Conservation of cofitness between A4249_RS06780 and A4249_RS07780 in Brevundimonas sp. GW460-12-10-14-LB2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS06780 YicC family protein 1.0 A4249_RS07780 efflux RND transporter permease subunit 0.51 5
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01752 YicC-family protein 0.60 CCNA_01262 cation/multidrug efflux pump, AcrB family low > 67
Caulobacter crescentus NA1000 0.56 CCNA_01752 YicC-family protein 0.60 CCNA_01262 cation/multidrug efflux pump, AcrB family low > 66
Azospirillum sp. SherDot2 0.43 MPMX19_00983 hypothetical protein 0.34 MPMX19_04343 Efflux pump membrane transporter BepE — —
Azospirillum brasilense Sp245 0.41 AZOBR_RS16330 hypothetical protein 0.33 AZOBR_RS22130 acriflavin resistance protein — —
Rhodospirillum rubrum S1H 0.40 Rru_A0428 hypothetical protein (NCBI) 0.39 Rru_A2094 Acriflavin resistance protein (NCBI) — —
Magnetospirillum magneticum AMB-1 0.38 AMB_RS03835 YicC family protein 0.25 AMB_RS17260 acriflavine resistance protein B low > 64
Sinorhizobium meliloti 1021 0.35 SMc00576 hypothetical protein 0.32 SMc01457 transport transmembrane protein low > 103
Rhizobium sp. OAE497 0.35 ABIE40_RS06380 YicC/YloC family endoribonuclease 0.34 ABIE40_RS11655 efflux RND transporter permease subunit low > 107
Agrobacterium fabrum C58 0.34 Atu1100 hypothetical protein 0.33 Atu2054 AcrB/AcrD/AcrF family protein low > 89
Rhodopseudomonas palustris CGA009 0.34 TX73_015880 YicC family protein 0.26 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit low > 86
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_01110 YicC family protein 0.33 CSW01_04695 AcrB/AcrD/AcrF family protein low > 62
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS11750 YicC family protein 0.25 LRK54_RS11905 efflux RND transporter permease subunit low > 59
Rhodanobacter denitrificans MT42 0.27 LRK55_RS11475 YicC family protein 0.25 LRK55_RS11630 efflux RND transporter permease subunit low > 63
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_12145 yicC YicC-like family, N-terminal region 0.25 OKGIIK_11990 acrB acriflavine resistance protein B — —
Marinobacter adhaerens HP15 0.26 HP15_301 conserved hypothetical protein 0.41 HP15_3693 multidrug resistance protein low > 73
Dyella japonica UNC79MFTsu3.2 0.26 ABZR86_RS11895 YicC/YloC family endoribonuclease 0.24 ABZR86_RS11745 efflux RND transporter permease subunit low > 74
Shewanella amazonensis SB2B 0.26 Sama_0319 hypothetical protein (RefSeq) 0.43 Sama_1905 AcrB/AcrD/AcrF family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_3778 hypothetical protein (RefSeq) 0.43 Shewana3_1659 acriflavin resistance protein (RefSeq) low > 73
Dechlorosoma suillum PS 0.25 Dsui_0497 TIGR00255 family protein 0.33 Dsui_1555 cation/multidrug efflux pump low > 51
Shewanella oneidensis MR-1 0.25 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) 0.44 SO1882 AcrB/AcrD/AcrF family protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_4364 Protein YicC 0.26 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein low > 103
Alteromonas macleodii MIT1002 0.25 MIT1002_04072 hypothetical protein 0.43 MIT1002_00729 putative efflux pump membrane transporter TtgB low > 70
Pseudomonas sp. S08-1 0.25 OH686_13565 UPF0701 protein YicC 0.33 OH686_22670 RND efflux system, inner membrane transporter low > 80
Pseudomonas simiae WCS417 0.24 PS417_27815 hypothetical protein 0.26 PS417_22755 acriflavine resistance protein B low > 88
Pseudomonas sp. RS175 0.24 PFR28_04421 hypothetical protein 0.26 PFR28_03330 Multidrug efflux pump subunit AcrB — —
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_09265 hypothetical protein 0.26 AO353_04000 acriflavine resistance protein B low > 101
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_783 Protein YicC 0.25 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_2116 Protein YicC 0.26 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein — —
Pseudomonas stutzeri RCH2 0.24 Psest_3814 TIGR00255 family protein 0.26 Psest_1153 Cation/multidrug efflux pump — —
Shewanella loihica PV-4 0.24 Shew_3489 hypothetical protein (RefSeq) 0.43 Shew_1852 acriflavin resistance protein (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12495 hypothetical protein 0.26 AO356_18440 acriflavine resistance protein B low > 104
Pseudomonas putida KT2440 0.23 PP_5295 conserved protein of unknown function 0.27 PP_0906 putative Multidrug efflux RND transporter low > 96
Pseudomonas fluorescens SBW25 0.23 PFLU_RS29495 YicC family protein 0.26 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS29495 YicC family protein 0.26 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Lysobacter sp. OAE881 0.23 ABIE51_RS17280 YicC/YloC family endoribonuclease 0.43 ABIE51_RS16985 efflux RND transporter permease subunit low > 62
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1220.1 Protein YicC 0.42 Xcc-8004.1262.1 RND multidrug efflux transporter; Acriflavin resistance protein low > 74
Variovorax sp. SCN45 0.22 GFF2378 UPF0701 protein YicC 0.25 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_14585 YicC family protein 0.32 CA264_13040 acriflavin resistance protein low > 74
Acidovorax sp. GW101-3H11 0.21 Ac3H11_3667 Protein YicC 0.34 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3251 Protein YicC 0.35 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1140 hypothetical protein (RefSeq) 0.24 DvMF_1515 acriflavin resistance protein (RefSeq) low > 51
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS00515 YicC family protein 0.31 HMPREF1058_RS13825 efflux RND transporter permease subunit low > 67
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS08135 YicC family protein 0.31 ABI39_RS09435 efflux RND transporter permease subunit low > 72
Fusobacterium nucleatum SB010 0.18 HUW76_10345 YicC family protein 0.18 HUW76_03875 efflux RND transporter permease subunit low > 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01665 YicC/YloC family endoribonuclease 0.32 ABZR88_RS19050 efflux RND transporter permease subunit — —
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS18780 YicC family protein 0.33 CA265_RS17650 acriflavin resistance protein low > 88
Bacteroides thetaiotaomicron VPI-5482 0.17 BT_2008 hypothetical protein (RefSeq) 0.30 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS10050 YicC family protein 0.32 HMPREF1078_RS05470 efflux RND transporter permease subunit — —
Bacteroides stercoris CC31F 0.16 HMPREF1181_RS07870 YicC family protein 0.31 HMPREF1181_RS09455 efflux RND transporter permease subunit low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_2830 TIGR00255 family protein 0.33 Echvi_0681 Cation/multidrug efflux pump low > 79
Bacteroides ovatus ATCC 8483 0.16 BACOVA_01437 hypothetical protein 0.31 BACOVA_03090 RND transporter, HAE1 family low > 94

Not shown: 45 genomes with orthologs for A4249_RS06780 only; 1 genomes with orthologs for A4249_RS07780 only