Homologs of RR42_RS01120 from Cupriavidus basilensis FW507-4G11

RNA polymerase sigma factor
SEED: sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Cupriavidus basilensis FW507-4G11 RR42_RS01120 RNA polymerase sigma factor strong 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS23780 RNA polymerase sigma factor insig. 71 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS05165 sigma-70 family RNA polymerase sigma factor insig. 70 99
o Ralstonia solanacearum GMI1000 RS_RS00170 RNA polymerase sigma factor insig. 70 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09585 RNA polymerase sigma factor insig. 70 99
o Ralstonia solanacearum UW163 UW163_RS03995 RNA polymerase sigma factor insig. 70 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03600 RNA polymerase sigma-70 factor, ECF subfamily insig. 48 93
o Burkholderia phytofirmans PsJN BPHYT_RS34725 RNA polymerase sigma factor no data 47 93
o Methylophilus sp. DMC18 GFF1725 ECF RNA polymerase sigma factor SigM insig. 49 91
o Paraburkholderia graminis OAS925 ABIE53_004659 RNA polymerase sigma-70 factor (TIGR02943 family) insig. 48 92
o Cellulophaga baltica 18 M666_RS01545 sigma-70 family RNA polymerase sigma factor insig. 34 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12595 RNA polymerase subunit sigma-24 insig. 36 97
  Kangiella aquimarina DSM 16071 B158DRAFT_0596 RNA polymerase sigma factor, sigma-70 family insig. 32 82
  Pseudomonas sp. S08-1 OH686_05515 RNA polymerase sigma factor RpoE cofit 31 81
  Pseudomonas segetis P6 MPMX49_03262 ECF RNA polymerase sigma-E factor sig. 31 81
  Pseudomonas aeruginosa PA14 IKLFDK_16830 RNA polymerase subunit sigma-24 insig. 34 81
  Paraburkholderia graminis OAS925 ABIE53_005146 RNA polymerase sigma factor (sigma-70 family) sig. 33 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01538 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 88
  Pseudomonas sp. SVBP6 COO64_RS21990 RNA polymerase sigma factor insig. 32 81
  Pseudomonas fluorescens FW300-N2E3 AO353_18235 RNA polymerase subunit sigma-24 insig. 31 81
  Pseudomonas sp. RS175 PFR28_00741 ECF RNA polymerase sigma-E factor insig. 29 81
  Sinorhizobium meliloti 1021 SM_b20592 RNA polymerase sigma factor insig. 28 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS18240 RNA polymerase sigma factor insig. 28 91
  Pseudomonas fluorescens FW300-N2C3 AO356_04270 RNA polymerase subunit sigma-24 insig. 28 81
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04263 ECF RNA polymerase sigma-E factor insig. 27 88
  Pseudomonas sp. DMC3 GFF2343 ECF RNA polymerase sigma-E factor insig. 28 88
  Marinobacter adhaerens HP15 HP15_3848 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 26 89
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2692 RNA polymerase sigma factor RpoE sig. 28 81
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3390 RNA polymerase sigma factor RpoE insig. 29 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2047 RNA polymerase sigma factor, sigma-70 family strong 27 83
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 28 91
  Pseudomonas simiae WCS417 PS417_20565 RNA polymerase subunit sigma-24 insig. 27 83
  Pseudomonas fluorescens SBW25 PFLU_RS22255 RNA polymerase sigma factor cofit 27 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22255 RNA polymerase sigma factor insig. 27 88
o Phocaeicola dorei CL03T12C01 ABI39_RS09110 RNA polymerase sigma-70 factor insig. 25 90
  Acidovorax sp. GW101-3H11 Ac3H11_916 RNA polymerase sigma-70 factor insig. 24 88
  Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 31 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 29 87
  Rhodopseudomonas palustris CGA009 TX73_024905 sigma-70 family RNA polymerase sigma factor insig. 27 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 90
  Rhodanobacter denitrificans MT42 LRK55_RS07625 RNA polymerase sigma factor insig. 29 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07895 RNA polymerase sigma factor insig. 29 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00665 RNA polymerase subunit sigma-24 strong 28 80
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 26 89
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 28 92
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 37 36
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08220 RNA polymerase sigma-70 factor insig. 23 92
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 33 65
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 26 89
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 26 89
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 26 89
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 26 89
  Bacteroides stercoris CC31F HMPREF1181_RS01060 RNA polymerase sigma-70 factor insig. 25 90
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 24 89
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 27 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00650 RNA polymerase sigma factor insig. 28 78
  Pseudomonas syringae pv. syringae B728a Psyr_0362 Sigma-70 region 2 insig. 27 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0362 Sigma-70 region 2 insig. 27 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 27 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 26 80
  Castellaniella sp019104865 MT123 ABCV34_RS07155 RNA polymerase sigma factor insig. 25 88
  Phocaeicola dorei CL03T12C01 ABI39_RS02605 RNA polymerase sigma-70 factor insig. 25 89
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 28 76
  Magnetospirillum magneticum AMB-1 AMB_RS09285 RNA polymerase sigma factor no data 28 90
  Rhodanobacter sp. FW510-T8 OKGIIK_14380 RNA polymerase sigma factor insig. 28 78
  Marinobacter adhaerens HP15 HP15_1654 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 23 89
  Pseudomonas segetis P6 MPMX49_01400 RNA polymerase sigma-H factor strong 27 81
  Marinobacter adhaerens HP15 HP15_3537 protein containing RNA polymerase sigma-70 domain sig. 26 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11515 RNA polymerase sigma-70 factor insig. 25 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 25 91
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16705 RNA polymerase sigma factor strong 26 85
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS20645 RNA polymerase subunit sigma-70 insig. 25 91
  Rhodopseudomonas palustris CGA009 TX73_009355 sigma-70 family RNA polymerase sigma factor insig. 22 89
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11925 RNA polymerase sigma-70 factor strong 25 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 32 65
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 27 80
  Variovorax sp. OAS795 ABID97_RS28845 RNA polymerase sigma factor insig. 25 88
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 41 34
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 38 38
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15190 RNA polymerase sigma-70 factor insig. 25 88
  Rhizobium sp. OAE497 ABIE40_RS21790 sigma-70 family RNA polymerase sigma factor cofit 35 39
  Bacteroides ovatus ATCC 8483 BACOVA_01977 RNA polymerase sigma-70 factor cofit 25 87
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 24 90
  Erwinia amylovora T8 OLJFJH_08545 RNA polymerase subunit sigma-70 insig. 24 91
  Rhodanobacter sp. FW510-T8 OKGIIK_10685 rpoE RNA polymerase sigma factor cofit 27 90
  Alteromonas macleodii MIT1002 MIT1002_01278 RNA polymerase sigma factor SigV insig. 24 92
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 23 89
  Bacteroides stercoris CC31F HMPREF1181_RS00820 RNA polymerase sigma-70 factor insig. 23 87
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 32 36
  Herbaspirillum seropedicae SmR1 HSERO_RS09625 RNA polymerase sigma factor RpoE no data 26 89
  Kangiella aquimarina DSM 16071 B158DRAFT_2180 RNA polymerase, sigma-24 subunit, RpoE strong 26 86
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07030 RNA polymerase sigma-70 factor insig. 25 88
  Dinoroseobacter shibae DFL-12 Dshi_3423 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 23 91
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 29 94
  Lysobacter sp. OAE881 ABIE51_RS05545 RNA polymerase sigma factor insig. 29 92
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19220 sigma-70 family RNA polymerase sigma factor insig. 27 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3517 RNA polymerase sigma-70 factor insig. 27 88
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06675 RNA polymerase sigma-70 factor insig. 26 90
  Phocaeicola dorei CL03T12C01 ABI39_RS10300 RNA polymerase sigma-70 factor sig. 25 80
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 25 96