Homologs of Xcc-8004.611.1 from Xanthomonas campestris pv. campestris strain 8004

Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.611.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 100 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02835 type I restriction endonuclease subunit R insig. 83 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4436 type I site-specific deoxyribonuclease, HsdR family insig. 33 99
o Cellulophaga baltica 18 M666_RS02045 type I restriction endonuclease subunit R cofit 35 94
o Bacteroides ovatus ATCC 8483 BACOVA_05330 type I site-specific deoxyribonuclease, HsdR family cofit 36 89
o Alteromonas macleodii MIT1002 MIT1002_03210 Type-1 restriction enzyme R protein insig. 35 85
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS03160 type I restriction endonuclease subunit R cofit 35 89
o Bacteroides thetaiotaomicron VPI-5482 BT4535 Type I restriction enzyme EcoR124II R protein (NCBI ptt file) cofit 36 86
  Alteromonas macleodii MIT1002 MIT1002_00593 Type I restriction enzyme EcoR124II R protein cofit 35 86
o Fusobacterium nucleatum SB010 HUW76_08985 type I restriction endonuclease subunit R strong 32 98
o Escherichia coli ECRC62 BNILDI_07600 hsdR Type I restriction enzyme EcoR124II endonuclease subunit insig. 32 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2633 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) no data 34 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15095 type I restriction endonuclease subunit R no data 34 86
  Herbaspirillum seropedicae SmR1 HSERO_RS22780 DEAD/DEAH box helicase insig. 31 72
  Shewanella sp. ANA-3 Shewana3_4164 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 33 60
  Rhodanobacter sp. FW510-T8 OKGIIK_06705 Type I restriction enzyme endonuclease subunit insig. 25 66
  Escherichia coli ECRC100 OKFHMN_05715 restriction endonuclease subunit R cofit 25 64
  Dickeya dianthicola ME23 DZA65_RS04740 HsdR family type I site-specific deoxyribonuclease insig. 26 64
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05380 HsdR family type I site-specific deoxyribonuclease insig. 24 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU1703 type I restriction-modification enzyme, R subunit (TIGR) insig. 25 61
  Castellaniella sp019104865 MT123 ABCV34_RS09190 type I restriction endonuclease subunit R insig. 26 62
  Alteromonas macleodii MIT1002 MIT1002_04087 Type-1 restriction enzyme R protein insig. 25 61
  Methanococcus maripaludis JJ MMJJ_RS02745 type I restriction endonuclease subunit R no data 27 59
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1523.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) strong 25 61
  Paraburkholderia graminis OAS925 ABIE53_000533 type I restriction enzyme R subunit insig. 25 61
  Azospirillum sp. SherDot2 MPMX19_00137 hypothetical protein cofit 26 63
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14280 DEAD/DEAH box helicase no data 26 58
  Pseudomonas segetis P6 ACVTMO_RS09885 type I restriction endonuclease subunit R insig. 25 66
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02139 type I restriction enzyme, R subunit insig. 24 61
  Rhodanobacter sp. FW510-T8 OKGIIK_13425 DEAD/DEAH box helicase insig. 23 61
  Sinorhizobium meliloti 1021 SMc02292 type I restriction enzyme R protein insig. 23 63
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08925 type I restriction endonuclease subunit R insig. 23 64
  Shewanella sp. ANA-3 Shewana3_3790 HsdR family type I site-specific deoxyribonuclease (RefSeq) cofit 23 64
  Escherichia coli ECOR38 HEPCGN_10720 type I restriction endonuclease insig. 24 61
  Escherichia coli Nissle 1917 ECOLIN_RS24950 HsdR family type I site-specific deoxyribonuclease insig. 24 61
  Escherichia fergusonii Becca EFB2_04103 hypothetical protein insig. 24 61
  Rhodanobacter sp. FW510-T8 OKGIIK_15915 Type I restriction enzyme endonuclease subunit insig. 25 63
  Klebsiella michiganensis M5al BWI76_RS03670 type I restriction-modification system subunit R insig. 24 71
  Bacteroides ovatus ATCC 8483 BACOVA_04167 type I site-specific deoxyribonuclease, HsdR family insig. 24 57
  Shewanella oneidensis MR-1 SO0380 hsdR-1 type I restriction-modification system, R subunit (NCBI ptt file) insig. 24 37
  Pseudomonas sp. DMC3 GFF4952 hypothetical protein insig. 24 60
  Shewanella sp. ANA-3 Shewana3_4244 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 25 36
  Dickeya dianthicola ME23 DZA65_RS03370 type I restriction endonuclease subunit R insig. 25 46
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06660 type I restriction-modification system endonuclease insig. 27 38
  Castellaniella sp019104865 MT123 ABCV34_RS11910 type I restriction endonuclease subunit R insig. 27 41
  Phaeobacter inhibens DSM 17395 PGA1_c30690 putative type I restriction-modification system, R subunit insig. 26 40
  Pseudomonas orientalis W4I3 QF045_RS26425 type I restriction endonuclease insig. 26 45
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10495 type I restriction endonuclease subunit R cofit 25 33
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08640 HsdR family type I site-specific deoxyribonuclease insig. 26 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_08855 type I restriction endonuclease subunit R insig. 24 58
  Rhodanobacter denitrificans MT42 LRK55_RS10135 type I restriction endonuclease subunit R cofit 24 33
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3936.1 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) insig. 24 58
  Cupriavidus basilensis FW507-4G11 RR42_RS18675 restriction endonuclease subunit R insig. 26 36
  Kangiella aquimarina DSM 16071 B158DRAFT_1641 type I site-specific deoxyribonuclease, HsdR family insig. 34 15
  Marinobacter adhaerens HP15 HP15_1582 type III restriction enzyme, res subunit insig. 23 37
  Synechocystis sp000284455 PCC 6803 SGL_RS01835 type I restriction endonuclease subunit R cofit 24 38
  Castellaniella sp019104865 MT123 ABCV34_RS11910 type I restriction endonuclease subunit R insig. 38 12
  Cellulophaga baltica 18 M666_RS14710 DEAD/DEAH box helicase family protein insig. 24 30
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07505 DEAD/DEAH box helicase family protein insig. 33 15
  Pseudomonas stutzeri RCH2 Psest_4044 type I site-specific deoxyribonuclease, HsdR family strong 26 34
  Pseudomonas stutzeri RCH2 Psest_4044 type I site-specific deoxyribonuclease, HsdR family strong 32 13
  Synechococcus elongatus PCC 7942 Synpcc7942_1065 DEAD/DEAH box helicase-like insig. 26 31
  Phocaeicola dorei CL03T12C01 ABI39_RS21435 DEAD/DEAH box helicase family protein insig. 31 15
  Bacteroides stercoris CC31F HMPREF1181_RS13645 DEAD/DEAH box helicase family protein insig. 33 14
  Rhodanobacter sp. FW510-T8 OKGIIK_08955 Type I restriction enzyme endonuclease subunit insig. 29 17
  Shewanella sp. ANA-3 Shewana3_4244 HsdR family type I site-specific deoxyribonuclease (RefSeq) insig. 30 12
  Bacteroides thetaiotaomicron VPI-5482 BT4517 Type I restriction enzyme EcoKI R protein (NCBI ptt file) insig. 33 15
  Rhodanobacter denitrificans MT42 LRK55_RS00325 type I restriction endonuclease strong 25 30
  Pseudomonas stutzeri RCH2 Psest_3407 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 23 61
  Pseudomonas stutzeri RCH2 Psest_0876 Type III restriction enzyme, res subunit./Type I restriction enzyme R protein N terminus (HSDR_N). insig. 22 61
  Phocaeicola dorei CL03T12C01 ABI39_RS01800 type I restriction endonuclease subunit R insig. 24 30
  Xanthobacter sp. DMC5 GFF2200 hypothetical protein insig. 44 7
  Kangiella aquimarina DSM 16071 B158DRAFT_1641 type I site-specific deoxyribonuclease, HsdR family insig. 23 36
  Acinetobacter radioresistens SK82 MPMX26_02867 hypothetical protein insig. 23 58
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06660 type I restriction-modification system endonuclease insig. 47 7
  Rhodanobacter sp. FW510-T8 OKGIIK_08955 Type I restriction enzyme endonuclease subunit insig. 39 8
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0384 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 31 17
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08640 HsdR family type I site-specific deoxyribonuclease insig. 42 7
  Caulobacter crescentus NA1000 CCNA_00659 type I restriction-modification system restriction subunit insig. 25 31
  Caulobacter crescentus NA1000 Δfur CCNA_00659 type I restriction-modification system restriction subunit cofit 25 31
  Synechocystis sp000284455 PCC 6803 SGL_RS01835 type I restriction endonuclease subunit R cofit 40 7
  Pseudomonas putida KT2440 PP_4740 Type I restriction enzyme EcoAI R protein insig. 25 21
  Escherichia coli ECOR38 HEPCGN_09450 hsdR DEAD/DEAH box helicase insig. 24 23
  Methylophilus sp. DMC18 GFF1952 hypothetical protein cofit 25 23
  Escherichia coli ECRC100 OKFHMN_11410 hsdR DEAD/DEAH box helicase insig. 25 22
  Escherichia coli ECRC101 MCAODC_01925 hsdR DEAD/DEAH box helicase insig. 25 22
  Escherichia coli ECRC102 NIAGMN_09260 hsdR DEAD/DEAH box helicase insig. 25 22
  Escherichia coli ECRC98 JDDGAC_15005 hsdR DEAD/DEAH box helicase insig. 25 22
  Escherichia coli ECRC99 KEDOAH_16735 hsdR DEAD/DEAH box helicase no data 25 22
  Shewanella oneidensis MR-1 SO0380 hsdR-1 type I restriction-modification system, R subunit (NCBI ptt file) insig. 38 7
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01075 DEAD/DEAH box helicase family protein insig. 25 23
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10495 type I restriction endonuclease subunit R cofit 35 9
  Rhodanobacter denitrificans MT42 LRK55_RS10135 type I restriction endonuclease subunit R cofit 35 9
  Rhodanobacter sp. FW510-T8 OKGIIK_13985 Restriction endonuclease insig. 25 23
  Enterobacter sp. TBS_079 MPMX20_03150 Putative DNA repair helicase RadD insig. 24 21
  Serratia liquefaciens MT49 IAI46_02405 DEAD/DEAH box helicase family protein insig. 24 22
  Klebsiella pneumoniae MKP103 KDGMDA_01860 type I restriction endonuclease subunit R cofit 23 35
  Phaeobacter inhibens DSM 17395 PGA1_c30690 putative type I restriction-modification system, R subunit insig. 29 10
  Dickeya dianthicola 67-19 HGI48_RS21705 DEAD/DEAH box helicase family protein insig. 30 17
  Pseudomonas stutzeri RCH2 Psest_1100 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases insig. 31 17