Conservation of cofitness between ABZR87_RS13275 and ABZR87_RS05595 in Ralstonia sp. UNC404CL21Col

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS13275 30S ribosomal protein S12 methylthiotransferase RimO 1.0 ABZR87_RS05595 exodeoxyribonuclease III 0.37 2
Ralstonia solanacearum GMI1000 0.99 RS_RS08245 30S ribosomal protein S12 methylthiotransferase RimO 0.95 RS_RS00690 exodeoxyribonuclease III low > 80
Ralstonia solanacearum PSI07 0.97 RPSI07_RS16010 30S ribosomal protein S12 methylthiotransferase RimO 0.95 RPSI07_RS23290 exodeoxyribonuclease III low > 81
Ralstonia solanacearum UW163 0.97 UW163_RS14790 30S ribosomal protein S12 methylthiotransferase RimO 0.95 UW163_RS03500 exodeoxyribonuclease III — —
Ralstonia solanacearum IBSBF1503 0.97 RALBFv3_RS01480 30S ribosomal protein S12 methylthiotransferase RimO 0.95 RALBFv3_RS10080 exodeoxyribonuclease III low > 76
Cupriavidus basilensis FW507-4G11 0.91 RR42_RS07640 ribosomal protein S12 methylthiotransferase 0.75 RR42_RS01220 exodeoxyribonuclease III low > 128
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS22185 30S ribosomal protein S12 methylthiotransferase RimO 0.84 QEN71_RS00270 exodeoxyribonuclease III low > 153
Burkholderia phytofirmans PsJN 0.88 BPHYT_RS09170 ribosomal protein S12 methylthiotransferase RimO 0.83 BPHYT_RS01570 exodeoxyribonuclease III — —
Paraburkholderia graminis OAS925 0.87 ABIE53_002068 ribosomal protein S12 methylthiotransferase 0.83 ABIE53_000410 exodeoxyribonuclease-3 low > 113
Paraburkholderia bryophila 376MFSha3.1 0.87 H281DRAFT_00855 SSU ribosomal protein S12P methylthiotransferase 0.83 H281DRAFT_02218 exodeoxyribonuclease-3 low > 103
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS15005 ribosomal protein S12 methylthiotransferase 0.65 HSERO_RS23385 exodeoxyribonuclease III low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF4923 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.57 GFF1881 Exodeoxyribonuclease III (EC 3.1.11.2) low > 90
Variovorax sp. SCN45 0.73 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.56 GFF5066 Exodeoxyribonuclease III (EC 3.1.11.2) low > 127
Acidovorax sp. GW101-3H11 0.73 Ac3H11_364 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.57 Ac3H11_3342 Exodeoxyribonuclease III (EC 3.1.11.2) low > 79
Variovorax sp. OAS795 0.73 ABID97_RS17220 30S ribosomal protein S12 methylthiotransferase RimO 0.57 ABID97_RS03905 exodeoxyribonuclease III low > 91
Dechlorosoma suillum PS 0.69 Dsui_2540 ribosomal protein S12 methylthiotransferase RimO 0.62 Dsui_0872 exodeoxyribonuclease III low > 51
Marinobacter adhaerens HP15 0.67 HP15_2459 MiaB-like tRNA modifying enzyme YliG 0.35 HP15_299 exodeoxyribonuclease III Xth — —
Pseudomonas stutzeri RCH2 0.65 Psest_2632 ribosomal protein S12 methylthiotransferase RimO 0.36 Psest_3811 exodeoxyribonuclease III (xth) — —
Castellaniella sp019104865 MT123 0.65 ABCV34_RS14230 30S ribosomal protein S12 methylthiotransferase RimO 0.58 ABCV34_RS10900 exodeoxyribonuclease III low > 48
Pseudomonas sp. S08-1 0.65 OH686_18875 ribosomal protein S12 methylthiotransferase RimO 0.36 OH686_13585 Exodeoxyribonuclease III low > 80
Acinetobacter radioresistens SK82 0.65 MPMX26_01294 Ribosomal protein S12 methylthiotransferase RimO 0.45 MPMX26_02938 Exodeoxyribonuclease low > 36
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS08100 30S ribosomal protein S12 methylthiotransferase RimO 0.54 ABZR86_RS15650 exodeoxyribonuclease III low > 74
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_16875 ribosomal protein S12 methylthiotransferase RimO 0.36 AO353_09250 exodeoxyribonuclease III low > 101
Pseudomonas sp. RS175 0.64 PFR28_00486 Ribosomal protein S12 methylthiotransferase RimO 0.36 PFR28_04418 Exodeoxyribonuclease low > 88
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS01780 30S ribosomal protein S12 methylthiotransferase RimO 0.53 LRK54_RS09195 exodeoxyribonuclease III low > 59
Pseudomonas fluorescens SBW25 0.64 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.36 PFLU_RS29480 exodeoxyribonuclease III low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.36 Psyr_0215 Exodeoxyribonuclease III xth low > 86
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS05950 30S ribosomal protein S12 methylthiotransferase RimO 0.36 PFLU_RS29480 exodeoxyribonuclease III low > 109
Pseudomonas putida KT2440 0.64 PP_1197 ribosomal protein S12 methylthiotransferase 0.37 PP_5292 Catabolite repression control protein — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1392 SSU ribosomal protein S12P methylthiotransferase 0.36 Psyr_0215 Exodeoxyribonuclease III xth low > 86
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3160 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 Pf1N1B4_2119 Exodeoxyribonuclease III (EC 3.1.11.2) — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS01560 30S ribosomal protein S12 methylthiotransferase RimO 0.53 LRK55_RS08725 exodeoxyribonuclease III low > 63
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4653 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 PfGW456L13_787 Exodeoxyribonuclease III (EC 3.1.11.2) low > 87
Pseudomonas simiae WCS417 0.64 PS417_05880 ribosomal protein S12 methylthiotransferase 0.36 PS417_27800 exodeoxyribonuclease III low > 88
Lysobacter sp. OAE881 0.63 ABIE51_RS08160 30S ribosomal protein S12 methylthiotransferase RimO 0.52 ABIE51_RS00055 exodeoxyribonuclease III low > 62
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2978 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 0.36 Pf6N2E2_4369 Exodeoxyribonuclease III (EC 3.1.11.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_05600 ribosomal protein S12 methylthiotransferase RimO 0.36 AO356_12515 exodeoxyribonuclease III low > 104
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_04755 rimO 30S ribosomal protein S12 methylthiotransferase RimO 0.55 OKGIIK_15690 xth exodeoxyribonuclease III low > 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_0564 ribosomal protein S12 methylthiotransferase RimO 0.38 Echvi_1056 exodeoxyribonuclease III low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS16365 30S ribosomal protein S12 methylthiotransferase RimO 0.39 CA265_RS21445 exodeoxyribonuclease III low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS15425 30S ribosomal protein S12 methylthiotransferase RimO 0.42 ABZR88_RS20005 exodeoxyribonuclease III low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_15685 30S ribosomal protein S12 methylthiotransferase RimO 0.43 CA264_17265 exodeoxyribonuclease III low > 74
Bacteroides thetaiotaomicron VPI-5482 0.28 BT0913 putative Fe-S oxidoreductase (NCBI ptt file) 0.40 BT0630 exodeoxyribonuclease (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.28 BACOVA_00737 ribosomal protein S12 methylthiotransferase RimO 0.40 BACOVA_02252 exodeoxyribonuclease III low > 94
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS04095 30S ribosomal protein S12 methylthiotransferase RimO 0.33 HMPREF1058_RS17100 exodeoxyribonuclease III low > 67
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS17125 30S ribosomal protein S12 methylthiotransferase RimO 0.33 ABI39_RS13020 exodeoxyribonuclease III low > 72
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS16335 30S ribosomal protein S12 methylthiotransferase RimO 0.40 HMPREF1181_RS16605 exodeoxyribonuclease III low > 56
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS01815 30S ribosomal protein S12 methylthiotransferase RimO 0.39 HMPREF1078_RS00480 exodeoxyribonuclease III low > 61
Desulfovibrio vulgaris Miyazaki F 0.25 DvMF_1701 MiaB-like tRNA modifying enzyme YliG (RefSeq) 0.30 DvMF_2456 exodeoxyribonuclease III (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU3151 MiaB-like tRNA modifying enzyme YliG, TIGR01125 (TIGR) 0.33 DVU3259 xth exodeoxyribonuclease III (TIGR) low > 55

Not shown: 38 genomes with orthologs for ABZR87_RS13275 only; 5 genomes with orthologs for ABZR87_RS05595 only