Homologs of Pf6N2E2_1372 from Pseudomonas fluorescens FW300-N2E2

sigma-54 dependent transcriptional regulator
SEED: sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1372 sigma-54 dependent transcriptional regulator insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_27970 Fis family transcriptional regulator insig. 96 100
o Pseudomonas syringae pv. syringae B728a Psyr_2735 Helix-turn-helix, Fis-type insig. 80 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2735 Helix-turn-helix, Fis-type insig. 80 99
o Pseudomonas fluorescens SBW25 PFLU_RS16115 sigma-54-dependent Fis family transcriptional regulator insig. 82 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16115 sigma-54-dependent Fis family transcriptional regulator insig. 82 99
o Ralstonia solanacearum GMI1000 RS_RS18250 sigma-54-dependent Fis family transcriptional regulator insig. 56 96
o Ralstonia solanacearum PSI07 RPSI07_RS00800 sigma-54-dependent Fis family transcriptional regulator insig. 55 96
o Herbaspirillum seropedicae SmR1 HSERO_RS22915 Fis family transcriptional regulator insig. 56 95
o Pseudomonas sp. RS175 PFR28_01986 Phenol regulator MopR insig. 55 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS22395 sigma-54-dependent Fis family transcriptional regulator insig. 56 96
o Ralstonia solanacearum UW163 UW163_RS22940 sigma-54-dependent Fis family transcriptional regulator insig. 56 96
o Cupriavidus basilensis FW507-4G11 RR42_RS32695 Fis family transcriptional regulator insig. 47 94
o Marinobacter adhaerens HP15 HP15_4023 helix-turn-helix, Fis-type insig. 44 93
o Alteromonas macleodii MIT1002 MIT1002_02086 Nif-specific regulatory protein insig. 43 95
o Acinetobacter radioresistens SK82 MPMX26_00910 Phenol regulator MopR insig. 40 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU2934 ntrX sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 46 56
  Rhodospirillum rubrum S1H Rru_A1388 Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) cofit 44 56
  Rhodopseudomonas palustris CGA009 TX73_007055 sigma-54-dependent Fis family transcriptional regulator cofit 42 56
  Rhodopseudomonas palustris CGA009 TX73_007390 sigma-54-dependent Fis family transcriptional regulator insig. 44 56
  Azospirillum brasilense Sp245 AZOBR_RS29300 Fis family transcriptional regulator insig. 43 56
  Shewanella oneidensis MR-1 SO3660 sigma-54 dependent transcriptional regulator/sensory box protein (NCBI ptt file) insig. 42 61
  Desulfovibrio vulgaris Miyazaki F DvMF_1324 sigma54 specific transcriptional regulator, Fis family (RefSeq) strong 45 56
  Shewanella amazonensis SB2B Sama_1549 response regulator receiver protein (RefSeq) insig. 45 56
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 46 53
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 46 53
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein cofit 46 53
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC cofit 46 53
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 46 53
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 46 53
  Desulfovibrio vulgaris Miyazaki F DvMF_1993 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) sig. 45 60
  Pseudomonas stutzeri RCH2 Psest_1765 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 45 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU0110 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) cofit 45 56
  Shewanella sp. ANA-3 Shewana3_3227 Fis family transcriptional regulator (RefSeq) insig. 48 49
  Shewanella amazonensis SB2B Sama_2834 sigma-54 dependent transcriptional regulator/sensory box protein (RefSeq) insig. 53 41
  Herbaspirillum seropedicae SmR1 HSERO_RS14390 ATPase AAA strong 46 54
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2800.1 Flagellar regulatory protein FleQ sig. 45 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU2894 flrA sigma-54 dependent transcriptional regulator (TIGR) strong 46 56
  Pseudomonas simiae WCS417 PS417_19825 ATPase AAA strong 45 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 45 56
  Pseudomonas fluorescens SBW25 PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 45 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 45 57
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3599 Flagellar regulatory protein FleQ insig. 46 57
  Pseudomonas fluorescens FW300-N2E3 AO353_18660 AAA family ATPase strong 45 57
  Shewanella oneidensis MR-1 SO3232 flrA flagellar regulatory protein A (NCBI ptt file) strong 44 56
  Shewanella sp. ANA-3 Shewana3_1338 sigma-54 dependent trancsriptional regulator (RefSeq) strong 44 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4357 Flagellar regulatory protein FleQ insig. 45 57
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 46 56
  Shewanella loihica PV-4 Shew_2341 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) insig. 45 56
  Pseudomonas sp. RS175 PFR28_01679 Regulatory protein AtoC sig. 43 58
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 43 58
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 46 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 46 56
  Pseudomonas sp. S08-1 OH686_02855 Flagellar regulatory protein FleQ cofit 44 57
  Vibrio cholerae E7946 ATCC 55056 CSW01_10670 sigma-54-dependent Fis family transcriptional regulator cofit 42 56
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01235 DNA-binding transcriptional activator HyfR insig. 48 48
  Desulfovibrio vulgaris Miyazaki F DvMF_1461 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 47 48
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS20155 sigma-54 dependent transcriptional regulator insig. 45 56
  Pseudomonas sp. RS175 PFR28_00828 Anaerobic nitric oxide reductase transcription regulator NorR strong 45 57
  Pseudomonas fluorescens FW300-N2C3 AO356_03855 AAA family ATPase strong 45 57
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2597 Flagellar regulatory protein FleQ strong 45 57
  Shewanella amazonensis SB2B Sama_2301 response regulator receiver protein (RefSeq) strong 44 56
  Pseudomonas syringae pv. syringae B728a Psyr_3461 Helix-turn-helix, Fis-type strong 44 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3461 Helix-turn-helix, Fis-type cofit 44 57
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 43 56
  Caulobacter crescentus NA1000 CCNA_03424 AAA-family response regulator tacA strong 42 56
  Caulobacter crescentus NA1000 Δfur CCNA_03424 AAA-family response regulator tacA cofit 42 56
  Escherichia coli ECRC62 BNILDI_12310 hyfR DNA-binding transcriptional regulator HyfR insig. 47 48
  Pseudomonas putida KT2440 PP_4373 Transcriptional regulator FleQ strong 44 57
  Dickeya dianthicola 67-19 HGI48_RS18785 nif-specific transcriptional activator NifA insig. 43 61
  Dickeya dianthicola ME23 DZA65_RS19920 nif-specific transcriptional activator NifA insig. 43 61
  Escherichia coli BL21 ECD_02383 hydrogenase-4 transcriptional activator cofit 47 48
  Escherichia coli ECRC101 OKFHMN_21850 hyfR DNA-binding transcriptional regulator HyfR insig. 47 48
  Escherichia coli ECRC101 MCAODC_12380 hyfR DNA-binding transcriptional regulator HyfR insig. 47 48
  Escherichia coli ECRC102 NIAGMN_19620 hyfR DNA-binding transcriptional regulator HyfR insig. 47 48
  Escherichia coli ECRC98 JDDGAC_25795 hyfR DNA-binding transcriptional regulator HyfR no data 47 48
  Escherichia coli ECRC99 KEDOAH_06370 hyfR DNA-binding transcriptional regulator HyfR no data 47 48
  Escherichia coli BW25113 b2491 hyfR putative 2-component regulator, interaction with sigma 54 (VIMSS) sig. 47 48
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 44 56
  Escherichia coli ECOR38 HEPCGN_21015 hyfR DNA-binding transcriptional activator HyfR insig. 44 56
  Rhodospirillum rubrum S1H Rru_A0993 Transcriptional Regulator, NifA, Fis Family (NCBI) strong 42 57
  Pseudomonas fluorescens FW300-N2C3 AO356_27825 Fis family transcriptional regulator insig. 43 58
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF595 two component, sigma54 specific, transcriptional regulator, Fis family strong 44 57
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 45 56
  Marinobacter adhaerens HP15 HP15_1011 two component, sigma54 specific, transcriptional regulator, Fis family insig. 44 56
  Rhodanobacter denitrificans MT42 LRK55_RS13225 sigma-54-dependent Fis family transcriptional regulator cofit 44 56
  Escherichia coli ECOR27 NOLOHH_13500 Fis family transcriptional regulator insig. 44 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3006 Sigma-54 dependent transcriptional regulator insig. 44 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_763 Sigma-54 dependent transcriptional regulator insig. 43 58
  Dickeya dadantii 3937 DDA3937_RS18805 nif-specific transcriptional activator NifA insig. 43 61
  Azospirillum brasilense Sp245 AZOBR_RS14430 chemotaxis protein CheY strong 42 62
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2422 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 42 57
  Marinobacter adhaerens HP15 HP15_523 two component, sigma54 specific, transcriptional regulator, Fis family strong 42 56
  Klebsiella michiganensis M5al BWI76_RS18890 nif-specific transcriptional activator NifA sig. 44 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS42175 nif-specific transcriptional activator NifA insig. 44 56
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS13485 sigma-54-dependent Fis family transcriptional regulator strong 44 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU1419 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) sig. 42 57
  Shewanella loihica PV-4 Shew_1362 sigma-54 dependent trancsriptional regulator (RefSeq) strong 43 56
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03783 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains insig. 46 53
  Marinobacter adhaerens HP15 HP15_2330 two component, sigma54 specific, transcriptional regulator, Fis family strong 43 56