| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33910 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS12175 | | LysR family transcriptional regulator | insig. | 86 | 100 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS00200 | | LysR family transcriptional regulator | insig. | 48 | 99 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1447 | | LysR family regulatory protein CidR | insig. | 47 | 98 |
| o | Enterobacter sp. TBS_079 | MPMX20_00286 | | Hydrogen peroxide-inducible genes activator | insig. | 48 | 98 |
| o | Klebsiella michiganensis M5al | BWI76_RS02045 | | LysR family transcriptional regulator | sig. | 46 | 97 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21070 | | LysR family transcriptional regulator | insig. | 45 | 98 |
| o | Pantoea sp. MT58 | IAI47_17745 | | LysR family transcriptional regulator | insig. | 45 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS18725 | | LysR family transcriptional regulator | insig. | 46 | 99 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4237 | | Transcriptional regulator | insig. | 47 | 98 |
| | Erwinia amylovora T8 | OLJFJH_03365 | | LysR family transcriptional regulator | insig. | 45 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000065 | | DNA-binding transcriptional LysR family regulator | insig. | 45 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05796 | | transcriptional regulator, LysR family | insig. | 45 | 99 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_10515 | | LysR family transcriptional regulator | insig. | 44 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS28745 | | LysR family transcriptional regulator | cofit | 45 | 99 |
| | Escherichia fergusonii Becca | EFB2_04525 | | Hydrogen peroxide-inducible genes activator | insig. | 46 | 98 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23525 | | LysR family transcriptional regulator | insig. | 46 | 98 |
| | Rahnella sp. WP5 | EX31_RS12125 | | LysR family transcriptional regulator | insig. | 44 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27560 | | transcriptional regulator | insig. | 45 | 99 |
| | Serratia liquefaciens MT49 | IAI46_22830 | | LysR family transcriptional regulator | insig. | 45 | 98 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10505 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS09910 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| | Xanthobacter sp. DMC5 | GFF698 | | HTH-type transcriptional regulator CynR | no data | 39 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_17625 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Shewanella loihica PV-4 | Shew_3562 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 99 |
| | Shewanella sp. ANA-3 | Shewana3_3435 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 99 |
| | Shewanella oneidensis MR-1 | SO0843 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 34 | 99 |
| | Pseudomonas sp. SVBP6 | COO64_RS03600 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Pseudomonas putida KT2440 | PP_4627 | | transcriptional regulator, LysR family | sig. | 36 | 99 |
| | Pseudomonas sp. BP01 | JOY50_RS15585 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0909 | | transcriptional regulator, LysR family | insig. | 35 | 98 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0909 | | transcriptional regulator, LysR family | insig. | 35 | 98 |
| | Pseudomonas simiae WCS417 | PS417_23460 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04052 | | HTH-type transcriptional regulator CynR | cofit | 34 | 99 |
| | Acinetobacter radioresistens SK82 | MPMX26_01607 | | HTH-type transcriptional regulator GltC | no data | 32 | 98 |
| | Sphingobium sp. HT1-2 | GFF3394 | | Transcriptional regulator CidR, LysR family | cofit | 34 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21120 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21120 | | LysR family transcriptional regulator | strong | 34 | 98 |
| | Pseudomonas simiae WCS417 | PS417_19125 | | LysR family transcriptional regulator | sig. | 34 | 98 |
| | Shewanella amazonensis SB2B | Sama_0586 | | LysR family transcriptional regulator (RefSeq) | strong | 34 | 98 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11345 | | LysR family transcriptional regulator | insig. | 32 | 98 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2111 | | transcriptional regulator, LysR family (TIGR) | insig. | 34 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_15120 | | hypothetical protein | insig. | 33 | 97 |
| | Shewanella oneidensis MR-1 | SO1046 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 31 | 99 |
| | Shewanella sp. ANA-3 | Shewana3_0884 | | LysR family transcriptional regulator (RefSeq) | cofit | 31 | 99 |
| | Shewanella loihica PV-4 | Shew_0828 | | LysR family transcriptional regulator (RefSeq) | insig. | 30 | 98 |
| | Shewanella amazonensis SB2B | Sama_2928 | | LysR family transcriptional regulator (RefSeq) | strong | 31 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF11 | | Transcriptional regulator, lysR family | no data | 28 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_006109 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 99 |
| | Escherichia coli BL21 | ECD_00292 | | transcriptional activator of cyn operon; autorepressor | insig. | 30 | 83 |
| | Escherichia coli BW25113 | b0338 | cynR | DNA-binding transcriptional dual regulator (NCBI) | insig. | 30 | 83 |
| | Escherichia coli ECOR38 | HEPCGN_07455 | cynR | transcriptional regulator CynR | insig. | 30 | 83 |
| | Escherichia coli ECRC62 | BNILDI_23155 | cynR | transcriptional regulator CynR | insig. | 28 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03333 | | HTH-type transcriptional regulator CynR | insig. | 28 | 97 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_25745 | | nitrogen assimilation transcriptional regulator NAC | insig. | 29 | 96 |
| | Dickeya dianthicola 67-19 | HGI48_RS03375 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Escherichia coli ECOR27 | NOLOHH_01740 | cynR | transcriptional regulator CynR | insig. | 28 | 83 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF785 | | Transcriptional regulator ligR, LysR family | insig. | 29 | 80 |
| | Enterobacter sp. TBS_079 | MPMX20_02983 | | HTH-type transcriptional regulator ArgP | strong | 29 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21345 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21345 | | LysR family transcriptional regulator | sig. | 28 | 99 |
| | Dickeya dianthicola ME23 | DZA65_RS03420 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Klebsiella michiganensis M5al | BWI76_RS18630 | | nitrogen assimilation transcriptional regulator | strong | 28 | 96 |
| | Variovorax sp. SCN45 | GFF3056 | | Nitrogen assimilation regulatory protein Nac | insig. | 32 | 81 |
| | Escherichia coli ECRC100 | OKFHMN_08840 | cynR | transcriptional regulator CynR | insig. | 30 | 83 |
| | Escherichia coli ECRC101 | MCAODC_28070 | cynR | transcriptional regulator CynR | insig. | 30 | 83 |
| | Escherichia coli ECRC102 | NIAGMN_06895 | cynR | transcriptional regulator CynR | insig. | 30 | 83 |
| | Escherichia coli ECRC98 | JDDGAC_12495 | cynR | transcriptional regulator CynR | insig. | 30 | 83 |
| | Escherichia coli ECRC99 | KEDOAH_19125 | cynR | transcriptional regulator CynR | no data | 30 | 83 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0565 | | Transcriptional regulator | insig. | 29 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS03225 | | LysR family transcriptional regulator | insig. | 28 | 82 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04260 | | LysR family transcriptional regulator | insig. | 28 | 92 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4759 | | Transcriptional regulators, LysR family | insig. | 29 | 81 |
| | Pseudomonas sp. BP01 | JOY50_RS12935 | cynR | transcriptional regulator CynR | insig. | 26 | 97 |
| | Rahnella sp. WP5 | EX31_RS04240 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3030 | | Transcriptional regulators, LysR family | insig. | 29 | 80 |
| | Pseudomonas simiae WCS417 | PS417_05950 | | LysR family transcriptional regulator | insig. | 28 | 81 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0277 | | Transcriptional regulator | strong | 27 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3125 | | Transcriptional regulators, LysR family | insig. | 28 | 80 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06285 | | LysR family transcriptional regulator | insig. | 28 | 80 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04078 | | HTH-type transcriptional regulator CynR | cofit | 28 | 99 |
| | Variovorax sp. OAS795 | ABID97_RS27365 | | nitrogen assimilation transcriptional regulator NAC | insig. | 30 | 99 |
| | Rhodopseudomonas palustris CGA009 | TX73_002855 | | LysR family transcriptional regulator | insig. | 33 | 81 |
| | Erwinia amylovora T8 | OLJFJH_05375 | | transcriptional regulator | insig. | 28 | 82 |
| | Pseudomonas sp. RS175 | PFR28_00349 | | HTH-type transcriptional regulator GltC | insig. | 28 | 80 |
| | Pantoea sp. MT58 | IAI47_07570 | | nitrogen assimilation transcriptional regulator NAC | sig. | 29 | 81 |
| | Pseudomonas simiae WCS417 | PS417_19375 | | LysR family transcriptional regulator | insig. | 28 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37760 | | transcriptional regulator CynR | insig. | 28 | 80 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01359 | | HTH-type transcriptional regulator GltC | cofit | 28 | 81 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS01465 | | nitrogen assimilation transcriptional regulator | cofit | 29 | 81 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 30 | 81 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06010 | | LysR family transcriptional regulator | insig. | 28 | 81 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06010 | | LysR family transcriptional regulator | sig. | 28 | 81 |
| | Serratia liquefaciens MT49 | IAI46_07810 | | transcriptional regulator CynR | insig. | 27 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | cofit | 27 | 93 |
| | Dickeya dianthicola 67-19 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | strong | 27 | 93 |
| | Dickeya dianthicola ME23 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | strong | 27 | 93 |
| | Variovorax sp. SCN45 | GFF881 | | Transcriptional regulator ligR, LysR family | insig. | 27 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS12705 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12705 | | LysR family transcriptional regulator | insig. | 27 | 96 |