Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BW25113 | 1.0 | b2913 | serA | D-3-phosphoglycerate dehydrogenase (NCBI) | 1.0 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.90 | 11 |
Escherichia coli ECRC102 | 1.00 | NIAGMN_17225 | serA | phosphoglycerate dehydrogenase | 1.00 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00803 | | D-3-phosphoglycerate dehydrogenase | 1.00 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 73 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_18760 | serA | phosphoglycerate dehydrogenase | 1.00 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | low | > 85 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_23100 | serA | phosphoglycerate dehydrogenase | 1.00 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_09980 | serA | phosphoglycerate dehydrogenase | 1.00 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_08680 | serA | phosphoglycerate dehydrogenase | 1.00 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_11370 | serA | phosphoglycerate dehydrogenase | 1.00 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | low | > 57 |
Escherichia coli BL21 | 1.00 | ECD_02744 | | D-3-phosphoglycerate dehydrogenase | 1.00 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.69 | 25 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS16210 | | phosphoglycerate dehydrogenase | 0.99 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 52 |
Escherichia coli ECRC101 | 1.00 | OKFHMN_19460 | serA | phosphoglycerate dehydrogenase | 1.00 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC62 | 1.00 | BNILDI_09905 | serA | phosphoglycerate dehydrogenase | 1.00 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia fergusonii Becca | 1.00 | EFB2_00990 | | D-3-phosphoglycerate dehydrogenase | 0.99 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.95 | GFF3013 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.97 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
Klebsiella michiganensis M5al | 0.93 | BWI76_RS23920 | | D-3-phosphoglycerate dehydrogenase | 0.95 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.79 | 36 |
Enterobacter sp. TBS_079 | 0.93 | MPMX20_03771 | | D-3-phosphoglycerate dehydrogenase | 0.95 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.69 | 67 |
Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_2965 | | Phosphoglycerate dehydrogenase and related dehydrogenases | 0.94 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | — | — |
Pantoea sp. MT58 | 0.87 | IAI47_03725 | | phosphoglycerate dehydrogenase | 0.92 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
Erwinia tracheiphila SCR3 | 0.86 | LU632_RS05855 | serA | phosphoglycerate dehydrogenase | 0.86 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | low | > 74 |
Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS02725 | | phosphoglycerate dehydrogenase | 0.88 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
Serratia liquefaciens MT49 | 0.85 | IAI46_20900 | | phosphoglycerate dehydrogenase | 0.91 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.63 | 61 |
Dickeya dadantii 3937 | 0.83 | DDA3937_RS18480 | | phosphoglycerate dehydrogenase | 0.90 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
Rahnella sp. WP5 | 0.82 | EX31_RS21470 | | phosphoglycerate dehydrogenase | 0.89 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.75 | 74 |
Dickeya dianthicola 67-19 | 0.82 | HGI48_RS18400 | | phosphoglycerate dehydrogenase | 0.88 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | low | > 71 |
Dickeya dianthicola ME23 | 0.82 | DZA65_RS19540 | | phosphoglycerate dehydrogenase | 0.88 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.56 | 56 |
Vibrio cholerae E7946 ATCC 55056 | 0.74 | CSW01_12555 | | phosphoglycerate dehydrogenase | 0.79 | CSW01_13560 | | methylenetetrahydrofolate reductase | low | > 62 |
Alteromonas macleodii MIT1002 | 0.71 | MIT1002_02993 | | D-3-phosphoglycerate dehydrogenase | 0.70 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | low | > 70 |
Shewanella loihica PV-4 | 0.70 | Shew_3196 | | D-3-phosphoglycerate dehydrogenase (RefSeq) | 0.76 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.98 | 3 |
Shewanella oneidensis MR-1 | 0.70 | SO0862 | serA | D-3-phosphoglycerate dehydrogenase (NCBI ptt file) | 0.75 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.87 | 32 |
Shewanella sp. ANA-3 | 0.70 | Shewana3_3416 | | D-3-phosphoglycerate dehydrogenase (RefSeq) | 0.75 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.87 | 26 |
Shewanella amazonensis SB2B | 0.69 | Sama_2949 | | D-3-phosphoglycerate dehydrogenase (RefSeq) | 0.75 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.88 | 18 |
Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_4852 | | D-3-phosphoglycerate dehydrogenase | 0.35 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.60 | 65 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_4852 | | D-3-phosphoglycerate dehydrogenase | 0.35 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Pseudomonas sp. S08-1 | 0.67 | OH686_11280 | | D-3-phosphoglycerate dehydrogenase | 0.36 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_943 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.35 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.84 | 18 |
Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_2272 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.35 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.79 | 28 |
Pseudomonas sp. RS175 | 0.66 | PFR28_04842 | | D-3-phosphoglycerate dehydrogenase | 0.36 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | 0.66 | 6 |
Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_08510 | | 3-phosphoglycerate dehydrogenase | 0.35 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | 0.80 | 26 |
Pseudomonas stutzeri RCH2 | 0.66 | Psest_3873 | | Phosphoglycerate dehydrogenase and related dehydrogenases | 0.35 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | — | — |
Pseudomonas putida KT2440 | 0.66 | PP_5155 | | D-3-phosphoglycerate dehydrogenase / alpha-ketoglutarate reductase | 0.36 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | 0.42 | 58 |
Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_3932 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.36 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.58 | 45 |
Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_10300 | | 3-phosphoglycerate dehydrogenase | 0.35 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | 0.87 | 22 |
Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_4790 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.34 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 79 |
Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS28695 | | phosphoglycerate dehydrogenase | 0.36 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS28695 | | phosphoglycerate dehydrogenase | 0.36 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.44 | 11 |
Pseudomonas simiae WCS417 | 0.65 | PS417_27040 | | 3-phosphoglycerate dehydrogenase | 0.36 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.47 | 64 |
Marinobacter adhaerens HP15 | 0.65 | HP15_2554 | | D-3-phosphoglycerate dehydrogenase-like protein | 0.37 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.64 | ABZR86_RS09635 | | phosphoglycerate dehydrogenase | 0.35 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.95 | 10 |
Variovorax sp. SCN45 | 0.63 | GFF2538 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.32 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.49 | 86 |
Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_0518 | | Phosphoglycerate dehydrogenase and related dehydrogenases | 0.59 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | low | > 40 |
Acinetobacter radioresistens SK82 | 0.63 | MPMX26_02773 | | D-3-phosphoglycerate dehydrogenase | 0.31 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
Variovorax sp. OAS795 | 0.63 | ABID97_RS07235 | | phosphoglycerate dehydrogenase | 0.33 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 91 |
Rhodanobacter denitrificans MT42 | 0.62 | LRK55_RS02935 | | phosphoglycerate dehydrogenase | 0.35 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.62 | LRK54_RS03185 | | phosphoglycerate dehydrogenase | 0.35 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.63 | 41 |
Xanthomonas campestris pv. campestris strain 8004 | 0.62 | Xcc-8004.2931.1 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.36 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10055 | serA | phosphoglycerate dehydrogenase | 0.35 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 52 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF149 | | D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) | 0.34 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Lysobacter sp. OAE881 | 0.60 | ABIE51_RS13245 | | phosphoglycerate dehydrogenase | 0.34 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.89 | 30 |
Rhodospirillum rubrum S1H | 0.58 | Rru_A2456 | | Phosphoglycerate dehydrogenase (NCBI) | 0.51 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | — | — |
Rhizobium sp. OAE497 | 0.58 | ABIE40_RS30040 | | phosphoglycerate dehydrogenase | 0.41 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 107 |
Azospirillum sp. SherDot2 | 0.55 | MPMX19_00753 | | D-3-phosphoglycerate dehydrogenase | 0.54 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Bosea sp. OAE506 | 0.55 | ABIE41_RS08410 | | phosphoglycerate dehydrogenase | 0.50 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 77 |
Azospirillum brasilense Sp245 | 0.55 | AZOBR_RS10940 | | 3-phosphoglycerate dehydrogenase | 0.54 | AZOBR_RS24245 | | 5 10-methylenetetrahydrofolate reductase | — | — |
Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS15150 | | phosphoglycerate dehydrogenase | 0.34 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS27010 | | D-3-phosphoglycerate dehydrogenase | 0.38 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
Bifidobacterium breve UCC2003 | 0.45 | BBR_RS16970 | | phosphoglycerate dehydrogenase | 0.24 | BBR_RS15410 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 34 |
Not shown: 0 genomes with orthologs for b2913 only; 34 genomes with orthologs for b3941 only