Conservation of cofitness between b2498 and b2937 in Escherichia coli BW25113

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2498 upp uracil phosphoribosyltransferase (VIMSS) 1.0 b2937 speB agmatinase (NCBI) 0.22 19
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14185 uracil phosphoribosyltransferase 1.00 ECOLIN_RS16340 agmatinase low > 52
Escherichia fergusonii Becca 1.00 EFB2_01400 Uracil phosphoribosyltransferase 1.00 EFB2_00964 Agmatinase low > 86
Escherichia coli ECRC102 1.00 NIAGMN_19585 upp uracil phosphoribosyltransferase 1.00 NIAGMN_17080 speB agmatinase — —
Escherichia coli ECOR27 1.00 NOLOHH_13465 upp uracil phosphoribosyltransferase 1.00 NOLOHH_11185 speB agmatinase low > 57
Escherichia coli ECRC101 1.00 MCAODC_12345 upp uracil phosphoribosyltransferase 1.00 MCAODC_09835 speB agmatinase — —
Escherichia coli ECRC62 1.00 BNILDI_12275 upp uracil phosphoribosyltransferase 1.00 BNILDI_09765 speB agmatinase — —
Escherichia coli ECOR38 1.00 HEPCGN_20980 upp uracil phosphoribosyltransferase 1.00 HEPCGN_18620 speB agmatinase low > 85
Escherichia coli ECRC98 1.00 JDDGAC_25760 upp uracil phosphoribosyltransferase 1.00 JDDGAC_22945 speB agmatinase — —
Escherichia coli ECRC99 1.00 KEDOAH_06405 upp uracil phosphoribosyltransferase 1.00 KEDOAH_08825 speB agmatinase — —
Escherichia coli BL21 1.00 ECD_02390 uracil phosphoribosyltransferase 1.00 ECD_02767 agmatinase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01228 Uracil phosphoribosyltransferase 1.00 OHPLBJKB_00779 Agmatinase low > 73
Escherichia coli ECRC101 1.00 OKFHMN_21815 upp uracil phosphoribosyltransferase 1.00 OKFHMN_19315 speB agmatinase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.99 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.99 GFF3030 Agmatinase (EC 3.5.3.11) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS20945 uracil phosphoribosyltransferase 0.98 BWI76_RS24025 agmatinase low > 92
Enterobacter sp. TBS_079 0.96 MPMX20_03352 Uracil phosphoribosyltransferase 0.98 MPMX20_03798 Agmatinase low > 85
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.98 EX28DRAFT_2977 agmatinase low > 76
Pantoea sp. MT58 0.95 IAI47_05185 uracil phosphoribosyltransferase 0.79 IAI47_03665 agmatinase low > 76
Serratia liquefaciens MT49 0.94 IAI46_18880 uracil phosphoribosyltransferase 0.89 IAI46_21135 agmatinase low > 86
Erwinia tracheiphila SCR3 0.93 LU632_RS08280 upp uracil phosphoribosyltransferase 0.81 LU632_RS05515 speB agmatinase low > 74
Shewanella loihica PV-4 0.89 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.65 Shew_1621 agmatinase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11345 uracil phosphoribosyltransferase 0.64 CSW01_18230 agmatinase low > 62
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_14855 uracil phosphoribosyltransferase 0.30 AO353_18400 agmatinase low > 101
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.50 Pf1N1B4_4717 Agmatinase (EC 3.5.3.11) low > 87
Pseudomonas sp. S08-1 0.74 OH686_17985 uracil phosphoribosyltransferase 0.31 OH686_11355 agmatinase low > 80
Pseudomonas simiae WCS417 0.74 PS417_04435 uracil phosphoribosyltransferase 0.29 PS417_20180 agmatinase low > 88
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.50 PfGW456L13_2989 Agmatinase (EC 3.5.3.11) low > 87
Pseudomonas fluorescens SBW25 0.74 PFLU_RS04485 uracil phosphoribosyltransferase 0.30 PFLU_RS22120 agmatinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS04485 uracil phosphoribosyltransferase 0.30 PFLU_RS22120 agmatinase low > 109
Pseudomonas putida KT2440 0.73 PP_0746 Uracil phosphoribosyltransferase 0.49 PP_2196 agmatinase low > 96
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.30 Pf6N2E2_2655 Agmatinase (EC 3.5.3.11) low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_16565 uracil phosphoribosyltransferase 0.30 AO356_04095 agmatinase low > 104
Pseudomonas sp. RS175 0.73 PFR28_03641 Uracil phosphoribosyltransferase 0.30 PFR28_00778 Guanidinobutyrase low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.72 DVU1025 upp uracil phosphoribosyltransferase (TIGR) 0.15 DVU0421 agmatinase, putative (TIGR) — —
Rhodanobacter denitrificans MT42 0.72 LRK55_RS02920 uracil phosphoribosyltransferase 0.10 LRK55_RS05685 arginase low > 63
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS03170 uracil phosphoribosyltransferase 0.10 LRK54_RS05930 arginase low > 59
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_10040 upp uracil phosphoribosyltransferase 0.10 OKGIIK_00690 rocF arginase low > 52
Castellaniella sp019104865 MT123 0.71 ABCV34_RS15380 uracil phosphoribosyltransferase 0.16 ABCV34_RS07740 agmatinase low > 48
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.10 Xcc-8004.4985.1 Arginase (EC 3.5.3.1) low > 74
Dinoroseobacter shibae DFL-12 0.56 Dshi_0831 uracil phosphoribosyltransferase (RefSeq) 0.38 Dshi_1735 putative agmatinase (RefSeq) low > 64
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS30815 uracil phosphoribosyltransferase 0.30 RR42_RS02455 agmatinase low > 128
Bosea sp. OAE506 0.53 ABIE41_RS22700 uracil phosphoribosyltransferase 0.39 ABIE41_RS19205 agmatinase low > 77
Rhizobium sp. OAE497 0.53 ABIE40_RS00825 uracil phosphoribosyltransferase 0.37 ABIE40_RS06935 agmatinase low > 107
Phaeobacter inhibens DSM 17395 0.52 PGA1_c11960 uracil phosphoribosyltransferase Upp 0.36 PGA1_c19930 agmatinase SpeB low > 62
Sinorhizobium meliloti 1021 0.52 SMc04121 uracil phosphoribosyltransferase 0.36 SMc01802 agmatinase low > 103
Agrobacterium fabrum C58 0.52 Atu0135 uracil phosphoribosyltransferase 0.38 Atu1245 agmatinase low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.29 GFF2044 Agmatinase (EC 3.5.3.11) low > 90
Variovorax sp. OAS795 0.51 ABID97_RS16850 uracil phosphoribosyltransferase 0.31 ABID97_RS21560 agmatinase low > 91
Variovorax sp. SCN45 0.50 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.11 GFF3772 Arginase (EC 3.5.3.1) low > 127
Ralstonia solanacearum GMI1000 0.49 RS_RS10980 uracil phosphoribosyltransferase 0.17 RS_RS24710 arginase low > 80
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS03530 uracil phosphoribosyltransferase 0.17 RALBFv3_RS16300 arginase low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS10140 uracil phosphoribosyltransferase 0.17 UW163_RS17040 arginase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS13695 uracil phosphoribosyltransferase 0.17 RPSI07_RS07400 arginase low > 81
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS24390 uracil phosphoribosyltransferase 0.40 QEN71_RS11320 agmatinase low > 153
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS06415 uracil phosphoribosyltransferase 0.43 BPHYT_RS26640 agmatinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04523 uracil phosphoribosyltransferase 0.32 H281DRAFT_00178 agmatinase low > 103
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS15395 uracil phosphoribosyltransferase 0.32 ABZR87_RS16040 agmatinase low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS03500 uracil phosphoribosyltransferase 0.34 HSERO_RS08555 agmatinase 0.17 49
Azospirillum sp. SherDot2 0.45 MPMX19_02205 Uracil phosphoribosyltransferase 0.32 MPMX19_06753 Guanidinopropionase low > 112
Azospirillum brasilense Sp245 0.44 AZOBR_RS03150 uracil phosphoribosyltransferase 0.30 AZOBR_RS30775 agmatinase low > 97
Methanococcus maripaludis JJ 0.26 MMJJ_RS01490 uracil phosphoribosyltransferase 0.20 MMJJ_RS06215 agmatinase low > 28
Methanococcus maripaludis S2 0.26 MMP_RS03565 uracil phosphoribosyltransferase 0.20 MMP_RS08150 agmatinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.24 CA264_14760 uracil phosphoribosyltransferase 0.15 CA264_07575 agmatinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_0597 Uracil phosphoribosyltransferase 0.13 Echvi_3131 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family low > 79

Not shown: 35 genomes with orthologs for b2498 only; 2 genomes with orthologs for b2937 only