Conservation of cofitness between b2913 and b3770 in Escherichia coli BW25113

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2913 serA D-3-phosphoglycerate dehydrogenase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.88 19
Escherichia coli ECOR27 1.00 NOLOHH_11370 serA phosphoglycerate dehydrogenase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC102 1.00 NIAGMN_17225 serA phosphoglycerate dehydrogenase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 1.00 JDDGAC_23100 serA phosphoglycerate dehydrogenase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 MCAODC_09980 serA phosphoglycerate dehydrogenase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli BL21 1.00 ECD_02744 D-3-phosphoglycerate dehydrogenase 1.00 ECD_03648 branched-chain amino acid aminotransferase 0.76 12
Escherichia coli ECRC101 1.00 OKFHMN_19460 serA phosphoglycerate dehydrogenase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR38 1.00 HEPCGN_18760 serA phosphoglycerate dehydrogenase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00803 D-3-phosphoglycerate dehydrogenase 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS16210 phosphoglycerate dehydrogenase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli ECRC99 1.00 KEDOAH_08680 serA phosphoglycerate dehydrogenase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia fergusonii Becca 1.00 EFB2_00990 D-3-phosphoglycerate dehydrogenase 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC62 1.00 BNILDI_09905 serA phosphoglycerate dehydrogenase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Klebsiella michiganensis M5al 0.93 BWI76_RS23920 D-3-phosphoglycerate dehydrogenase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase 0.50 86
Enterobacter sp. TBS_079 0.93 MPMX20_03771 D-3-phosphoglycerate dehydrogenase 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2965 Phosphoglycerate dehydrogenase and related dehydrogenases 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I — —
Pantoea sp. MT58 0.87 IAI47_03725 phosphoglycerate dehydrogenase 0.91 IAI47_01030 branched-chain amino acid transaminase 0.92 3
Erwinia tracheiphila SCR3 0.86 LU632_RS05855 serA phosphoglycerate dehydrogenase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.65 56
Pectobacterium carotovorum WPP14 0.85 HER17_RS02725 phosphoglycerate dehydrogenase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Serratia liquefaciens MT49 0.85 IAI46_20900 phosphoglycerate dehydrogenase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Dickeya dadantii 3937 0.83 DDA3937_RS18480 phosphoglycerate dehydrogenase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.81 27
Rahnella sp. WP5 0.82 EX31_RS21470 phosphoglycerate dehydrogenase 0.90 EX31_RS15000 branched-chain amino acid transaminase 0.70 85
Dickeya dianthicola 67-19 0.82 HGI48_RS18400 phosphoglycerate dehydrogenase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Dickeya dianthicola ME23 0.82 DZA65_RS19540 phosphoglycerate dehydrogenase 0.91 DZA65_RS21340 branched-chain amino acid transaminase 0.63 38
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_12555 phosphoglycerate dehydrogenase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Alteromonas macleodii MIT1002 0.71 MIT1002_02993 D-3-phosphoglycerate dehydrogenase 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.82 45
Shewanella loihica PV-4 0.70 Shew_3196 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.93 44
Shewanella oneidensis MR-1 0.70 SO0862 serA D-3-phosphoglycerate dehydrogenase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_3416 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.69 Sama_2949 D-3-phosphoglycerate dehydrogenase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.63 59
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas sp. S08-1 0.67 OH686_11280 D-3-phosphoglycerate dehydrogenase 0.46 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_943 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2272 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_08510 3-phosphoglycerate dehydrogenase 0.20 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas sp. RS175 0.66 PFR28_04842 D-3-phosphoglycerate dehydrogenase 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Pseudomonas stutzeri RCH2 0.66 Psest_3873 Phosphoglycerate dehydrogenase and related dehydrogenases 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) — —
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_3932 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.38 87
Pseudomonas putida KT2440 0.66 PP_5155 D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase 0.79 6
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_10300 3-phosphoglycerate dehydrogenase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4790 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS28695 phosphoglycerate dehydrogenase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas simiae WCS417 0.65 PS417_27040 3-phosphoglycerate dehydrogenase 0.21 PS417_17565 branched-chain amino acid aminotransferase 0.39 84
Marinobacter adhaerens HP15 0.65 HP15_2554 D-3-phosphoglycerate dehydrogenase-like protein 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS09635 phosphoglycerate dehydrogenase 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.94 16
Variovorax sp. SCN45 0.63 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0518 Phosphoglycerate dehydrogenase and related dehydrogenases 0.20 B158DRAFT_0078 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 40
Acinetobacter radioresistens SK82 0.63 MPMX26_02773 D-3-phosphoglycerate dehydrogenase 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.88 11
Variovorax sp. OAS795 0.63 ABID97_RS07235 phosphoglycerate dehydrogenase 0.44 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Rhodanobacter denitrificans MT42 0.62 LRK55_RS02935 phosphoglycerate dehydrogenase 0.56 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS03185 phosphoglycerate dehydrogenase 0.56 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2931.1 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 74
Rhodanobacter sp. FW510-T8 0.61 OKGIIK_10055 serA phosphoglycerate dehydrogenase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF149 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Lysobacter sp. OAE881 0.60 ABIE51_RS13245 phosphoglycerate dehydrogenase 0.55 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Rhodospirillum rubrum S1H 0.58 Rru_A2456 Phosphoglycerate dehydrogenase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) — —
Rhizobium sp. OAE497 0.58 ABIE40_RS30040 phosphoglycerate dehydrogenase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase low > 107
Azospirillum sp. SherDot2 0.55 MPMX19_00753 D-3-phosphoglycerate dehydrogenase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS10940 3-phosphoglycerate dehydrogenase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Bosea sp. OAE506 0.55 ABIE41_RS08410 phosphoglycerate dehydrogenase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase low > 77
Castellaniella sp019104865 MT123 0.53 ABCV34_RS15150 phosphoglycerate dehydrogenase 0.45 ABCV34_RS07930 branched-chain amino acid transaminase — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS27010 D-3-phosphoglycerate dehydrogenase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Bifidobacterium breve UCC2003 0.45 BBR_RS16970 phosphoglycerate dehydrogenase 0.17 BBR_RS15210 branched-chain amino acid aminotransferase low > 34

Not shown: 0 genomes with orthologs for b2913 only; 37 genomes with orthologs for b3770 only