| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS04785 | | phosphomethylpyrimidine synthase ThiC | 1.0 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.64 | 11 |
| Ralstonia solanacearum PSI07 | 0.97 | RPSI07_RS23420 | | phosphomethylpyrimidine synthase ThiC | 0.94 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | low | > 81 |
| Ralstonia solanacearum UW163 | 0.97 | UW163_RS03640 | | phosphomethylpyrimidine synthase ThiC | 0.94 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.97 | RALBFv3_RS09940 | | phosphomethylpyrimidine synthase ThiC | 0.94 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.96 | RS_RS00555 | | phosphomethylpyrimidine synthase | 0.91 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.90 | RR42_RS01290 | | thiamine biosynthesis protein ThiC | 0.81 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Pseudomonas putida KT2440 | 0.73 | PP_4922 | | Phosphomethylpyrimidine synthase | 0.57 | PP_5149 | | threonine deaminase | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.73 | Psest_0477 | | thiamine biosynthesis protein ThiC | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | low | > 67 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_15885 | | phosphomethylpyrimidine synthase | 0.58 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_08810 | | thiamine biosynthesis protein ThiC | 0.56 | AO356_10330 | | threonine dehydratase | low | > 104 |
| Pseudomonas sp. RS175 | 0.72 | PFR28_05091 | | Phosphomethylpyrimidine synthase | 0.56 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_3644 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.56 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_187 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.56 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Rhodanobacter sp. FW510-T8 | 0.72 | OKGIIK_16965 | thiC | phosphomethylpyrimidine synthase ThiC | 0.59 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 52 |
| Pseudomonas fluorescens SBW25 | 0.72 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.57 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.72 | PFLU_RS02430 | | phosphomethylpyrimidine synthase ThiC | 0.57 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_0544 | | hydroxymethylpyrimidine synthase | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Marinobacter adhaerens HP15 | 0.72 | HP15_453 | | thiamine biosynthesis protein thiC | 0.56 | HP15_3213 | | threonine dehydratase biosynthetic | 0.65 | 49 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_1447 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.56 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_02355 | | thiamine biosynthesis protein ThiC | 0.57 | PS417_27010 | | threonine dehydratase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_13010 | | thiamine biosynthesis protein ThiC | 0.57 | AO353_08485 | | threonine dehydratase | low | > 101 |
| Dyella japonica UNC79MFTsu3.2 | 0.72 | ABZR86_RS17230 | | phosphomethylpyrimidine synthase ThiC | 0.66 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | 0.46 | 6 |
| Herbaspirillum seropedicae SmR1 | 0.71 | HSERO_RS02120 | | phosphomethylpyrimidine synthase ThiC | 0.70 | HSERO_RS19510 | | threonine dehydratase | low | > 78 |
| Dechlorosoma suillum PS | 0.71 | Dsui_0422 | | thiamine biosynthesis protein ThiC | 0.68 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS05480 | | phosphomethylpyrimidine synthase ThiC | 0.72 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.85 | 10 |
| Acinetobacter radioresistens SK82 | 0.70 | MPMX26_00180 | | Phosphomethylpyrimidine synthase | 0.45 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | low | > 36 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS20380 | | phosphomethylpyrimidine synthase ThiC | 0.47 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS10825 | | phosphomethylpyrimidine synthase ThiC | 0.71 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Paraburkholderia graminis OAS925 | 0.70 | ABIE53_002857 | | phosphomethylpyrimidine synthase | 0.71 | ABIE53_000761 | | threonine dehydratase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.70 | BPHYT_RS13220 | | phosphomethylpyrimidine synthase | 0.71 | BPHYT_RS11065 | | threonine dehydratase | — | — |
| Serratia liquefaciens MT49 | 0.69 | IAI46_01320 | | phosphomethylpyrimidine synthase ThiC | 0.49 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Rahnella sp. WP5 | 0.69 | EX31_RS16815 | | phosphomethylpyrimidine synthase ThiC | 0.47 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | low | > 89 |
| Dickeya dadantii 3937 | 0.68 | DDA3937_RS01175 | | phosphomethylpyrimidine synthase ThiC | 0.50 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.70 | 55 |
| Alteromonas macleodii MIT1002 | 0.68 | MIT1002_00097 | | Phosphomethylpyrimidine synthase | 0.50 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | low | > 70 |
| Escherichia coli ECOR27 | 0.68 | NOLOHH_05520 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli ECRC62 | 0.68 | BNILDI_06005 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 75 |
| Escherichia coli BW25113 | 0.68 | b3994 | thiC | thiamine biosynthesis protein ThiC (NCBI) | 0.47 | b3772 | ilvA | threonine dehydratase (NCBI) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.68 | HGI48_RS01170 | | phosphomethylpyrimidine synthase ThiC | 0.50 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.74 | 64 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.68 | OHPLBJKB_04056 | | Phosphomethylpyrimidine synthase | 0.47 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 73 |
| Escherichia coli Nissle 1917 | 0.68 | ECOLIN_RS23040 | | phosphomethylpyrimidine synthase ThiC | 0.47 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Dickeya dianthicola ME23 | 0.68 | DZA65_RS01215 | | phosphomethylpyrimidine synthase ThiC | 0.47 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.82 | 13 |
| Escherichia coli ECRC101 | 0.68 | MCAODC_03875 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 87 |
| Escherichia coli ECRC100 | 0.68 | OKFHMN_13375 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 80 |
| Escherichia coli ECRC99 | 0.68 | KEDOAH_14785 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC102 | 0.68 | NIAGMN_11125 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia fergusonii Becca | 0.68 | EFB2_04617 | | Phosphomethylpyrimidine synthase | 0.47 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Escherichia coli ECRC98 | 0.68 | JDDGAC_17000 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 86 |
| Enterobacter asburiae PDN3 | 0.68 | EX28DRAFT_4536 | | phosphomethylpyrimidine synthase | 0.47 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | low | > 76 |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_00217 | | Phosphomethylpyrimidine synthase | 0.47 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | low | > 85 |
| Pantoea sp. MT58 | 0.68 | IAI47_18085 | | phosphomethylpyrimidine synthase ThiC | 0.48 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | low | > 76 |
| Escherichia coli BL21 | 0.68 | ECD_03871 | | phosphomethylpyrimidine synthase | 0.47 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | low | > 61 |
| Klebsiella michiganensis M5al | 0.68 | BWI76_RS01555 | | phosphomethylpyrimidine synthase ThiC | 0.47 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.37 | 47 |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_12010 | thiC | phosphomethylpyrimidine synthase ThiC | 0.47 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.67 | 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF4198 | | Thiamin biosynthesis protein ThiC | 0.47 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Shewanella amazonensis SB2B | 0.67 | Sama_1860 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.50 | Sama_3278 | | threonine dehydratase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.67 | Shew_2096 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.48 | Shew_0293 | | threonine dehydratase (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.67 | LU632_RS00970 | thiC | phosphomethylpyrimidine synthase ThiC | 0.48 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Shewanella oneidensis MR-1 | 0.66 | SO2445 | thiC | thiamin biosynthesis protein ThiC (NCBI ptt file) | 0.48 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_1936 | | thiamine biosynthesis protein ThiC (RefSeq) | 0.48 | Shewana3_0359 | | threonine dehydratase (RefSeq) | low | > 73 |
| Variovorax sp. SCN45 | 0.65 | GFF2000 | | Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) | 0.67 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_00335 | | phosphomethylpyrimidine synthase | 0.48 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS25235 | | phosphomethylpyrimidine synthase ThiC | 0.65 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_2027 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.68 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.66 | 56 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF4626 | | Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) | 0.67 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 90 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.59 | A4249_RS15715 | | phosphomethylpyrimidine synthase ThiC | 0.51 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | low | > 48 |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_00336 | | Phosphomethylpyrimidine synthase | 0.57 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | low | > 112 |
Not shown: 27 genomes with orthologs for ABZR87_RS04785 only; 2 genomes with orthologs for ABZR87_RS07360 only