| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Shewanella amazonensis SB2B | 1.0 | Sama_2211 | | alpha-ketoglutarate TRAP transporter, large permease component (from data) | 1.0 | Sama_1087 | | glutathione S-transferase family protein (RefSeq) | 0.36 | 19 |
| Shewanella oneidensis MR-1 | 0.87 | SO3136 | dctM | C4-dicarboxylate transport protein (NCBI ptt file) | 0.80 | SO1576 | | glutathione S-transferase family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.87 | Shewana3_1414 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | 0.81 | Shewana3_2866 | | glutathione S-transferase domain-containing protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.84 | Shew_1444 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), large permease component (from data) | 0.34 | Shew_2458 | | glutathione S-transferase domain-containing protein (RefSeq) | low | > 60 |
| Pseudomonas sp. RS175 | 0.55 | PFR28_00121 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.40 | PFR28_01289 | | Disulfide-bond oxidoreductase YfcG | low | > 88 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS05060 | | TRAP transporter large permease | 0.33 | ABCV34_RS06070 | | glutathione-dependent disulfide-bond oxidoreductase | low | > 48 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_09640 | | C4-dicarboxylate ABC transporter permease | 0.78 | CSW01_17150 | | thiol:disulfide oxidoreductase | low | > 62 |
| Pseudomonas fluorescens SBW25 | 0.49 | PFLU_RS16920 | | TRAP transporter large permease | 0.45 | PFLU_RS06500 | | thiol:disulfide oxidoreductase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.49 | PFLU_RS16920 | | TRAP transporter large permease | 0.45 | PFLU_RS06500 | | thiol:disulfide oxidoreductase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.49 | PS417_14900 | | C4-dicarboxylate ABC transporter permease | 0.46 | PS417_06435 | | glutathione S-transferase | low | > 88 |
| Azospirillum brasilense Sp245 | 0.44 | AZOBR_RS09595 | | C4-dicarboxylate ABC transporter permease | 0.45 | AZOBR_RS16635 | | glutathione S-transferase | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS04550 | | C4-dicarboxylate ABC transporter permease | 0.45 | AMB_RS13360 | | thiol:disulfide oxidoreductase | low | > 64 |
| Dechlorosoma suillum PS | 0.43 | Dsui_3153 | | TRAP transporter, DctM subunit | 0.47 | Dsui_0688 | | glutathione S-transferase | low | > 51 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS04250 | | C4-dicarboxylate ABC transporter permease | 0.50 | HSERO_RS15120 | | glutathione S-transferase | low | > 78 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A3676 | | TRAP dicarboxylate transporter, DctM subunit (NCBI) | 0.42 | Rru_A0332 | | Glutathione S-transferase-like (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_010560 | | TRAP transporter large permease subunit | 0.46 | TX73_011260 | | glutathione S-transferase N-terminal domain-containing protein | low | > 86 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_00661 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.45 | MPMX19_04234 | | Disulfide-bond oxidoreductase YfcG | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.31 | Ac3H11_163 | | TRAP-type C4-dicarboxylate transport system, large permease component | 0.42 | Ac3H11_1992 | | Glutathione S-transferase (EC 2.5.1.18) | low | > 79 |
| Variovorax sp. SCN45 | 0.31 | GFF6470 | | TRAP-type C4-dicarboxylate transport system, large permease component | 0.48 | GFF1073 | | Glutathione S-transferase (EC 2.5.1.18) | low | > 127 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS19635 | | TRAP transporter large permease | 0.48 | ABID97_RS14560 | | glutathione binding-like protein | low | > 91 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_04347 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.46 | MPMX20_03237 | | Disulfide-bond oxidoreductase YfcG | low | > 85 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS18670 | | TRAP transporter large permease | 0.45 | ABIE41_RS18300 | | glutathione S-transferase N-terminal domain-containing protein | low | > 77 |
| Rahnella sp. WP5 | 0.26 | EX31_RS08020 | | TRAP transporter large permease | 0.50 | EX31_RS19525 | | GSH-dependent disulfide bond oxidoreductase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.26 | SM_b20297 | | permease | 0.41 | SMc02390 | | glutathione S-transferase | low | > 103 |
| Pectobacterium carotovorum WPP14 | 0.25 | HER17_RS19685 | | TRAP transporter large permease | 0.46 | HER17_RS07060 | | GSH-dependent disulfide bond oxidoreductase | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_485 | | TRAP-type C4-dicarboxylate transport system, large permease component | 0.41 | Pf6N2E2_2148 | | Glutathione S-transferase (EC 2.5.1.18) | low | > 103 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_02428 | | Neu5Ac permease | 0.61 | MIT1002_03773 | | Disulfide-bond oxidoreductase YfcG | low | > 70 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_23045 | | hypothetical protein | 0.42 | AO356_01380 | | glutathione S-transferase | low | > 104 |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS25810 | | TRAP transporter large permease | 0.45 | ABIE40_RS03675 | | glutathione binding-like protein | low | > 107 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_11090 | dctQ | Tripartite ATP-independent periplasmic transporter, DctM component | 0.45 | NOLOHH_14385 | yfcG | GSH-dependent disulfide bond oxidoreductase | low | > 57 |
| Klebsiella michiganensis M5al | 0.25 | BWI76_RS24135 | | c4-dicarboxylate permease | 0.45 | BWI76_RS20290 | | thiol:disulfide oxidoreductase | low | > 92 |
| Caulobacter crescentus NA1000 | 0.25 | CCNA_01515 | | C4-dicarboxylate transporter large subunit | 0.40 | CCNA_01376 | | glutathione S-transferase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.25 | CCNA_01515 | | C4-dicarboxylate transporter large subunit | 0.40 | CCNA_01376 | | glutathione S-transferase | low | > 67 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.25 | GFF795 | | TRAP-type C4-dicarboxylate transport system, large permease component | 0.63 | GFF2760 | | Glutathione S-transferase (EC 2.5.1.18) | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.25 | RR42_RS34990 | | ABC transporter permease | 0.49 | RR42_RS05710 | | glutathione S-transferase | low | > 128 |
| Pseudomonas putida KT2440 | 0.25 | PP_1167 | | D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) | 0.38 | PP_4104 | | Glutathione S-transferase family protein | low | > 96 |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_3001 | | TRAP dicarboxylate transporter, DctM subunit (RefSeq) | 0.41 | Dshi_0240 | | Glutathione S-transferase domain (RefSeq) | low | > 64 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF2273 | | Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC | 0.46 | GFF1913 | | Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog | low | > 78 |
| Lysobacter sp. OAE881 | 0.23 | ABIE51_RS02840 | | TRAP transporter large permease | 0.42 | ABIE51_RS01970 | | glutathione S-transferase N-terminal domain-containing protein | low | > 62 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_03837 | | C4-dicarboxylate TRAP transporter large permease protein DctM | 0.45 | OHPLBJKB_01403 | | Disulfide-bond oxidoreductase YfcG | low | > 73 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_07135 | | TRAP transporter large permease | 0.45 | BNILDI_13305 | yfcG | GSH-dependent disulfide bond oxidoreductase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.23 | QEN71_RS36140 | | TRAP transporter large permease | 0.52 | QEN71_RS24045 | | glutathione binding-like protein | low | > 153 |
| Escherichia coli Nissle 1917 | 0.22 | ECOLIN_RS17390 | | TRAP transporter large permease subunit | 0.45 | ECOLIN_RS13360 | | GSH-dependent disulfide bond oxidoreductase | — | — |
| Escherichia coli ECOR38 | 0.22 | HEPCGN_01270 | | C4-dicarboxylate ABC transporter | 0.45 | HEPCGN_21970 | yfcG | GSH-dependent disulfide bond oxidoreductase | low | > 85 |
| Ralstonia sp. UNC404CL21Col | 0.21 | ABZR87_RS21100 | | TRAP transporter large permease | 0.49 | ABZR87_RS14710 | | glutathione binding-like protein | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.21 | H281DRAFT_05326 | | TRAP transporter, DctM subunit | 0.51 | H281DRAFT_04590 | | glutathione S-transferase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.21 | ABIE53_006500 | | tripartite ATP-independent transporter DctM subunit | 0.52 | ABIE53_001613 | | GST-like protein | low | > 113 |
| Escherichia fergusonii Becca | 0.21 | EFB2_00228 | | Sialic acid TRAP transporter large permease protein SiaM | 0.45 | EFB2_01556 | | Disulfide-bond oxidoreductase YfcG | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.21 | Xcc-8004.203.1 | | TRAP-type C4-dicarboxylate transport system, large permease component | 0.43 | Xcc-8004.5030.1 | | Glutathione S-transferase (EC 2.5.1.18) | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.21 | BPHYT_RS24185 | | C4-dicarboxylate ABC transporter permease | 0.53 | BPHYT_RS06735 | | glutathione S-transferase | low | > 109 |
| Escherichia coli BL21 | 0.19 | ECD_03430 | | 2,3-diketo-L-gulonate TRAP transporter large permease protein | 0.45 | ECD_02227 | | GSH-dependent disulfide bond oxidoreductase | low | > 60 |
| Escherichia coli BW25113 | 0.19 | b3578 | yiaN | predicted transporter (NCBI) | 0.45 | b2302 | yfcG | predicted glutathione S-transferase (NCBI) | low | > 76 |
Not shown: 9 genomes with orthologs for Sama_2211 only; 26 genomes with orthologs for Sama_1087 only