Conservation of cofitness between Rru_A1357 and Rru_A2164 in Rhodospirillum rubrum S1H

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A1357 Transaldolase AB (NCBI) 1.0 Rru_A2164 Protein of unknown function UPF0118 (NCBI) 0.80 20
Bosea sp. OAE506 0.56 ABIE41_RS23900 transaldolase 0.39 ABIE41_RS16140 AI-2E family transporter low > 77
Rhizobium sp. OAE497 0.54 ABIE40_RS16940 transaldolase 0.41 ABIE40_RS06565 AI-2E family transporter — —
Agrobacterium fabrum C58 0.54 Atu4464 transaldolase B 0.38 Atu1142 permease — —
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS12545 transaldolase 0.34 ABZR86_RS19880 AI-2E family transporter low > 74
Alteromonas macleodii MIT1002 0.53 MIT1002_03080 Transaldolase B 0.15 MIT1002_02210 pheromone autoinducer 2 transporter — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS11000 transaldolase 0.25 ABZR87_RS00920 AI-2E family transporter low > 80
Pseudomonas stutzeri RCH2 0.52 Psest_2708 transaldolase 0.29 Psest_1476 Predicted permease low > 67
Ralstonia solanacearum GMI1000 0.52 RS_RS06170 transaldolase 0.23 RS_RS13150 AI-2E family transporter low > 80
Pseudomonas putida KT2440 0.52 PP_2168 Transaldolase 0.30 PP_1667 putative Transporter low > 96
Pseudomonas simiae WCS417 0.52 PS417_07730 transaldolase 0.31 PS417_20110 membrane protein — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS07805 transaldolase 0.31 PFLU_RS22055 AI-2E family transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS07805 transaldolase 0.31 PFLU_RS22055 AI-2E family transporter low > 109
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS15360 transaldolase 0.24 RALBFv3_RS05285 AI-2E family transporter low > 76
Ralstonia solanacearum UW163 0.51 UW163_RS12825 transaldolase 0.24 UW163_RS08340 AI-2E family transporter — —
Shewanella amazonensis SB2B 0.51 Sama_0913 transaldolase B (RefSeq) 0.13 Sama_1911 hypothetical protein (RefSeq) — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS18015 transaldolase 0.23 RPSI07_RS12015 AI-2E family transporter low > 81
Shewanella oneidensis MR-1 0.51 SO3546 tal transaldolase (NCBI ptt file) 0.13 SO2867 permease PerM, putative (NCBI ptt file) — —
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS05500 transaldolase 0.22 HSERO_RS03160 ABC transporter permease low > 78
Pseudomonas sp. S08-1 0.50 OH686_22740 transaldolase 0.27 OH686_19010 Putative permease often clustered with de novo purine synthesis low > 80
Serratia liquefaciens MT49 0.50 IAI46_18625 transaldolase 0.14 IAI46_18795 AI-2E family transporter 0.36 61
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_17325 transaldolase 0.13 CSW01_10775 AI-2E family transporter low > 62
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1914 transaldolase 0.29 Psyr_3687 Protein of unknown function UPF0118 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1914 transaldolase 0.29 Psyr_3687 Protein of unknown function UPF0118 low > 86
Lysobacter sp. OAE881 0.50 ABIE51_RS02125 transaldolase 0.32 ABIE51_RS15880 AI-2E family transporter low > 62
Enterobacter sp. TBS_079 0.50 MPMX20_03325 Transaldolase 0.17 MPMX20_03343 Putative transport protein YhhT low > 85
Shewanella sp. ANA-3 0.50 Shewana3_3147 transaldolase B (RefSeq) 0.13 Shewana3_1651 hypothetical protein (RefSeq) — —
Escherichia coli ECRC102 0.50 NIAGMN_19770 tal transaldolase 0.16 NIAGMN_19610 perM Putative permease PerM — —
Escherichia coli ECOR38 0.50 HEPCGN_21170 tal transaldolase 0.16 HEPCGN_21005 perM Putative permease PerM low > 87
Escherichia coli ECOR27 0.50 NOLOHH_13680 tal transaldolase 0.16 NOLOHH_13490 perM Putative permease PerM low > 75
Escherichia coli BL21 0.50 ECD_02355 transaldolase A 0.16 ECD_02385 putative UPF0118 family inner membrane permease low > 61
Rahnella sp. WP5 0.50 EX31_RS20280 transaldolase 0.14 EX31_RS22725 AI-2E family transporter low > 89
Escherichia coli BW25113 0.50 b2464 talA transaldolase A (NCBI) 0.16 b2493 yfgO predicted inner membrane protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.50 ECOLIN_RS14060 transaldolase 0.16 ECOLIN_RS14160 AI-2E family transporter low > 55
Escherichia coli ECRC101 0.50 MCAODC_12530 tal transaldolase 0.16 MCAODC_12370 perM Putative permease PerM low > 87
Escherichia coli ECRC62 0.50 BNILDI_12490 tal transaldolase 0.16 BNILDI_12300 perM Putative permease PerM low > 75
Escherichia coli ECRC99 0.50 KEDOAH_06220 tal transaldolase 0.16 KEDOAH_06380 perM Putative permease PerM — —
Escherichia coli ECRC100 0.50 OKFHMN_22000 tal transaldolase 0.16 OKFHMN_21840 perM Putative permease PerM low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01267 Transaldolase 0.16 OHPLBJKB_01233 Putative transport protein YhhT low > 73
Escherichia coli ECRC98 0.50 JDDGAC_25945 tal transaldolase 0.16 JDDGAC_25785 perM Putative permease PerM low > 86
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_00310 transaldolase 0.29 AO353_02670 hypothetical protein low > 101
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0197 transaldolase 0.17 EX28DRAFT_0179 Predicted permease low > 76
Escherichia fergusonii Becca 0.50 EFB2_01424 Transaldolase 0.16 EFB2_01405 Putative transport protein YhhT low > 86
Shewanella loihica PV-4 0.50 Shew_1089 transaldolase B (RefSeq) 0.14 Shew_1843 hypothetical protein (RefSeq) — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS06045 transaldolase 0.22 BPHYT_RS03635 ABC transporter permease low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1363 Transaldolase (EC 2.2.1.2) 0.22 GFF3435 Putative permease often clustered with de novo purine synthesis 0.46 82
Marinobacter adhaerens HP15 0.49 HP15_2241 transaldolase 0.16 HP15_2029 permease perM low > 73
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS24595 transaldolase 0.23 QEN71_RS26450 AI-2E family transporter low > 153
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) 0.31 Xcc-8004.1678.1 Putative permease often clustered with de novo purine synthesis low > 74
Klebsiella michiganensis M5al 0.49 BWI76_RS04270 transaldolase 0.17 BWI76_RS20920 AI-2E family transporter low > 92
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_2297 tal transaldolase/EF-hand domain-containing protein 0.12 Synpcc7942_1113 hypothetical protein low > 38
Paraburkholderia graminis OAS925 0.49 ABIE53_001416 transaldolase 0.23 ABIE53_000873 putative PurR-regulated permease PerM low > 113
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1083 Transaldolase (EC 2.2.1.2) 0.16 GFF2176 Putative permease PerM (= YfgO) low > 78
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.27 PfGW456L13_4250 Putative permease often clustered with de novo purine synthesis low > 87
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.29 Pf1N1B4_3700 Putative permease often clustered with de novo purine synthesis low > 87
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.30 Pf6N2E2_5731 Putative permease often clustered with de novo purine synthesis low > 103
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_00286 transaldolase 0.24 H281DRAFT_04709 Predicted PurR-regulated permease PerM low > 103
Pseudomonas sp. RS175 0.48 PFR28_01142 Transaldolase 0.32 PFR28_03215 Sodium-lithium/proton antiporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_02175 transaldolase 0.31 AO356_19105 hypothetical protein low > 104
Acinetobacter radioresistens SK82 0.42 MPMX26_01753 Transaldolase 0.25 MPMX26_02205 hypothetical protein low > 36

Not shown: 11 genomes with orthologs for Rru_A1357 only; 16 genomes with orthologs for Rru_A2164 only