Conservation of cofitness between b3822 and b3149 in Escherichia coli BW25113

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3822 recQ ATP-dependent DNA helicase (NCBI) 1.0 b3149 yraO DnaA initiator-associating factor for replication initiation (NCBI) 0.20 20
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ 1.00 ECOLIN_RS18100 DnaA initiator-associating protein DiaA low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ 1.00 OHPLBJKB_00551 DnaA initiator-associating protein DiaA low > 73
Escherichia fergusonii Becca 1.00 EFB2_04815 ATP-dependent DNA helicase RecQ 1.00 EFB2_00674 DnaA initiator-associating protein DiaA low > 86
Escherichia coli ECOR27 1.00 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ 1.00 NOLOHH_10020 diaA DnaA initiator-associating protein DiaA low > 57
Escherichia coli ECRC101 1.00 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ 1.00 MCAODC_08740 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECOR38 1.00 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.99 HEPCGN_17095 diaA DnaA initiator-associating protein DiaA low > 85
Escherichia coli ECRC99 1.00 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ 1.00 KEDOAH_09930 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC62 1.00 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ 0.99 BNILDI_01510 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC102 1.00 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ 1.00 NIAGMN_15980 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC101 1.00 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ 1.00 OKFHMN_18220 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC98 1.00 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ 1.00 JDDGAC_21845 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli BL21 1.00 ECD_03701 ATP-dependent DNA helicase 1.00 ECD_03016 DnaA initiator-associating factor for replication initiation low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF248 ATP-dependent DNA helicase RecQ 0.97 GFF1518 Phosphoheptose isomerase (EC 5.3.1.-) low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_04458 ATP-dependent DNA helicase RecQ 0.99 MPMX20_04053 DnaA initiator-associating protein DiaA low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ 0.99 EX28DRAFT_3198 Phosphoheptose isomerase low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS01245 DNA helicase RecQ 0.98 BWI76_RS24925 DnaA initiator-associating protein DiaA low > 92
Pectobacterium carotovorum WPP14 0.82 HER17_RS01395 ATP-dependent DNA helicase RecQ 0.94 HER17_RS19875 DnaA initiator-associating protein DiaA low > 75
Erwinia tracheiphila SCR3 0.82 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ 0.92 LU632_RS02215 diaA DnaA initiator-associating protein DiaA low > 74
Pantoea sp. MT58 0.82 IAI47_18360 ATP-dependent DNA helicase RecQ 0.95 IAI47_02835 DnaA initiator-associating protein DiaA low > 76
Rahnella sp. WP5 0.81 EX31_RS15210 ATP-dependent DNA helicase RecQ 0.94 EX31_RS12535 DnaA initiator-associating protein DiaA low > 89
Serratia liquefaciens MT49 0.81 IAI46_00770 ATP-dependent DNA helicase RecQ 0.97 IAI46_22310 DnaA initiator-associating protein DiaA low > 86
Dickeya dianthicola ME23 0.80 DZA65_RS21045 ATP-dependent DNA helicase RecQ 0.95 DZA65_RS01670 DnaA initiator-associating protein DiaA low > 75
Dickeya dianthicola 67-19 0.80 HGI48_RS20005 ATP-dependent DNA helicase RecQ 0.95 HGI48_RS01595 DnaA initiator-associating protein DiaA low > 71
Dickeya dadantii 3937 0.80 DDA3937_RS19850 ATP-dependent DNA helicase RecQ 0.95 DDA3937_RS01700 DnaA initiator-associating protein DiaA low > 74
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_01045 DNA helicase RecQ 0.71 CSW01_03075 phosphoheptose isomerase low > 62
Shewanella oneidensis MR-1 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) 0.66 SO0298 gmhA phosphoheptose isomerase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) 0.66 Shewana3_3882 phosphoheptose isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.58 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) 0.68 Sama_3356 phosphoheptose isomerase (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) 0.66 Shew_0225 phosphoheptose isomerase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.53 MIT1002_00148 ATP-dependent DNA helicase RecQ 0.66 MIT1002_03117 DnaA initiator-associating protein DiaA low > 70
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4423 ATP-dependent DNA helicase RecQ 0.58 PfGW456L13_1640 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas putida KT2440 0.45 PP_4516 ATP-dependent DNA 3 0.58 PP_1323 factor modulating bacterial replication archosome assembly — —
Pseudomonas sp. RS175 0.45 PFR28_00788 ATP-dependent DNA helicase RecQ 0.57 PFR28_03600 Phosphoheptose isomerase — —
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS02465 ATP-dependent DNA helicase RecQ 0.46 HSERO_RS23360 phosphoheptose isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04050 ATP-dependent DNA helicase RecQ 0.57 AO356_17095 phosphoheptose isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2645 ATP-dependent DNA helicase RecQ 0.57 Pf6N2E2_5343 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3533 ATP-dependent DNA helicase RecQ 0.57 Pf1N1B4_956 Phosphoheptose isomerase (EC 5.3.1.-) — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS21920 DNA helicase RecQ 0.57 PFLU_RS04640 phosphoheptose isomerase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS21920 DNA helicase RecQ 0.57 PFLU_RS04640 phosphoheptose isomerase — —
Pseudomonas simiae WCS417 0.45 PS417_19950 ATP-dependent DNA helicase RecQ 0.58 PS417_04575 DnaA initiator-associating protein DiaA — —
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS13000 DNA helicase RecQ 0.42 LRK54_RS05630 D-sedoheptulose 7-phosphate isomerase low > 59
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_18430 ATP-dependent DNA helicase RecQ 0.57 AO353_15275 phosphoheptose isomerase — —
Dechlorosoma suillum PS 0.44 Dsui_3092 ATP-dependent DNA helicase RecQ 0.50 Dsui_0100 phosphoheptose isomerase — —
Pseudomonas stutzeri RCH2 0.44 Psest_1869 ATP-dependent DNA helicase RecQ 0.59 Psest_3273 Phosphoheptose isomerase — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.58 Psyr_4115 phosphoheptose isomerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_3738 ATP-dependent DNA helicase RecQ 0.58 Psyr_4115 phosphoheptose isomerase low > 86
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS19925 DNA helicase RecQ 0.42 ABZR86_RS18770 SIS domain-containing protein low > 74
Marinobacter adhaerens HP15 0.44 HP15_1718 ATP-dependent DNA helicase RecQ 0.31 HP15_550 phosphoheptose isomerase low > 73
Pseudomonas sp. S08-1 0.43 OH686_20670 ATP-dependent DNA helicase RecQ 0.58 OH686_08360 phosphoheptose isomerase — —
Variovorax sp. OAS795 0.43 ABID97_RS03395 DNA helicase RecQ 0.32 ABID97_RS00275 SIS domain-containing protein 0.31 47
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS19310 ATP-dependent DNA helicase RecQ 0.50 RR42_RS19730 phosphoheptose isomerase — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS18145 ATP-dependent DNA helicase RecQ 0.50 BPHYT_RS01950 phosphoheptose isomerase low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS28295 DNA helicase RecQ 0.46 QEN71_RS00665 phosphoheptose isomerase low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_003792 ATP-dependent DNA helicase RecQ 0.51 ABIE53_000472 D-sedoheptulose 7-phosphate isomerase low > 113
Rhodopseudomonas palustris CGA009 0.42 TX73_025080 DNA helicase RecQ 0.32 TX73_020660 D-sedoheptulose 7-phosphate isomerase — —
Azospirillum sp. SherDot2 0.42 MPMX19_00123 ATP-dependent DNA helicase RecQ 0.32 MPMX19_06611 Phosphoheptose isomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_06595 ATP-dependent DNA helicase RecQ 0.52 H281DRAFT_02150 phosphoheptose isomerase — —
Bacteroides ovatus ATCC 8483 0.41 BACOVA_04594 ATP-dependent DNA helicase RecQ 0.25 BACOVA_05525 SIS domain protein low > 94
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07985 DNA helicase RecQ 0.42 ABCV34_RS14310 phosphoheptose isomerase — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_3308 ATP-dependent DNA helicase RecQ 0.38 Ac3H11_4468 Phosphoheptose isomerase (EC 5.3.1.-) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF1958 ATP-dependent DNA helicase RecQ 0.37 GFF2717 Phosphoheptose isomerase (EC 5.3.1.-) — —
Variovorax sp. SCN45 0.40 GFF6415 ATP-dependent DNA helicase RecQ 0.32 GFF3737 DnaA initiator-associating protein DiaA — —

Not shown: 33 genomes with orthologs for b3822 only; 1 genomes with orthologs for b3149 only