Homologs of Xcc-8004.1843.1 from Xanthomonas campestris pv. campestris strain 8004

Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase F

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1843.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 100 100
o Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 76 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS01375 pseudouridine synthase insig. 71 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16400 pseudouridine synthase cofit 70 86
o Rhodanobacter sp. FW510-T8 OKGIIK_16610 Pseudouridine synthase insig. 71 86
o Rhodanobacter denitrificans MT42 LRK55_RS06765 pseudouridine synthase insig. 69 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS07025 pseudouridine synthase insig. 69 86
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 56 85
  Marinobacter adhaerens HP15 HP15_886 pseudouridine synthase family 1 protein insig. 57 84
o Alteromonas macleodii MIT1002 MIT1002_01776 Ribosomal large subunit pseudouridine synthase F insig. 55 82
  Enterobacter asburiae PDN3 EX28DRAFT_4322 pseudouridine synthase insig. 55 85
  Klebsiella pneumoniae MKP103 KDGMDA_10215 23S rRNA pseudouridine(2604) synthase RluF insig. 55 85
  Enterobacter sp. TBS_079 MPMX20_00237 Dual-specificity RNA pseudouridine synthase RluF insig. 54 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19110 23S rRNA pseudouridine synthase F insig. 51 85
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1362 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) insig. 55 84
  Serratia liquefaciens MT49 IAI46_21130 23S rRNA pseudouridine(2604) synthase RluF insig. 55 84
  Escherichia coli ECOR38 HEPCGN_11820 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Escherichia coli ECRC100 OKFHMN_13190 rluF 23S rRNA pseudouridine(2604) synthase RluF cofit 54 85
  Escherichia coli ECRC101 MCAODC_03690 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Escherichia coli ECRC102 NIAGMN_10940 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Escherichia coli ECRC62 BNILDI_06155 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Escherichia coli ECRC98 JDDGAC_16815 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Escherichia coli ECRC99 KEDOAH_14970 rluF 23S rRNA pseudouridine(2604) synthase RluF no data 54 85
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04027 23S rRNA pseudouridine(2604) synthase insig. 54 85
  Escherichia coli ECOR27 NOLOHH_05365 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 54 85
  Klebsiella michiganensis M5al BWI76_RS01755 23S rRNA pseudouridine synthase F insig. 54 85
  Escherichia coli BL21 ECD_03894 23S rRNA pseudouridine(2604) synthase insig. 53 85
  Escherichia coli BW25113 b4022 yjbC 23S rRNA pseudouridine synthase (NCBI) sig. 53 85
  Escherichia fergusonii Becca EFB2_04580 Dual-specificity RNA pseudouridine synthase RluF insig. 53 85
  Escherichia coli Nissle 1917 ECOLIN_RS23225 23S rRNA pseudouridine(2604) synthase RluF insig. 53 85
o Cellulophaga baltica 18 M666_RS18620 23S rRNA pseudouridine(2604) synthase RluF insig. 50 83
  Erwinia amylovora T8 OLJFJH_05535 23S rRNA pseudouridine(2604) synthase RluF sig. 54 86
  Rahnella sp. WP5 EX31_RS06075 23S rRNA pseudouridine(2604) synthase RluF insig. 54 84
  Pantoea sp. MT58 IAI47_19435 23S rRNA pseudouridine(2604) synthase RluF insig. 53 84
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07735 23S rRNA pseudouridine(2604) synthase RluF cofit 53 84
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08325 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 52 84
  Erwinia tracheiphila SCR3 LU632_RS22175 rluF 23S rRNA pseudouridine(2604) synthase RluF insig. 52 84
  Serratia liquefaciens MT49 IAI46_19150 23S rRNA pseudouridine(2604) synthase RluF insig. 52 82
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08925 23S rRNA pseudouridine synthase F insig. 49 83
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1010 pseudouridine synthase insig. 48 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08930 hypothetical protein insig. 40 83
o Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 37 83
o Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 37 84
o Shewanella loihica PV-4 Shew_3180 pseudouridine synthase (RefSeq) insig. 37 83
o Shewanella amazonensis SB2B Sama_2937 pseudouridine synthase, Rsu (RefSeq) insig. 34 83
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 34 82
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 34 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11165 pseudouridine synthase no data 31 85
o Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 36 84
  Erwinia amylovora T8 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA insig. 36 82
  Phocaeicola dorei CL03T12C01 ABI39_RS08040 pseudouridine synthase no data 32 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00420 pseudouridine synthase no data 32 86
  Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 36 83
  Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 36 83
  Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Escherichia coli ECRC100 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 36 83
  Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 36 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 36 83
  Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 36 83
  Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 36 83
  Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 36 83
  Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 35 82
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00670 16S rRNA pseudouridine(516) synthase RsuA cofit 34 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 36 82
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 32 82
  Variovorax sp. OAS795 ABID97_RS00980 pseudouridine synthase strong 32 85
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 34 83
  Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 35 82
  Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 33 84
  Paraburkholderia graminis OAS925 ABIE53_002509 23S rRNA pseudouridine2604 synthase insig. 32 92
  Bacteroides stercoris CC31F HMPREF1181_RS07005 pseudouridine synthase no data 30 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25065 pseudouridylate synthase no data 35 82
  Burkholderia phytofirmans PsJN BPHYT_RS12155 RNA-binding protein S4 insig. 33 82
  Acidovorax sp. GW101-3H11 Ac3H11_4641 tRNA pseudouridine synthase A (EC 4.2.1.70) sig. 31 82
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 35 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17510 pseudouridylate synthase strong 35 83
  Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 33 84
  Bacteroides thetaiotaomicron VPI-5482 BT3872 ribosomal large subunit pseudouridine synthase B (NCBI ptt file) no data 30 85
  Dechlorosoma suillum PS Dsui_2759 pseudouridine synthase family protein insig. 32 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18660 pseudouridine synthase no data 34 82
  Variovorax sp. SCN45 GFF3530 Pseudouridine synthase insig. 32 83
  Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 32 83
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 32 82
  Methylophilus sp. DMC18 GFF2067 hypothetical protein insig. 32 82
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 35 90
  Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 32 83
  Kangiella aquimarina DSM 16071 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) strong 31 84
  Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 34 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16035 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 32 83
  Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 31 83
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 34 83
  Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 32 83
  Klebsiella pneumoniae MKP103 KDGMDA_26750 16S rRNA pseudouridine(516) synthase RsuA insig. 34 82
  Shewanella amazonensis SB2B Sama_2785 pseudouridine synthase, Rsu (RefSeq) insig. 30 82
  Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 28 81
  Herbaspirillum seropedicae SmR1 HSERO_RS08590 pseudouridine synthase insig. 30 83