Conservation of cofitness between Rru_A0703 and Rru_A3322 in Rhodospirillum rubrum S1H

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A0703 Molybdate ABC transporter, permease protein (NCBI) 1.0 Rru_A3322 Transcriptional Regulator, Crp/Fnr family (NCBI) 0.63 2
Pectobacterium carotovorum WPP14 0.65 HER17_RS14740 molybdate ABC transporter permease subunit 0.22 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Magnetospirillum magneticum AMB-1 0.65 AMB_RS17215 molybdate ABC transporter permease subunit 0.40 AMB_RS22105 transcriptional regulator
Azospirillum sp. SherDot2 0.63 MPMX19_01094 Molybdenum transport system permease protein ModB 0.41 MPMX19_00212 Nitrogen fixation regulation protein FixK low > 112
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_17800 molybdate ABC transporter permease subunit 0.21 CSW01_07190 transcriptional regulator FNR low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2231 molybdate ABC transporter, permease protein 0.23 EX28DRAFT_1540 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_01391 Molybdenum transport system permease protein ModB 0.23 MPMX20_02035 Fumarate and nitrate reduction regulatory protein low > 85
Escherichia coli ECOR27 0.60 NOLOHH_23120 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia coli ECRC101 0.60 MCAODC_25910 modC molybdenum ABC transporter ATP-binding protein ModC 0.22 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECRC100 0.60 OKFHMN_06690 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Escherichia coli BW25113 0.60 b0764 modB molybdate ABC transporter permease protein (NCBI) 0.23 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) 0.27 50
Escherichia coli ECOR38 0.60 HEPCGN_01585 modB molybdate ABC transporter permease subunit 0.23 HEPCGN_25925 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Escherichia coli ECRC99 0.60 KEDOAH_21275 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_02949 Molybdenum transport system permease protein ModB 0.23 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein low > 73
Escherichia fergusonii Becca 0.60 EFB2_03342 Molybdenum transport system permease protein ModB 0.23 EFB2_02593 Fumarate and nitrate reduction regulatory protein low > 86
Serratia liquefaciens MT49 0.60 IAI46_06490 molybdate ABC transporter permease subunit 0.22 IAI46_13260 FNR family transcription factor low > 86
Escherichia coli ECRC98 0.60 JDDGAC_10345 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 86
Escherichia coli ECRC102 0.60 NIAGMN_04740 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr
Escherichia coli Nissle 1917 0.60 ECOLIN_RS04070 molybdate ABC transporter permease subunit 0.23 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr low > 55
Escherichia coli ECRC62 0.60 BNILDI_21115 modC molybdenum ABC transporter ATP-binding protein ModC 0.23 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Pantoea sp. MT58 0.59 IAI47_13560 molybdate ABC transporter permease subunit 0.23 IAI47_09580 FNR family transcription factor low > 76
Erwinia tracheiphila SCR3 0.59 LU632_RS08985 modB molybdate ABC transporter permease subunit 0.23 LU632_RS11420 FNR family transcription factor low > 74
Shewanella oneidensis MR-1 0.59 SO3864 modB molybdenum ABC transporter, permease protein (NCBI ptt file) 0.24 SO2356 etrA electron transport regulator a (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF658 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) 0.23 GFF2656 Fumarate and nitrate reduction regulatory protein low > 78
Shewanella sp. ANA-3 0.57 Shewana3_0742 modB molybdate ABC transporter permease protein (RefSeq) 0.24 Shewana3_2115 fumarate/nitrate reduction transcriptional regulator (RefSeq)
Agrobacterium fabrum C58 0.57 Atu2562 ABC transporter, membrane spanning protein (molybdate) 0.25 Atu1602 transcriptional activator, Crp family low > 89
Lysobacter sp. OAE881 0.56 ABIE51_RS11115 molybdate ABC transporter permease subunit 0.19 ABIE51_RS03805 fumarate/nitrate reduction transcriptional regulator Fnr low > 62
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_3667 molybdate ABC transporter, permease protein 0.16 Ga0059261_1530 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 68
Dinoroseobacter shibae DFL-12 0.53 Dshi_3482 molybdate ABC transporter, inner membrane subunit (RefSeq) 0.24 Dshi_0660 transcriptional regulator, Crp/Fnr family (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.52 SMc03197 molybdate ABC transporter permease 0.27 SMa1141 FNR/CRP family transcriptional regulator low > 103
Phaeobacter inhibens DSM 17395 0.48 PGA1_262p02190 molybdenum transport system permease protein ModB 0.22 PGA1_c30140 transcriptional activator protein FnrL
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.1158.1 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) 0.28 Xcc-8004.2952.1 transcriptional regulator, Crp/Fnr family low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF4670 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) 0.22 GFF4142 transcriptional regulator, Crp/Fnr family low > 90
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS10575 molybdate ABC transporter permease 0.23 HSERO_RS16020 transcriptional regulator
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_06038 molybdate transport system permease protein 0.21 H281DRAFT_01640 transcriptional regulator, Crp/Fnr family
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS19240 molybdate ABC transporter permease subunit 0.22 ABZR87_RS11180 fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS17805 molybdate ABC transporter permease subunit 0.21 QEN71_RS36970 fumarate/nitrate reduction transcriptional regulator Fnr low > 153
Paraburkholderia graminis OAS925 0.35 ABIE53_004838 molybdate transport system permease protein 0.19 ABIE53_004332 CRP/FNR family transcriptional regulator low > 113
Castellaniella sp019104865 MT123 0.33 ABCV34_RS00525 molybdate ABC transporter permease subunit 0.19 ABCV34_RS06835 helix-turn-helix domain-containing protein 0.47 33
Ralstonia solanacearum PSI07 0.33 RPSI07_RS05285 molybdate ABC transporter permease subunit 0.22 RPSI07_RS17705 fumarate/nitrate reduction transcriptional regulator Fnr low > 81
Ralstonia solanacearum GMI1000 0.32 RS_RS22640 molybdate ABC transporter permease subunit 0.22 RS_RS06430 fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS03835 molybdate ABC transporter permease 0.22 RR42_RS12875 transcriptional regulator low > 128
Ralstonia solanacearum UW163 0.32 UW163_RS20820 molybdate ABC transporter permease subunit 0.22 UW163_RS13110 fumarate/nitrate reduction transcriptional regulator Fnr
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS18310 molybdate ABC transporter permease subunit 0.22 RALBFv3_RS15650 fumarate/nitrate reduction transcriptional regulator Fnr low > 76
Shewanella loihica PV-4 0.31 Shew_0093 molybdate ABC transporter, inner membrane subunit (RefSeq) 0.23 Shew_1993 fumarate/nitrate reduction transcriptional regulator (RefSeq)
Azospirillum brasilense Sp245 0.30 AZOBR_RS21360 molybdenum ABC transporter permease 0.41 AZOBR_RS01145 Crp/Fnr family transcriptional regulator low > 97
Shewanella amazonensis SB2B 0.27 Sama_3530 molybdenum ABC transporter, permease protein (RefSeq) 0.24 Sama_1799 fumarate/nitrate reduction transcriptional regulator (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.27 Psest_3000 molybdate ABC transporter, permease protein 0.23 Psest_2538 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 0.36 45
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_05405 modB molybdate ABC transporter permease subunit 0.21 OKGIIK_00820 CRP-like protein Clp low > 52
Acidovorax sp. GW101-3H11 0.25 Ac3H11_3580 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) 0.22 Ac3H11_975 transcriptional regulator, Crp/Fnr family
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_2757 Binding-protein-dependent transport systems inner membrane component 0.20 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_2757 Binding-protein-dependent transport systems inner membrane component 0.20 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp
Rhodanobacter denitrificans MT42 0.24 LRK55_RS13755 molybdate ABC transporter permease subunit 0.22 LRK55_RS13815 cyclic nucleotide-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS14035 molybdate ABC transporter permease subunit 0.22 LRK54_RS14095 cyclic nucleotide-binding domain-containing protein 0.61 26

Not shown: 30 genomes with orthologs for Rru_A0703 only; 5 genomes with orthologs for Rru_A3322 only