Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Cupriavidus basilensis FW507-4G11 | RR42_RS05700 | | hypothetical protein | insig. | 100 | 100 |
| Dechlorosoma suillum PS | Dsui_2833 | | putative transcriptional regulator | insig. | 60 | 56 |
| Shewanella sp. ANA-3 | Shewana3_3803 | | XRE family transcriptional regulator (RefSeq) | cofit | 56 | 51 |
| Shewanella loihica PV-4 | Shew_3490 | | XRE family transcriptional regulator (RefSeq) | insig. | 55 | 50 |
| Ralstonia solanacearum PSI07 | RPSI07_RS25065 | | XRE family transcriptional regulator | insig. | 50 | 50 |
| Ralstonia solanacearum GMI1000 | RS_RS11670 | | XRE family transcriptional regulator | insig. | 41 | 49 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4306 | | Predicted transcriptional regulators | insig. | 46 | 56 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11685 | | transcription factor | no data | 40 | 52 |
| Dickeya dadantii 3937 | DDA3937_RS08405 | | helix-turn-helix transcriptional regulator | no data | 44 | 49 |
| Dickeya dadantii 3937 | DDA3937_RS04070 | | helix-turn-helix transcriptional regulator | strong | 43 | 52 |
| Variovorax sp. OAS795 | ABID97_RS23605 | | helix-turn-helix transcriptional regulator | insig. | 43 | 53 |
| Ralstonia solanacearum GMI1000 | RS_RS05775 | | XRE family transcriptional regulator | insig. | 43 | 50 |
| Xanthobacter sp. DMC5 | GFF2607 | | hypothetical protein | insig. | 40 | 50 |
| Dickeya dianthicola 67-19 | HGI48_RS08545 | | helix-turn-helix transcriptional regulator | insig. | 42 | 52 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0794 | | transcriptional regulator, XRE family (RefSeq) | strong | 35 | 53 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS00085 | | transcriptional regulator | insig. | 38 | 49 |
| Burkholderia phytofirmans PsJN | BPHYT_RS35975 | | Xre family transcriptional regulator | insig. | 47 | 47 |
| Ralstonia solanacearum PSI07 | RPSI07_RS18415 | | XRE family transcriptional regulator | insig. | 42 | 50 |
| Dickeya dadantii 3937 | DDA3937_RS21910 | | helix-turn-helix transcriptional regulator | insig. | 42 | 50 |
| Dickeya dianthicola 67-19 | HGI48_RS08550 | | helix-turn-helix transcriptional regulator | insig. | 42 | 50 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS25810 | | DNA-binding protein | insig. | 35 | 53 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14960 | | XRE family transcriptional regulator | insig. | 42 | 51 |
| Ralstonia solanacearum UW163 | UW163_RS12430 | | XRE family transcriptional regulator | no data | 42 | 51 |
| Variovorax sp. OAS795 | ABID97_RS13245 | | XRE family transcriptional regulator | insig. | 45 | 45 |
| Sinorhizobium meliloti 1021 | SMc02184 | | transcriptional regulator | insig. | 42 | 51 |
| Variovorax sp. OAS795 | ABID97_RS07740 | | helix-turn-helix transcriptional regulator | insig. | 44 | 40 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS07155 | | helix-turn-helix transcriptional regulator | insig. | 34 | 60 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20215 | | transcriptional regulator | insig. | 40 | 48 |
| Pseudomonas sp. S08-1 | OH686_23020 | | Transcriptional regulator, Xre family | insig. | 39 | 51 |
| Escherichia coli ECRC100 | OKFHMN_11715 | hipB | Transcriptional regulator, contains XRE-family HTH domain | cofit | 48 | 48 |
| Escherichia coli ECRC101 | MCAODC_02230 | hipB | Transcriptional regulator, contains XRE-family HTH domain | insig. | 48 | 48 |
| Escherichia coli ECRC102 | NIAGMN_09565 | hipB | Transcriptional regulator, contains XRE-family HTH domain | insig. | 48 | 48 |
| Escherichia coli ECRC99 | KEDOAH_16430 | hipB | Transcriptional regulator, contains XRE-family HTH domain | no data | 48 | 48 |
| Escherichia coli Nissle 1917 | ECOLIN_RS26340 | | helix-turn-helix transcriptional regulator | cofit | 48 | 47 |
| Variovorax sp. SCN45 | GFF1264 | | Transcriptional regulator, Xre family | insig. | 44 | 43 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_00255 | | DNA-binding protein | insig. | 38 | 48 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS29790 | | hypothetical protein | insig. | 36 | 50 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10855 | | helix-turn-helix domain-containing protein | insig. | 39 | 52 |
| Rhodanobacter denitrificans MT42 | LRK55_RS10465 | | helix-turn-helix transcriptional regulator | cofit | 40 | 44 |
| Shewanella oneidensis MR-1 | SOA0002 | | type II restriction-modification system activator, putative (NCBI ptt file) | strong | 40 | 53 |
| Variovorax sp. SCN45 | GFF3233 | | hypothetical protein | no data | 39 | 51 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21935 | | helix-turn-helix domain-containing protein | sig. | 37 | 48 |
| Pseudomonas simiae WCS417 | PS417_24885 | | transcriptional regulator | strong | 40 | 49 |
| Magnetospirillum magneticum AMB-1 | AMB_RS02475 | | XRE family transcriptional regulator | insig. | 43 | 47 |
| Pantoea sp. MT58 | IAI47_13305 | | helix-turn-helix transcriptional regulator | cofit | 38 | 53 |
| Pantoea sp. MT58 | IAI47_20745 | | helix-turn-helix transcriptional regulator | sig. | 33 | 53 |
| Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14340 | | helix-turn-helix transcriptional regulator | insig. | 33 | 53 |
| Pseudomonas fluorescens SBW25 | PFLU_RS09495 | | helix-turn-helix transcriptional regulator | insig. | 36 | 48 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS09495 | | helix-turn-helix transcriptional regulator | insig. | 36 | 48 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_919 | | FIG00954373: hypothetical protein | insig. | 36 | 48 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS34765 | | helix-turn-helix transcriptional regulator | insig. | 40 | 43 |
| Ralstonia solanacearum PSI07 | RPSI07_RS22035 | | XRE family transcriptional regulator | insig. | 38 | 44 |
| Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS04015 | | helix-turn-helix transcriptional regulator | cofit | 38 | 53 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS01775 | | helix-turn-helix transcriptional regulator | no data | 30 | 49 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5451 | | hypothetical protein | insig. | 38 | 49 |
| Pseudomonas lactucae CFBP13502 | GEMAOFIL_03889 | | HTH-type transcriptional regulator SutR | cofit | 37 | 69 |
| Castellaniella sp019104865 MT123 | ABCV34_RS15905 | | helix-turn-helix transcriptional regulator | no data | 35 | 55 |
| Serratia liquefaciens MT49 | IAI46_09015 | | helix-turn-helix transcriptional regulator | no data | 34 | 85 |
| Variovorax sp. SCN45 | GFF4219 | | Transcriptional regulator, MerR family | no data | 48 | 34 |
| Ralstonia solanacearum PSI07 | RPSI07_RS18795 | | XRE family transcriptional regulator | insig. | 37 | 47 |
| Shewanella sp. ANA-3 | Shewana3_0319 | | XRE family transcriptional regulator (RefSeq) | strong | 31 | 50 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06745 | | DNA-binding protein | sig. | 31 | 68 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3201 | | Transcriptional regulator, MerR family | strong | 31 | 68 |
| Variovorax sp. OAS795 | ABID97_RS19385 | | short-chain fatty acyl-CoA regulator family protein | strong | 43 | 42 |
| Ralstonia solanacearum GMI1000 | RS_RS05450 | | XRE family transcriptional regulator | strong | 37 | 47 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_2607 | | transcriptional regulator, XRE family with cupin sensor | sig. | 34 | 55 |
| Acinetobacter baumannii LAC-4 | RR41_RS01325 | | XRE family transcriptional regulator | insig. | 38 | 45 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14665 | | XRE family transcriptional regulator | strong | 37 | 47 |
| Ralstonia solanacearum UW163 | UW163_RS12135 | | XRE family transcriptional regulator | insig. | 37 | 47 |
| Pseudomonas stutzeri RCH2 | Psest_3419 | | Predicted transcriptional regulators | strong | 46 | 43 |
| Ralstonia solanacearum UW163 | UW163_RS05495 | | XRE family transcriptional regulator | insig. | 40 | 53 |
| Ralstonia solanacearum UW163 | UW163_RS16180 | | XRE family transcriptional regulator | no data | 40 | 53 |
| Caulobacter crescentus NA1000 | CCNA_02789 | | Xre-family transcriptional regulator | insig. | 38 | 50 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02789 | | Xre-family transcriptional regulator | cofit | 38 | 50 |
| Dickeya dadantii 3937 | DDA3937_RS13775 | | helix-turn-helix transcriptional regulator | insig. | 42 | 44 |
| Dickeya dianthicola ME23 | DZA65_RS07685 | | helix-turn-helix transcriptional regulator | insig. | 42 | 44 |
| Pectobacterium carotovorum WPP14 | HER17_RS03720 | | XRE family transcriptional regulator | insig. | 37 | 54 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS07920 | | XRE family transcriptional regulator | cofit | 36 | 54 |
| Ralstonia solanacearum UW163 | UW163_RS05705 | | XRE family transcriptional regulator | sig. | 36 | 54 |
| Pseudomonas sp. BP01 | JOY50_RS12560 | | helix-turn-helix domain-containing protein | insig. | 37 | 59 |
| Serratia liquefaciens MT49 | IAI46_07410 | | helix-turn-helix transcriptional regulator | insig. | 43 | 40 |
| Alteromonas macleodii MIT1002 | MIT1002_02112 | | anaerobic benzoate catabolism transcriptional regulator | insig. | 42 | 40 |
| Caulobacter crescentus NA1000 | CCNA_02788 | | Xre-family transcriptional regulator | insig. | 40 | 47 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02788 | | Xre-family transcriptional regulator | cofit | 40 | 47 |
| Castellaniella sp019104865 MT123 | ABCV34_RS09100 | | XRE family transcriptional regulator | cofit | 39 | 50 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09265 | | XRE family transcriptional regulator | insig. | 39 | 42 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3490 | | Predicted transcriptional regulators | no data | 37 | 53 |
| Pseudomonas putida KT2440 | PP_2232 | | XRE family transcriptional regulator | sig. | 33 | 72 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS33370 | | XRE family transcriptional regulator | insig. | 32 | 53 |
| Erwinia tracheiphila HP pepo 2.2 | IJEDHG_08380 | | DNA-binding protein | cofit | 42 | 46 |
| Erwinia tracheiphila SCR3 | LU632_RS22230 | | helix-turn-helix domain-containing protein | cofit | 42 | 46 |
| Pseudomonas aeruginosa PA14 | IKLFDK_24455 | | DNA-binding protein | cofit | 40 | 53 |
| Pseudomonas putida KT2440 | PP_3125 | | putative transcriptional regulator (Cro/CI family) | no data | 40 | 53 |
| Ralstonia solanacearum PSI07 | RPSI07_RS09355 | | XRE family transcriptional regulator | sig. | 39 | 57 |
| Pseudomonas aeruginosa PA14 | IKLFDK_12720 | | transcriptional regulator | insig. | 39 | 52 |
| Shewanella oneidensis MR-1 | SO3867 | | transcriptional regulator, Cro/CI family (NCBI ptt file) | insig. | 37 | 47 |
| Pseudomonas sp. SVBP6 | COO64_RS06485 | | helix-turn-helix transcriptional regulator | no data | 35 | 43 |
| Rahnella sp. WP5 | EX31_RS05710 | | helix-turn-helix transcriptional regulator | insig. | 32 | 53 |
| Pseudomonas sp. DMC3 | GFF1048 | | HTH-type transcriptional regulator SutR | no data | 30 | 47 |
| Serratia liquefaciens MT49 | IAI46_11440 | | helix-turn-helix transcriptional regulator | insig. | 32 | 65 |