) | 0.31 | DVU1468 | htrA | peptidase/PDZ domain protein (TIGR) | low | > 55 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_04171 | | membrane fusion protein, multidrug efflux system | 0.57 | H281DRAFT_04358 | | serine protease Do | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.41 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | 0.57 | ABIE53_003040 | | serine protease Do | low | > 113 |
| Dyella japonica UNC79MFTsu3.2 | 0.40 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.37 | ABZR86_RS07170 | | DegQ family serine endoprotease | low | > 74 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS30180 | | hemolysin D | 0.30 | AZOBR_RS17805 | | serine protease | low | > 97 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_26840 | | RND transporter | 0.38 | AO353_17640 | | serine peptidase | low | > 101 |
| Rhodopseudomonas palustris CGA009 | 0.39 | TX73_014170 | | efflux RND transporter periplasmic adaptor subunit | 0.31 | TX73_009940 | | Do family serine endopeptidase | low | > 86 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.34 | LRK54_RS16950 | | Do family serine endopeptidase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.34 | LRK55_RS16665 | | Do family serine endopeptidase | low | > 63 |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A2050 | | Secretion protein HlyD (NCBI) | 0.28 | Rru_A2201 | | Peptidase S1C, Do (NCBI) | low | > 58 |
| Sinorhizobium meliloti 1021 | 0.37 | SMc02868 | | multidrug efflux system protein | 0.28 | SMc02365 | | protease precursor protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | 0.28 | ABIE40_RS20720 | | DegQ family serine endoprotease | low | > 107 |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_0560 | | RND family efflux transporter, MFP subunit | 0.27 | Ga0059261_1382 | | periplasmic serine protease, Do/DeqQ family | low | > 68 |
| Dechlorosoma suillum PS | 0.34 | Dsui_3181 | | RND family efflux transporter, MFP subunit | 0.47 | Dsui_2455 | | periplasmic serine protease, Do/DeqQ family | low | > 51 |
| Agrobacterium fabrum C58 | 0.34 | Atu3203 | | RND multidrug efflux membrane permease | 0.29 | Atu0977 | | serine protease DO-like protease | 0.25 | 22 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | 0.44 | ABCV34_RS08340 | | DegQ family serine endoprotease | — | — |
| Lysobacter sp. OAE881 | 0.33 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.37 | ABIE51_RS13880 | | DegQ family serine endoprotease | low | > 62 |
| Desulfovibrio vulgaris Miyazaki F | 0.30 | DvMF_2164 | | efflux transporter, RND family, MFP subunit (RefSeq) | 0.31 | DvMF_0308 | | protease Do (RefSeq) | low | > 51 |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS04580 | | efflux RND transporter periplasmic adaptor subunit | 0.24 | HMPREF1181_RS10785 | | trypsin-like peptidase domain-containing protein | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.23 | HMPREF1078_RS00005 | | efflux RND transporter periplasmic adaptor subunit | 0.27 | HMPREF1078_RS16415 | | Do family serine endopeptidase | low | > 61 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.21 | CA265_RS23015 | | efflux transporter periplasmic adaptor subunit | 0.23 | CA265_RS23030 | | serine protease | low | > 88 |
| Phocaeicola dorei CL03T12C01 | 0.21 | ABI39_RS18720 | | efflux RND transporter periplasmic adaptor subunit | 0.24 | ABI39_RS13980 | | Do family serine endopeptidase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.21 | HMPREF1058_RS05165 | | efflux RND transporter periplasmic adaptor subunit | 0.23 | HMPREF1058_RS17765 | | Do family serine endopeptidase | low | > 67 |
Not shown: 48 genomes with orthologs for ABZR87_RS05310 only; 7 genomes with orthologs for ABZR87_RS10180 only