| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | 1.0 | Rru_A3166 | | extracellular solute-binding protein, family 5 (NCBI) | 0.67 | 11 |
| Magnetospirillum magneticum AMB-1 | 0.78 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.52 | AMB_RS22200 | | ABC transporter substrate-binding protein | — | — |
| Azospirillum brasilense Sp245 | 0.76 | AZOBR_RS14430 | | chemotaxis protein CheY | 0.52 | AZOBR_RS03825 | | hypothetical protein | low | > 97 |
| Azospirillum sp. SherDot2 | 0.76 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.54 | MPMX19_02168 | | hypothetical protein | — | — |
| Bosea sp. OAE506 | 0.69 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | 0.35 | ABIE41_RS15835 | | extracellular solute-binding protein | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.69 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.45 | TX73_019130 | | extracellular solute-binding protein | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.67 | SMc01043 | | nitrogen assimilation regulatory protein | 0.40 | SMc02832 | | periplasmic binding protein | low | > 103 |
| Rhizobium sp. OAE497 | 0.67 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.39 | ABIE40_RS00615 | | extracellular solute-binding protein | low | > 107 |
| Agrobacterium fabrum C58 | 0.67 | Atu1446 | | two component response regulator | 0.42 | Atu0187 | | ABC transporter, substrate binding protein (peptide) | low | > 89 |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_1574 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.34 | Dshi_0655 | | extracellular solute-binding protein family 5 (RefSeq) | 0.39 | 27 |
| Pantoea sp. MT58 | 0.41 | IAI47_00450 | | nitrogen regulation protein NR(I) | 0.35 | IAI47_06615 | | ABC transporter substrate-binding protein | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_09730 | | nitrogen regulation protein NR(I) | 0.49 | AO356_24465 | | hypothetical protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | 0.50 | Pf6N2E2_584 | | ABC transporter, periplasmic substrate-binding protein | low | > 103 |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.36 | MPMX20_03143 | | hypothetical protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.40 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | 0.36 | EX28DRAFT_0384 | | ABC-type oligopeptide transport system, periplasmic component | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.50 | PFLU_RS12895 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.50 | PFLU_RS12895 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.40 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.49 | Pf1N1B4_4593 | | ABC transporter, periplasmic substrate-binding protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.50 | AO353_23475 | | hypothetical protein | low | > 101 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_425 | | two-component response regulator NtrC | 0.50 | HP15_1807 | | peptide ABC transporter, periplasmic peptide-binding protein | low | > 73 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.50 | PS417_12205 | | hypothetical protein | low | > 88 |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c14790 | | nitrogen regulation protein NtrC | 0.33 | PGA1_c30180 | | ABC transporter extracellular solute-binding protein | — | — |
| Pseudomonas sp. S08-1 | 0.40 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.48 | OH686_03600 | | ABC transporter periplasmic substrate-binding protein | low | > 80 |
| Pseudomonas sp. RS175 | 0.40 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | 0.50 | PFR28_01549 | | Oligopeptide-binding protein AppA | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.37 | MPMX26_02273 | | hypothetical protein | low | > 36 |
| Variovorax sp. SCN45 | 0.40 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.32 | GFF229 | | ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | 0.49 | PfGW456L13_3343 | | ABC transporter, periplasmic substrate-binding protein | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.40 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.48 | Psyr_1758 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.40 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.48 | Psyr_1758 | | extracellular solute-binding protein, family 5 | — | — |
| Erwinia tracheiphila SCR3 | 0.40 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | 0.35 | LU632_RS17565 | | extracellular solute-binding protein | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.38 | HER17_RS12920 | | extracellular solute-binding protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | 0.33 | HGI48_RS09230 | | ABC transporter substrate-binding protein | low | > 71 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.34 | IAI46_17315 | | ABC transporter substrate-binding protein | low | > 86 |
| Dickeya dianthicola ME23 | 0.40 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.34 | DZA65_RS09535 | | ABC transporter substrate-binding protein | low | > 75 |
| Variovorax sp. OAS795 | 0.40 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.35 | ABID97_RS16520 | | extracellular solute-binding protein | low | > 91 |
| Escherichia fergusonii Becca | 0.39 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | 0.36 | EFB2_01679 | | hypothetical protein | low | > 86 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.33 | DDA3937_RS09190 | | ABC transporter substrate-binding protein | low | > 74 |
| Pseudomonas putida KT2440 | 0.39 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.49 | PP_4147 | | microcin C transporter - periplasmic binding protein | low | > 96 |
| Rahnella sp. WP5 | 0.39 | EX31_RS15880 | | nitrogen regulation protein NR(I) | 0.35 | EX31_RS19130 | | ABC transporter substrate-binding protein | low | > 89 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | 0.36 | BNILDI_13885 | yejA | Uncharacterized protein YejA | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.39 | GFF2220 | | Nitrogen regulation protein NR(I) | 0.36 | GFF3759 | | ABC transporter, periplasmic substrate-binding protein | low | > 78 |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | 0.36 | NIAGMN_21155 | yejA | Uncharacterized protein YejA | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | 0.36 | NOLOHH_14965 | yejA | Uncharacterized protein YejA | low | > 75 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | 0.36 | MCAODC_14440 | yejA | Uncharacterized protein YejA | low | > 87 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | 0.36 | ECOLIN_RS12730 | | extracellular solute-binding protein | low | > 55 |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | 0.36 | JDDGAC_27350 | yejA | Uncharacterized protein YejA | — | — |
| Klebsiella michiganensis M5al | 0.39 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | 0.35 | BWI76_RS19780 | | antibiotic ABC transporter substrate-binding protein | low | > 92 |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | 0.36 | OKFHMN_23390 | yejA | Uncharacterized protein YejA | low | > 80 |
| Escherichia coli BW25113 | 0.39 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | 0.36 | b2177 | yejA | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | 0.36 | OHPLBJKB_01532 | | hypothetical protein | low | > 73 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | 0.36 | KEDOAH_04795 | yejA | Uncharacterized protein YejA | — | — |
| Escherichia coli BL21 | 0.39 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | 0.36 | ECD_02107 | | microcin C ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | 0.36 | HEPCGN_22655 | yejA | Uncharacterized protein YejA | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.48 | Psest_2067 | | ABC-type oligopeptide transport system, periplasmic component | low | > 67 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_13865 | | nitrogen regulation protein NR(I) | 0.39 | CSW01_17185 | | ABC transporter substrate-binding protein | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.33 | GFF4335 | | ABC transporter, periplasmic substrate-binding protein | low | > 90 |
| Paraburkholderia sabiae LMG 24235 | 0.39 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.35 | QEN71_RS06170 | | extracellular solute-binding protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.39 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.35 | BPHYT_RS12385 | | peptide ABC transporter substrate-binding protein | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.39 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.34 | ABIE53_002550 | | microcin C transport system substrate-binding protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.34 | H281DRAFT_00560 | | microcin C transport system substrate-binding protein | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.36 | RPSI07_RS18340 | | ABC transporter substrate-binding protein | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS12980 | | chemotaxis protein CheY | 0.38 | RR42_RS13385 | | peptide ABC transporter substrate-binding protein | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.35 | ABZR87_RS10680 | | extracellular solute-binding protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.36 | RALBFv3_RS15035 | | ABC transporter substrate-binding protein | — | — |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.36 | UW163_RS12505 | | ABC transporter substrate-binding protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS15680 | | chemotaxis protein CheY | 0.37 | HSERO_RS17145 | | peptide ABC transporter substrate-binding protein | low | > 78 |
| Ralstonia solanacearum GMI1000 | 0.37 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.35 | RS_RS05850 | | ABC transporter substrate-binding protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | 0.34 | Ac3H11_2911 | | ABC transporter, periplasmic substrate-binding protein | low | > 79 |
Not shown: 17 genomes with orthologs for Rru_A1678 only; 1 genomes with orthologs for Rru_A3166 only