Conservation of cofitness between Rru_A3645 and Rru_A2031 in Rhodospirillum rubrum S1H

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 1.0 Rru_A2031 Protein of unknown function UPF0075 (NCBI) 0.73 2
Magnetospirillum magneticum AMB-1 0.64 AMB_RS04415 NAD-dependent protein deacylase 0.46 AMB_RS15285 anhydro-N-acetylmuramic acid kinase low > 64
Azospirillum brasilense Sp245 0.63 AZOBR_RS00620 NAD-dependent deacetylase 0.50 AZOBR_RS05815 anhydro-N-acetylmuramic acid kinase low > 97
Azospirillum sp. SherDot2 0.62 MPMX19_02648 NAD-dependent protein deacylase 0.47 MPMX19_01987 Anhydro-N-acetylmuramic acid kinase low > 112
Klebsiella michiganensis M5al 0.60 BWI76_RS11230 NAD-dependent deacylase 0.24 BWI76_RS16420 anhydro-N-acetylmuramic acid kinase low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_01801 NAD-dependent protein deacylase 0.26 MPMX20_01998 Anhydro-N-acetylmuramic acid kinase low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.25 EX28DRAFT_1636 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 76
Escherichia coli ECRC99 0.57 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.26 KEDOAH_00620 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli ECRC100 0.57 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.26 OKFHMN_27485 anmK anhydro-N-acetylmuramic acid kinase low > 80
Escherichia coli ECRC101 0.57 MCAODC_22800 cobB NAD-dependent protein deacylase 0.26 MCAODC_17925 anmK anhydro-N-acetylmuramic acid kinase low > 87
Escherichia coli BW25113 0.57 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.26 b1640 ydhH anhydro-N-acetylmuramic acid kinase (NCBI) low > 76
Escherichia coli ECRC98 0.57 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.26 JDDGAC_02075 anmK anhydro-N-acetylmuramic acid kinase low > 86
Escherichia coli BL21 0.57 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.26 ECD_01610 anhydro-N-acetylmuramic acid kinase low > 61
Escherichia coli ECOR38 0.57 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.26 HEPCGN_05870 anmK anhydro-N-acetylmuramic acid kinase low > 87
Escherichia coli ECRC62 0.57 BNILDI_19130 cobB NAD-dependent protein deacylase 0.26 BNILDI_16795 anmK anhydro-N-acetylmuramic acid kinase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.25 GFF3634 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 78
Escherichia coli ECOR27 0.57 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.26 NOLOHH_18005 anmK anhydro-N-acetylmuramic acid kinase low > 75
Escherichia coli ECRC102 0.57 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.26 NIAGMN_00580 anmK anhydro-N-acetylmuramic acid kinase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02546 NAD-dependent protein deacylase 0.26 OHPLBJKB_02085 Anhydro-N-acetylmuramic acid kinase low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.26 ECOLIN_RS09150 anhydro-N-acetylmuramic acid kinase — —
Escherichia fergusonii Becca 0.57 EFB2_02855 NAD-dependent protein deacylase 0.26 EFB2_02352 Anhydro-N-acetylmuramic acid kinase low > 86
Pantoea sp. MT58 0.55 IAI47_11950 NAD-dependent protein deacylase 0.27 IAI47_10710 anhydro-N-acetylmuramic acid kinase low > 76
Pectobacterium carotovorum WPP14 0.55 HER17_RS08800 NAD-dependent protein deacylase 0.26 HER17_RS09280 anhydro-N-acetylmuramic acid kinase low > 75
Serratia liquefaciens MT49 0.55 IAI46_10355 NAD-dependent protein deacylase 0.26 IAI46_11350 anhydro-N-acetylmuramic acid kinase low > 86
Alteromonas macleodii MIT1002 0.54 MIT1002_02145 NAD-dependent protein deacylase 0.24 MIT1002_03153 Anhydro-N-acetylmuramic acid kinase low > 70
Dickeya dadantii 3937 0.54 DDA3937_RS12975 NAD-dependent protein deacylase 0.28 DDA3937_RS12585 anhydro-N-acetylmuramic acid kinase low > 74
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_07575 NAD-dependent protein deacylase 0.27 CSW01_03615 anhydro-N-acetylmuramic acid kinase low > 62
Dickeya dianthicola ME23 0.54 DZA65_RS13510 NAD-dependent protein deacylase 0.28 DZA65_RS13095 anhydro-N-acetylmuramic acid kinase low > 75
Erwinia tracheiphila SCR3 0.54 LU632_RS14640 cobB NAD-dependent protein deacylase 0.24 LU632_RS11250 anmK anhydro-N-acetylmuramic acid kinase low > 74
Shewanella loihica PV-4 0.54 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.26 Shew_1020 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) low > 60
Dickeya dianthicola 67-19 0.54 HGI48_RS13045 NAD-dependent protein deacylase 0.28 HGI48_RS12640 anhydro-N-acetylmuramic acid kinase low > 71
Rahnella sp. WP5 0.53 EX31_RS24540 NAD-dependent protein deacylase 0.26 EX31_RS13765 anhydro-N-acetylmuramic acid kinase low > 89
Caulobacter crescentus NA1000 0.53 CCNA_03594 SIR2 family protein 0.36 CCNA_01945 anhydro-N-acetylmuramic acid kinase low > 66
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_03594 SIR2 family protein 0.36 CCNA_01945 anhydro-N-acetylmuramic acid kinase low > 67
Shewanella oneidensis MR-1 0.51 SO1938 cobB cobB protein (NCBI ptt file) 0.27 SO1313 conserved hypothetical protein (NCBI ptt file) 0.38 41
Shewanella sp. ANA-3 0.51 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.27 Shewana3_3060 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) — —
Shewanella amazonensis SB2B 0.48 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.29 Sama_0848 anmK anhydro-N-acetylmuramic acid kinase (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.45 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.35 Dshi_2150 protein of unknown function UPF0075 (RefSeq) low > 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS09835 Sir2 family NAD-dependent protein deacetylase 0.22 ABZR88_RS18185 anhydro-N-acetylmuramic acid kinase low > 71
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_23430 NAD-dependent deacetylase 0.28 AO356_14500 anhydro-N-acetylmuramic acid kinase low > 104
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_3134 NAD-dependent protein deacetylases, SIR2 family 0.20 Echvi_0859 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 79
Variovorax sp. SCN45 0.32 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.22 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) low > 127
Pseudomonas sp. S08-1 0.31 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.26 OH686_15205 Anhydro-N-acetylmuramic acid kinase low > 80
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.26 Ac3H11_3055 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 79
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0796 NAD-dependent protein deacetylases, SIR2 family 0.26 B158DRAFT_0004 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 40
Pseudomonas stutzeri RCH2 0.30 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.26 Psest_3637 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases low > 67
Ralstonia solanacearum PSI07 0.30 RPSI07_RS18020 NAD-dependent deacylase 0.24 RPSI07_RS21585 anhydro-N-acetylmuramic acid kinase low > 81
Ralstonia solanacearum UW163 0.30 UW163_RS12820 NAD-dependent deacylase 0.24 UW163_RS01950 anhydro-N-acetylmuramic acid kinase — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS15355 NAD-dependent deacylase 0.24 RALBFv3_RS11635 anhydro-N-acetylmuramic acid kinase low > 76
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS10995 NAD-dependent deacylase 0.22 ABZR87_RS07595 anhydro-N-acetylmuramic acid kinase low > 80
Ralstonia solanacearum GMI1000 0.29 RS_RS06165 NAD-dependent deacylase 0.23 RS_RS02460 anhydro-N-acetylmuramic acid kinase low > 80
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS13055 NAD-dependent protein deacylase 0.24 RR42_RS02660 anhydro-N-acetylmuramic acid kinase low > 128
Pseudomonas putida KT2440 0.26 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.26 PP_0434 Anhydro-N-acetylmuramic acid kinase low > 96
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS29640 NAD-dependent deacetylase 0.27 BPHYT_RS16645 anhydro-N-acetylmuramic acid kinase low > 109
Rhodopseudomonas palustris CGA009 0.19 TX73_013035 NAD-dependent protein deacetylase 0.43 TX73_012725 anhydro-N-acetylmuramic acid kinase 0.28 82
Paraburkholderia graminis OAS925 0.19 ABIE53_005120 NAD-dependent SIR2 family protein deacetylase 0.28 ABIE53_003499 anhydro-N-acetylmuramic acid kinase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family 0.27 H281DRAFT_04259 anhydro-N-acetylmuramic acid kinase — —
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS05345 NAD-dependent protein deacetylase 0.27 ABZR86_RS15665 anhydro-N-acetylmuramic acid kinase low > 74
Pseudomonas fluorescens FW300-N2E2 0.16 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.27 Pf6N2E2_4838 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) low > 103
Bosea sp. OAE506 0.16 ABIE41_RS14930 Sir2 family NAD-dependent protein deacetylase 0.43 ABIE41_RS00035 anhydro-N-acetylmuramic acid kinase low > 77
Pseudomonas simiae WCS417 0.15 PS417_10540 NAD-dependent deacetylase 0.25 PS417_25650 anhydro-N-acetylmuramic acid kinase low > 88
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_26795 NAD-dependent deacetylase 0.26 AO353_07145 anhydro-N-acetylmuramic acid kinase low > 101
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS10600 NAD-dependent protein deacetylase 0.25 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase low > 109
Pseudomonas fluorescens SBW25 0.14 PFLU_RS10600 NAD-dependent protein deacetylase 0.25 PFLU_RS27305 anhydro-N-acetylmuramic acid kinase low > 109

Not shown: 6 genomes with orthologs for Rru_A3645 only; 23 genomes with orthologs for Rru_A2031 only