Conservation of cofitness between Sama_0886 and Sama_2820 in Shewanella amazonensis SB2B

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0886 hypothetical protein (RefSeq) 1.0 Sama_2820 apaG ApaG (RefSeq) 0.40 4
Shewanella sp. ANA-3 0.81 Shewana3_3020 hypothetical protein (RefSeq) 0.74 Shewana3_3210 apaG ApaG (RefSeq) low > 73
Shewanella oneidensis MR-1 0.81 SO1354 hemolysin protein, putative (NCBI ptt file) 0.72 SO3640 apaG apaG protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_1060 hypothetical protein (RefSeq) 0.66 Shew_0878 apaG ApaG (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_02980 HlyC/CorC family transporter 0.51 CSW01_02320 Co2+/Mg2+ efflux protein ApaG low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_01294 Hemolysin C 0.43 MIT1002_00780 CO2+/MG2+ efflux protein ApaG low > 70
Klebsiella michiganensis M5al 0.63 BWI76_RS21540 membrane protein 0.52 BWI76_RS04515 Co2+/Mg2+ efflux protein ApaG low > 92
Klebsiella pneumoniae MKP103 0.62 KDGMDA_02235 magnesium/cobalt efflux protein 0.53 KDGMDA_12740 Co2+/Mg2+ efflux protein ApaG low > 95
Pantoea sp. MT58 0.62 IAI47_04360 HlyC/CorC family transporter 0.50 IAI47_16090 Co2+/Mg2+ efflux protein ApaG low > 76
Erwinia amylovora T8 0.61 OLJFJH_09640 magnesium/cobalt efflux protein 0.48 OLJFJH_01375 Co2+/Mg2+ efflux protein ApaG low > 58
Enterobacter sp. TBS_079 0.61 MPMX20_03482 hypothetical protein 0.51 MPMX20_00746 Protein ApaG low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2715 Putative Mg2+ and Co2+ transporter CorB 0.51 EX28DRAFT_3644 Uncharacterized protein affecting Mg2+/Co2+ transport low > 76
Erwinia tracheiphila SCR3 0.61 LU632_RS15680 HlyC/CorC family transporter 0.53 LU632_RS02735 apaG Co2+/Mg2+ efflux protein ApaG low > 74
Escherichia fergusonii Becca 0.61 EFB2_01280 hypothetical protein 0.52 EFB2_03993 Protein ApaG low > 86
Escherichia coli ECOR38 0.61 HEPCGN_20280 yfjD UPF0053 inner membrane protein YfjD 0.52 HEPCGN_08830 apaG Co2+/Mg2+ efflux protein ApaG low > 88
Rahnella sp. WP5 0.61 EX31_RS07740 HlyC/CorC family transporter 0.51 EX31_RS03785 Co2+/Mg2+ efflux protein ApaG low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01094 hypothetical protein 0.52 OHPLBJKB_03606 Protein ApaG low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4166 Hemolysins and related proteins containing CBS domains 0.50 GFF191 ApaG protein low > 78
Escherichia coli ECRC62 0.61 BNILDI_11640 yfjD UPF0053 inner membrane protein YfjD 0.52 BNILDI_08420 apaG Co2+/Mg2+ efflux protein ApaG low > 75
Escherichia coli ECOR27 0.61 NOLOHH_12835 yfjD UPF0053 inner membrane protein YfjD 0.52 NOLOHH_03185 apaG Co2+/Mg2+ efflux protein ApaG low > 76
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_01545 UPF0053 inner membrane protein YfjD 0.53 IJEDHG_06160 apaG Co2+/Mg2+ efflux protein ApaG low > 61
Escherichia coli ECRC99 0.61 KEDOAH_07060 yfjD UPF0053 inner membrane protein YfjD 0.52 KEDOAH_17315 apaG Co2+/Mg2+ efflux protein ApaG — —
Escherichia coli ECRC98 0.61 JDDGAC_24825 yfjD UPF0053 inner membrane protein YfjD 0.52 JDDGAC_14435 apaG Co2+/Mg2+ efflux protein ApaG low > 87
Escherichia coli ECRC100 0.61 OKFHMN_21160 yfjD UPF0053 inner membrane protein YfjD 0.52 OKFHMN_10840 apaG Co2+/Mg2+ efflux protein ApaG low > 79
Escherichia coli ECRC102 0.60 NIAGMN_18930 yfjD UPF0053 inner membrane protein YfjD 0.52 NIAGMN_08690 apaG Co2+/Mg2+ efflux protein ApaG low > 80
Escherichia coli Nissle 1917 0.60 ECOLIN_RS14760 HlyC/CorC family transporter 0.52 ECOLIN_RS00280 Co2+/Mg2+ efflux protein ApaG low > 55
Escherichia coli BW25113 0.60 b4461 yfjD predicted inner membrane protein (RefSeq) 0.52 b0050 apaG hypothetical protein (NCBI) low > 76
Serratia liquefaciens MT49 0.60 IAI46_03905 HlyC/CorC family transporter 0.56 IAI46_03240 Co2+/Mg2+ efflux protein ApaG 0.41 77
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS16605 DUF21 domain-containing protein 0.50 PagCFBP13505_RS12905 Co2+/Mg2+ efflux protein ApaG low > 74
Escherichia coli BL21 0.58 ECD_02501 UPF0053 family inner membrane protein 0.52 ECD_00054 protein associated with Co2+ and Mg2+ efflux low > 61
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_2258 Putative Mg2+ and Co2+ transporter CorB 0.53 B158DRAFT_0584 Uncharacterized protein affecting Mg2+/Co2+ transport low > 40
Pseudomonas segetis P6 0.52 MPMX49_01566 hypothetical protein 0.55 MPMX49_00878 Protein ApaG low > 75
Pseudomonas stutzeri RCH2 0.52 Psest_3136 Putative Mg2+ and Co2+ transporter CorB 0.52 Psest_3669 Uncharacterized protein affecting Mg2+/Co2+ transport low > 67
Paraburkholderia graminis OAS925 0.41 ABIE53_003593 Mg2+/Co2+ transporter CorB 0.42 ABIE53_003637 ApaG protein low > 113
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS27300 HlyC/CorC family transporter 0.42 QEN71_RS27535 Co2+/Mg2+ efflux protein ApaG low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS17140 magnesium and cobalt efflux protein CorC 0.43 BPHYT_RS17375 magnesium transporter ApaG low > 109
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS01840 HlyC/CorC family transporter 0.47 ABZR87_RS02125 Co2+/Mg2+ efflux protein ApaG low > 80
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS01775 hypothetical protein 0.50 HSERO_RS19420 cobalt transporter — —
Methylophilus sp. DMC18 0.39 GFF1740 hypothetical protein 0.44 GFF2791 Protein ApaG low > 43
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS06175 HlyC/CorC family transporter 0.49 RALBFv3_RS06470 Co2+/Mg2+ efflux protein ApaG low > 76
Ralstonia solanacearum UW163 0.39 UW163_RS07450 HlyC/CorC family transporter 0.49 UW163_RS07155 Co2+/Mg2+ efflux protein ApaG — —
Ralstonia solanacearum PSI07 0.39 RPSI07_RS11065 HlyC/CorC family transporter 0.49 RPSI07_RS10770 Co2+/Mg2+ efflux protein ApaG low > 81
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_06258 Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains 0.42 H281DRAFT_05718 ApaG protein low > 103
Ralstonia solanacearum GMI1000 0.38 RS_RS14125 HlyC/CorC family transporter 0.50 RS_RS14415 Co2+/Mg2+ efflux protein ApaG low > 80
Pseudomonas aeruginosa PA14 0.35 IKLFDK_19135 magnesium/cobalt efflux protein 0.55 IKLFDK_22455 Co2+/Mg2+ efflux protein ApaG low > 100
Sinorhizobium meliloti 1021 0.32 SMc00697 hypothetical protein 0.42 SMc02135 ApaG protein low > 103
Rhizobium sp. OAE497 0.31 ABIE40_RS17665 HlyC/CorC family transporter 0.42 ABIE40_RS02335 Co2+/Mg2+ efflux protein ApaG low > 107
Magnetospirillum magneticum AMB-1 0.30 AMB_RS19860 HlyC/CorC family transporter 0.45 AMB_RS21360 Co2+/Mg2+ efflux protein ApaG low > 64
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_876 Magnesium and cobalt efflux protein CorC 0.53 Pf1N1B4_2527 ApaG protein low > 87
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1713 Magnesium and cobalt efflux protein CorC 0.54 PfGW456L13_1199 ApaG protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_1279 CBS:Transporter-associated region 0.51 Psyr_4628 Protein of unknown function DUF525 low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_1279 CBS:Transporter-associated region 0.51 Psyr_4628 Protein of unknown function DUF525 low > 86
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06420 transporter 0.51 AO356_14330 magnesium transporter ApaG low > 104
Pseudomonas sp. SVBP6 0.26 COO64_RS04865 transporter associated domain-containing protein 0.52 COO64_RS22515 apaG Co2+/Mg2+ efflux protein ApaG low > 93
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_04400 transporter 0.52 AO353_07320 magnesium transporter ApaG low > 101
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3152 Magnesium and cobalt efflux protein CorC 0.52 Pf6N2E2_4804 ApaG protein low > 103
Pseudomonas putida KT2440 0.26 PP_1459 CBS domain protein 0.52 PP_0400 CO2+/MG2+ efflux protein low > 96
Pseudomonas sp. BP01 0.25 JOY50_RS11660 transporter associated domain-containing protein 0.51 JOY50_RS18135 apaG Co2+/Mg2+ efflux protein ApaG low > 84
Pseudomonas sp. DMC3 0.25 GFF1979 hypothetical protein 0.53 GFF38 Protein ApaG low > 89
Pseudomonas simiae WCS417 0.25 PS417_22935 hypothetical protein 0.49 PS417_25815 magnesium transporter ApaG low > 88
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_04736 hypothetical protein 0.50 GEMAOFIL_05283 Protein ApaG low > 93
Pseudomonas sp. RS175 0.25 PFR28_00324 hypothetical protein 0.51 PFR28_04065 Protein ApaG low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.50 PFLU_RS27470 Co2+/Mg2+ efflux protein ApaG low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS24595 DUF21 domain-containing protein 0.50 PFLU_RS27470 Co2+/Mg2+ efflux protein ApaG low > 109
Rhodopseudomonas palustris CGA009 0.21 TX73_002605 hemolysin family protein 0.41 TX73_024795 Co2+/Mg2+ efflux protein ApaG low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS17090 hemolysin family protein 0.34 ABZR88_RS22335 Co2+/Mg2+ efflux protein ApaG low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_17530 hemolysin 0.38 CA264_04725 Co2+/Mg2+ efflux protein ApaG low > 74
Cellulophaga baltica 18 0.16 M666_RS02460 hemolysin family protein 0.33 M666_RS08625 Co2+/Mg2+ efflux protein ApaG low > 67

Not shown: 10 genomes with orthologs for Sama_0886 only; 30 genomes with orthologs for Sama_2820 only