Conservation of cofitness between BT3394 and BT2077 in Bacteroides thetaiotaomicron VPI-5482

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3394 putative arginine decarboxylase (NCBI ptt file) 1.0 BT2077 acetolactate synthase large subunit (NCBI ptt file) 0.82 10
Bacteroides ovatus ATCC 8483 0.99 BACOVA_01911 arginine 2-monooxygenase 0.92 BACOVA_03303 acetolactate synthase, large subunit, biosynthetic type 0.59 27
Bacteroides stercoris CC31F 0.93 HMPREF1181_RS02535 biosynthetic arginine decarboxylase 0.87 HMPREF1181_RS08330 biosynthetic-type acetolactate synthase large subunit low > 56
Phocaeicola vulgatus CL09T03C04 0.92 HMPREF1058_RS12110 biosynthetic arginine decarboxylase 0.84 HMPREF1058_RS16820 biosynthetic-type acetolactate synthase large subunit 0.56 23
Phocaeicola dorei CL03T12C01 0.92 ABI39_RS04690 biosynthetic arginine decarboxylase 0.85 ABI39_RS12720 biosynthetic-type acetolactate synthase large subunit 0.68 23
Parabacteroides merdae CL09T00C40 0.91 HMPREF1078_RS15005 biosynthetic arginine decarboxylase 0.66 HMPREF1078_RS16690 biosynthetic-type acetolactate synthase large subunit low > 61
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_1037 speA arginine decarboxylase 0.40 Synpcc7942_0139 ilvB acetolactate synthase 3 catalytic subunit
Alteromonas macleodii MIT1002 0.45 MIT1002_03905 Biosynthetic arginine decarboxylase 0.38 MIT1002_00503 Acetolactate synthase isozyme 3 large subunit low > 70
Pectobacterium carotovorum WPP14 0.43 HER17_RS02665 biosynthetic arginine decarboxylase 0.40 HER17_RS01060 acetolactate synthase 2 catalytic subunit low > 75
Dickeya dianthicola 67-19 0.42 HGI48_RS18460 biosynthetic arginine decarboxylase 0.42 HGI48_RS20310 acetolactate synthase 2 catalytic subunit low > 71
Escherichia coli BL21 0.42 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding 0.42 ECD_03646 acetolactate synthase II, valine insensitive, large subunit low > 60
Escherichia coli BW25113 0.42 b2938 speA arginine decarboxylase (NCBI) 0.38 b0077 ilvI acetolactate synthase III large subunit (NCBI) low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS19595 biosynthetic arginine decarboxylase 0.41 DZA65_RS21350 acetolactate synthase 2 catalytic subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_00778 Biosynthetic arginine decarboxylase 0.43 OHPLBJKB_04285 Acetolactate synthase isozyme 2 large subunit low > 73
Escherichia coli ECOR38 0.42 HEPCGN_18610 speA biosynthetic arginine decarboxylase 0.43 HEPCGN_13365 ilvG acetolactate synthase 2 catalytic subunit low > 85
Escherichia coli Nissle 1917 0.42 ECOLIN_RS16350 biosynthetic arginine decarboxylase 0.43 ECOLIN_RS21650 acetolactate synthase 2 catalytic subunit low > 52
Shewanella sp. ANA-3 0.42 Shewana3_1624 arginine decarboxylase (RefSeq) 0.39 Shewana3_0356 acetolactate synthase 2 catalytic subunit (RefSeq) low > 73
Escherichia coli ECRC62 0.42 BNILDI_09755 speA biosynthetic arginine decarboxylase 0.43 BNILDI_04735 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC98 0.42 JDDGAC_22935 speA biosynthetic arginine decarboxylase 0.43 JDDGAC_18275 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECRC99 0.42 KEDOAH_08835 speA biosynthetic arginine decarboxylase 0.43 KEDOAH_13495 ilvG acetolactate synthase 2 catalytic subunit
Escherichia coli ECOR27 0.42 NOLOHH_11175 speA biosynthetic arginine decarboxylase 0.43 NOLOHH_06790 ilvG acetolactate synthase 2 catalytic subunit low > 57
Escherichia fergusonii Becca 0.42 EFB2_00962 Biosynthetic arginine decarboxylase 0.43 EFB2_04868 Acetolactate synthase isozyme 2 large subunit low > 86
Escherichia coli ECRC101 0.42 MCAODC_09825 speA biosynthetic arginine decarboxylase 0.43 MCAODC_05160 ilvG acetolactate synthase 2 catalytic subunit
Dickeya dadantii 3937 0.42 DDA3937_RS18535 biosynthetic arginine decarboxylase 0.42 DDA3937_RS20170 acetolactate synthase 2 catalytic subunit low > 74
Klebsiella michiganensis M5al 0.42 BWI76_RS24030 arginine decarboxylase 0.43 BWI76_RS00960 acetolactate synthase 2 catalytic subunit low > 92
Escherichia coli ECRC101 0.42 OKFHMN_19305 speA biosynthetic arginine decarboxylase 0.43 OKFHMN_14655 ilvG acetolactate synthase 2 catalytic subunit
Enterobacter asburiae PDN3 0.42 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) 0.43 EX28DRAFT_4440 acetolactate synthase, large subunit (EC 2.2.1.6) low > 76
Escherichia coli ECRC102 0.42 NIAGMN_17070 speA biosynthetic arginine decarboxylase 0.43 NIAGMN_12410 ilvG acetolactate synthase 2 catalytic subunit
Serratia liquefaciens MT49 0.42 IAI46_21140 biosynthetic arginine decarboxylase 0.40 IAI46_24360 acetolactate synthase 2 catalytic subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.43 GFF2904 Acetolactate synthase large subunit (EC 2.2.1.6) low > 78
Enterobacter sp. TBS_079 0.42 MPMX20_03799 Biosynthetic arginine decarboxylase 0.43 MPMX20_04502 Acetolactate synthase isozyme 2 large subunit low > 85
Pantoea sp. MT58 0.42 IAI47_03660 biosynthetic arginine decarboxylase 0.41 IAI47_01020 acetolactate synthase 2 catalytic subunit low > 76
Shewanella loihica PV-4 0.42 Shew_1619 arginine decarboxylase (RefSeq) 0.40 Shew_0289 acetolactate synthase 2 catalytic subunit (RefSeq)
Rahnella sp. WP5 0.42 EX31_RS21355 biosynthetic arginine decarboxylase 0.41 EX31_RS14990 acetolactate synthase 2 catalytic subunit low > 89
Shewanella oneidensis MR-1 0.42 SO1870 speA biosynthetic arginine decarboxylase (NCBI ptt file) 0.39 SO4347 ilvG acetolactate synthase II, large subunit (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.41 LU632_RS05510 speA biosynthetic arginine decarboxylase 0.41 LU632_RS24415 ilvG acetolactate synthase 2 catalytic subunit low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.41 DVU0417 speA arginine decarboxylase (TIGR) 0.43 DVU1376 ilvB-2 acetolactate synthase, large subunit, biosynthetic type (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.41 DvMF_1536 arginine decarboxylase (RefSeq) 0.43 DvMF_0153 acetolactate synthase, large subunit, biosynthetic type (RefSeq) low > 51
Shewanella amazonensis SB2B 0.41 Sama_1963 arginine decarboxylase (RefSeq) 0.39 Sama_3281 acetolactate synthase 2 catalytic subunit (RefSeq) low > 62
Marinobacter adhaerens HP15 0.41 HP15_272 biosynthetic arginine decarboxylase 0.37 HP15_531 acetolactate synthase, large subunit, biosynthetic type low > 73
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.4909.1 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.39 Xcc-8004.1059.1 Acetolactate synthase large subunit (EC 2.2.1.6)
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_18235 arginine decarboxylase 0.39 CSW01_12565 acetolactate synthase 3 large subunit low > 62
Rhodanobacter denitrificans MT42 0.40 LRK55_RS08900 arginine decarboxylase 0.29 LRK55_RS09950 biosynthetic-type acetolactate synthase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_15625 speA biosynthetic arginine decarboxylase 0.28 OKGIIK_13610 ilvB biosynthetic-type acetolactate synthase large subunit
Lysobacter sp. OAE881 0.39 ABIE51_RS00125 arginine decarboxylase 0.41 ABIE51_RS17550 acetolactate synthase 2 catalytic subunit
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_43 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.36 PfGW456L13_1538 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas stutzeri RCH2 0.39 Psest_3366 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) 0.38 Psest_1036 acetolactate synthase, large subunit, biosynthetic type
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1296 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) 0.36 Pf1N1B4_2878 Acetolactate synthase large subunit (EC 2.2.1.6) low > 87
Pseudomonas sp. S08-1 0.39 OH686_07545 arginine decarboxylase 0.37 OH686_08130 acetolactate synthase, large subunit, biosynthetic type low > 80
Pseudomonas simiae WCS417 0.39 PS417_03005 arginine decarboxylase 0.36 PS417_23810 acetolactate synthase 3 catalytic subunit low > 88
Pseudomonas fluorescens SBW25 0.39 PFLU_RS03080 arginine decarboxylase 0.37 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS03080 arginine decarboxylase 0.37 PFLU_RS25650 acetolactate synthase 3 large subunit
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 0.36 Pf6N2E2_5175 Acetolactate synthase large subunit (EC 2.2.1.6) low > 103
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS15580 biosynthetic arginine decarboxylase 0.31 ABZR86_RS15935 biosynthetic-type acetolactate synthase large subunit
Pseudomonas sp. RS175 0.39 PFR28_05228 Biosynthetic arginine decarboxylase 0.36 PFR28_03699 Acetolactate synthase isozyme 3 large subunit low > 88
Pseudomonas putida KT2440 0.38 PP_0567 Biosynthetic arginine decarboxylase 0.37 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase low > 96
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_08155 arginine decarboxylase 0.36 AO356_16170 acetolactate synthase 3 catalytic subunit low > 104
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4381 arginine decarboxylase 0.37 Psyr_0846 acetolactate synthase, large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4381 arginine decarboxylase 0.37 Psyr_0846 acetolactate synthase, large subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_13720 arginine decarboxylase 0.36 AO353_14495 acetolactate synthase 3 catalytic subunit low > 101
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS09140 arginine decarboxylase 0.29 LRK54_RS10310 biosynthetic-type acetolactate synthase large subunit

Not shown: 1 genomes with orthologs for BT3394 only; 41 genomes with orthologs for BT2077 only