Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1372 | | sigma-54 dependent transcriptional regulator | insig. | 100 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_27970 | | Fis family transcriptional regulator | insig. | 96 | 100 |
o | Pseudomonas syringae pv. syringae B728a | Psyr_2735 | | Helix-turn-helix, Fis-type | insig. | 80 | 99 |
o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2735 | | Helix-turn-helix, Fis-type | insig. | 80 | 99 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS16115 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 82 | 99 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16115 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 82 | 99 |
o | Ralstonia solanacearum GMI1000 | RS_RS18250 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 96 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS00800 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 55 | 96 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS22915 | | Fis family transcriptional regulator | insig. | 56 | 95 |
o | Pseudomonas sp. RS175 | PFR28_01986 | | Phenol regulator MopR | insig. | 55 | 96 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS22395 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 96 |
o | Ralstonia solanacearum UW163 | UW163_RS22940 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 56 | 96 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS32695 | | Fis family transcriptional regulator | insig. | 47 | 94 |
o | Marinobacter adhaerens HP15 | HP15_4023 | | helix-turn-helix, Fis-type | insig. | 44 | 93 |
o | Alteromonas macleodii MIT1002 | MIT1002_02086 | | Nif-specific regulatory protein | insig. | 43 | 95 |
o | Acinetobacter radioresistens SK82 | MPMX26_00910 | | Phenol regulator MopR | insig. | 40 | 92 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2934 | ntrX | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 46 | 56 |
| Rhodospirillum rubrum S1H | Rru_A1388 | | Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) | cofit | 44 | 56 |
| Rhodopseudomonas palustris CGA009 | TX73_007055 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 42 | 56 |
| Rhodopseudomonas palustris CGA009 | TX73_007390 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 44 | 56 |
| Azospirillum brasilense Sp245 | AZOBR_RS29300 | | Fis family transcriptional regulator | insig. | 43 | 56 |
| Shewanella oneidensis MR-1 | SO3660 | | sigma-54 dependent transcriptional regulator/sensory box protein (NCBI ptt file) | insig. | 42 | 61 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1324 | | sigma54 specific transcriptional regulator, Fis family (RefSeq) | strong | 45 | 56 |
| Shewanella amazonensis SB2B | Sama_1549 | | response regulator receiver protein (RefSeq) | insig. | 45 | 56 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 46 | 53 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 46 | 53 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | cofit | 46 | 53 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | cofit | 46 | 53 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 46 | 53 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 46 | 53 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 45 | 60 |
| Pseudomonas stutzeri RCH2 | Psest_1765 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 45 | 57 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 45 | 56 |
| Shewanella sp. ANA-3 | Shewana3_3227 | | Fis family transcriptional regulator (RefSeq) | insig. | 48 | 49 |
| Shewanella amazonensis SB2B | Sama_2834 | | sigma-54 dependent transcriptional regulator/sensory box protein (RefSeq) | insig. | 53 | 41 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS14390 | | ATPase AAA | strong | 46 | 54 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2800.1 | | Flagellar regulatory protein FleQ | sig. | 45 | 56 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2894 | flrA | sigma-54 dependent transcriptional regulator (TIGR) | strong | 46 | 56 |
| Pseudomonas simiae WCS417 | PS417_19825 | | ATPase AAA | strong | 45 | 57 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 45 | 56 |
| Pseudomonas fluorescens SBW25 | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 57 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS21795 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 57 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3599 | | Flagellar regulatory protein FleQ | insig. | 46 | 57 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_18660 | | AAA family ATPase | strong | 45 | 57 |
| Shewanella oneidensis MR-1 | SO3232 | flrA | flagellar regulatory protein A (NCBI ptt file) | strong | 44 | 56 |
| Shewanella sp. ANA-3 | Shewana3_1338 | | sigma-54 dependent trancsriptional regulator (RefSeq) | strong | 44 | 56 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4357 | | Flagellar regulatory protein FleQ | insig. | 45 | 57 |
| Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 46 | 56 |
| Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 45 | 56 |
| Pseudomonas sp. RS175 | PFR28_01679 | | Regulatory protein AtoC | sig. | 43 | 58 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 43 | 58 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 46 | 56 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 46 | 56 |
| Pseudomonas sp. S08-1 | OH686_02855 | | Flagellar regulatory protein FleQ | cofit | 44 | 57 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_10670 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 42 | 56 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01235 | | DNA-binding transcriptional activator HyfR | insig. | 48 | 48 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 47 | 48 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS20155 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 56 |
| Pseudomonas sp. RS175 | PFR28_00828 | | Anaerobic nitric oxide reductase transcription regulator NorR | strong | 45 | 57 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_03855 | | AAA family ATPase | strong | 45 | 57 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2597 | | Flagellar regulatory protein FleQ | strong | 45 | 57 |
| Shewanella amazonensis SB2B | Sama_2301 | | response regulator receiver protein (RefSeq) | strong | 44 | 56 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3461 | | Helix-turn-helix, Fis-type | strong | 44 | 57 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3461 | | Helix-turn-helix, Fis-type | cofit | 44 | 57 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 43 | 56 |
| Caulobacter crescentus NA1000 | CCNA_03424 | | AAA-family response regulator tacA | strong | 42 | 56 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03424 | | AAA-family response regulator tacA | cofit | 42 | 56 |
| Escherichia coli ECRC62 | BNILDI_12310 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 47 | 48 |
| Pseudomonas putida KT2440 | PP_4373 | | Transcriptional regulator FleQ | strong | 44 | 57 |
| Dickeya dianthicola 67-19 | HGI48_RS18785 | | nif-specific transcriptional activator NifA | insig. | 43 | 61 |
| Dickeya dianthicola ME23 | DZA65_RS19920 | | nif-specific transcriptional activator NifA | insig. | 43 | 61 |
| Escherichia coli BL21 | ECD_02383 | | hydrogenase-4 transcriptional activator | cofit | 47 | 48 |
| Escherichia coli ECRC101 | OKFHMN_21850 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 47 | 48 |
| Escherichia coli ECRC101 | MCAODC_12380 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 47 | 48 |
| Escherichia coli ECRC102 | NIAGMN_19620 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 47 | 48 |
| Escherichia coli ECRC98 | JDDGAC_25795 | hyfR | DNA-binding transcriptional regulator HyfR | no data | 47 | 48 |
| Escherichia coli ECRC99 | KEDOAH_06370 | hyfR | DNA-binding transcriptional regulator HyfR | no data | 47 | 48 |
| Escherichia coli BW25113 | b2491 | hyfR | putative 2-component regulator, interaction with sigma 54 (VIMSS) | sig. | 47 | 48 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2200 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 44 | 56 |
| Escherichia coli ECOR38 | HEPCGN_21015 | hyfR | DNA-binding transcriptional activator HyfR | insig. | 44 | 56 |
| Rhodospirillum rubrum S1H | Rru_A0993 | | Transcriptional Regulator, NifA, Fis Family (NCBI) | strong | 42 | 57 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_27825 | | Fis family transcriptional regulator | insig. | 43 | 58 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF595 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 44 | 57 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 45 | 56 |
| Marinobacter adhaerens HP15 | HP15_1011 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 44 | 56 |
| Rhodanobacter denitrificans MT42 | LRK55_RS13225 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 44 | 56 |
| Escherichia coli ECOR27 | NOLOHH_13500 | | Fis family transcriptional regulator | insig. | 44 | 53 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3006 | | Sigma-54 dependent transcriptional regulator | insig. | 44 | 58 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_763 | | Sigma-54 dependent transcriptional regulator | insig. | 43 | 58 |
| Dickeya dadantii 3937 | DDA3937_RS18805 | | nif-specific transcriptional activator NifA | insig. | 43 | 61 |
| Azospirillum brasilense Sp245 | AZOBR_RS14430 | | chemotaxis protein CheY | strong | 42 | 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2422 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 42 | 57 |
| Marinobacter adhaerens HP15 | HP15_523 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 42 | 56 |
| Klebsiella michiganensis M5al | BWI76_RS18890 | | nif-specific transcriptional activator NifA | sig. | 44 | 57 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42175 | | nif-specific transcriptional activator NifA | insig. | 44 | 56 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS13485 | | sigma-54-dependent Fis family transcriptional regulator | strong | 44 | 56 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 42 | 57 |
| Shewanella loihica PV-4 | Shew_1362 | | sigma-54 dependent trancsriptional regulator (RefSeq) | strong | 43 | 56 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03783 | | Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains | insig. | 46 | 53 |
| Marinobacter adhaerens HP15 | HP15_2330 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 43 | 56 |