Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1155 | | Cyn operon transcriptional activator | strong | 100 | 100 |
o | Pseudomonas fluorescens FW300-N2C3 | AO356_26385 | | LysR family transcriptional regulator | insig. | 98 | 90 |
o | Pseudomonas sp. RS175 | PFR28_01891 | | HTH-type transcriptional regulator GltR | strong | 97 | 90 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_488 | | Cyn operon transcriptional activator | insig. | 60 | 89 |
| Pseudomonas sp. RS175 | PFR28_01894 | | HTH-type transcriptional regulator HdfR | insig. | 59 | 89 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_26400 | | LysR family transcriptional regulator | insig. | 58 | 89 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1158 | | Cyn operon transcriptional activator | insig. | 59 | 89 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS05280 | | LysR family transcriptional regulator | insig. | 60 | 91 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3364 | | Cyn operon transcriptional activator | insig. | 60 | 90 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4480 | | Cyn operon transcriptional activator | insig. | 58 | 90 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS19340 | | LysR family transcriptional regulator | insig. | 58 | 90 |
| Pseudomonas fluorescens SBW25 | PFLU_RS07550 | | LysR family transcriptional regulator | insig. | 60 | 89 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS07550 | | LysR family transcriptional regulator | strong | 60 | 89 |
| Pseudomonas simiae WCS417 | PS417_07465 | | LysR family transcriptional regulator | insig. | 59 | 89 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_17985 | | LysR family transcriptional regulator | sig. | 57 | 90 |
| Pseudomonas putida KT2440 | PP_4579 | | Transcriptional regulator, LysR family | strong | 59 | 87 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS35930 | | LysR family transcriptional regulator | insig. | 41 | 90 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS09175 | | LysR family transcriptional regulator | insig. | 39 | 89 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS27710 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| Variovorax sp. SCN45 | GFF5955 | | Transcriptional regulator, LysR family | insig. | 33 | 90 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS11470 | | LysR family transcriptional regulator | insig. | 35 | 82 |
o | Marinobacter adhaerens HP15 | HP15_2680 | | protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR | insig. | 35 | 85 |
o | Rhodopseudomonas palustris CGA009 | TX73_008980 | | LysR family transcriptional regulator | insig. | 33 | 86 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS16615 | | LysR family transcriptional regulator | insig. | 36 | 73 |
| Azospirillum sp. SherDot2 | MPMX19_04948 | | HTH-type transcriptional regulator GltR | insig. | 35 | 79 |
o | Paraburkholderia graminis OAS925 | ABIE53_006554 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 82 |
| Variovorax sp. OAS795 | ABID97_RS19615 | | LysR family transcriptional regulator | no data | 36 | 73 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05275 | | transcriptional regulator, LysR family | insig. | 32 | 82 |
| Acidovorax sp. GW101-3H11 | Ac3H11_159 | | Cyn operon transcriptional activator | sig. | 36 | 89 |
| Burkholderia phytofirmans PsJN | BPHYT_RS23900 | | LysR family transcriptional regulator | insig. | 31 | 82 |
o | Dinoroseobacter shibae DFL-12 | Dshi_3151 | | transcriptional regulator, LysR family (RefSeq) | insig. | 29 | 89 |
| Sinorhizobium meliloti 1021 | SMa0498 | | LysR family transcriptional regulator | insig. | 28 | 85 |
| Pseudomonas fluorescens SBW25 | PFLU_RS21070 | | LysR family transcriptional regulator | insig. | 27 | 79 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS21070 | | LysR family transcriptional regulator | sig. | 27 | 79 |
| Pseudomonas simiae WCS417 | PS417_19015 | | LysR family transcriptional regulator | insig. | 27 | 79 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2180 | | transcriptional regulator, LysR family | sig. | 27 | 79 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2180 | | transcriptional regulator, LysR family | insig. | 27 | 79 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS07685 | | LysR family transcriptional regulator | insig. | 33 | 50 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS30475 | | LysR family transcriptional regulator | insig. | 26 | 78 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0511 | | transcriptional regulator, LysR family (RefSeq) | insig. | 29 | 75 |
| Burkholderia phytofirmans PsJN | BPHYT_RS23955 | | LysR family transcriptional regulator | insig. | 33 | 50 |
| Paraburkholderia graminis OAS925 | ABIE53_006542 | | DNA-binding transcriptional LysR family regulator | insig. | 33 | 50 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5605 | | LysR family regulatory protein | no data | 28 | 79 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS31790 | | LysR family transcriptional regulator | insig. | 30 | 52 |
| Dechlorosoma suillum PS | Dsui_1858 | | transcriptional regulator | insig. | 27 | 79 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05286 | | transcriptional regulator, LysR family | insig. | 33 | 50 |
| Variovorax sp. SCN45 | GFF620 | | Transcriptional regulator, LysR family | insig. | 26 | 85 |
| Azospirillum brasilense Sp245 | AZOBR_RS00870 | | LysR family transcriptional regulator | insig. | 32 | 50 |
| Burkholderia phytofirmans PsJN | BPHYT_RS19505 | | LysR family transcriptional regulator | insig. | 27 | 80 |
| Variovorax sp. OAS795 | ABID97_RS22240 | | LysR family transcriptional regulator | insig. | 24 | 87 |
| Dinoroseobacter shibae DFL-12 | Dshi_0727 | | transcriptional regulator, LysR family (RefSeq) | insig. | 29 | 82 |
| Shewanella sp. ANA-3 | Shewana3_1731 | cysB | transcriptional regulator CysB (RefSeq) | no data | 26 | 82 |
| Enterobacter sp. TBS_079 | MPMX20_04452 | | HTH-type transcriptional regulator MetR | strong | 25 | 77 |
| Variovorax sp. SCN45 | GFF6721 | | Transcriptional regulator, LysR family | insig. | 23 | 87 |
| Dickeya dadantii 3937 | DDA3937_RS20190 | | HTH-type transcriptional regulator HdfR | insig. | 30 | 54 |
| Burkholderia phytofirmans PsJN | BPHYT_RS11135 | | LysR family transcriptional regulator | no data | 29 | 79 |
| Variovorax sp. OAS795 | ABID97_RS07930 | | LysR family transcriptional regulator | insig. | 29 | 72 |
| Dickeya dianthicola 67-19 | HGI48_RS20335 | | HTH-type transcriptional regulator HdfR | strong | 30 | 54 |
| Dickeya dianthicola ME23 | DZA65_RS21375 | | HTH-type transcriptional regulator HdfR | cofit | 30 | 54 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4493 | | Transcriptional regulator | strong | 24 | 77 |
| Agrobacterium fabrum C58 | Atu3889 | | LysR family transcriptional regulator | insig. | 27 | 77 |
| Shewanella oneidensis MR-1 | SO2649 | cysB | cys regulon transcriptional activator (NCBI ptt file) | strong | 26 | 82 |
| Rahnella sp. WP5 | EX31_RS25370 | | HTH-type transcriptional regulator MetR | strong | 25 | 77 |
| Pectobacterium carotovorum WPP14 | HER17_RS18045 | | LysR family transcriptional regulator | cofit | 27 | 89 |
| Erwinia tracheiphila SCR3 | LU632_RS24035 | metR | HTH-type transcriptional regulator MetR | strong | 26 | 77 |
| Ralstonia solanacearum GMI1000 | RS_RS03085 | | LysR family transcriptional regulator | insig. | 31 | 51 |
| Pantoea sp. MT58 | IAI47_18315 | | HTH-type transcriptional regulator MetR | strong | 25 | 77 |
| Phaeobacter inhibens DSM 17395 | PGA1_262p00980 | | transcriptional regulator, LysR family | strong | 29 | 76 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS02605 | | LysR family transcriptional regulator | insig. | 27 | 79 |
| Azospirillum sp. SherDot2 | MPMX19_00088 | | HTH-type transcriptional regulator HdfR | insig. | 28 | 59 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3917 | | transcriptional regulator, LysR family | sig. | 27 | 71 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3917 | | transcriptional regulator, LysR family | insig. | 27 | 71 |
| Escherichia coli BL21 | ECD_03707 | | methionine biosynthesis regulon transcriptional regulator | strong | 24 | 77 |
| Escherichia fergusonii Becca | EFB2_04809 | | HTH-type transcriptional regulator MetR | insig. | 24 | 77 |
| Escherichia coli ECOR27 | NOLOHH_06460 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECOR38 | HEPCGN_13030 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECRC100 | OKFHMN_14330 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECRC101 | MCAODC_04835 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECRC102 | NIAGMN_12085 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECRC62 | BNILDI_05070 | metR | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Escherichia coli ECRC98 | JDDGAC_17955 | metR | HTH-type transcriptional regulator MetR | cofit | 24 | 77 |
| Escherichia coli ECRC99 | KEDOAH_13820 | metR | HTH-type transcriptional regulator MetR | no data | 24 | 77 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04223 | | HTH-type transcriptional regulator MetR | insig. | 24 | 77 |
| Escherichia coli BW25113 | b3828 | metR | DNA-binding transcriptional activator, homocysteine-binding (NCBI) | strong | 24 | 77 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21975 | | HTH-type transcriptional regulator MetR | no data | 24 | 77 |
| Escherichia coli Nissle 1917 | ECOLIN_RS30005 | | HTH-type transcriptional regulator MetR | no data | 24 | 77 |
| Azospirillum sp. SherDot2 | MPMX19_00224 | | HTH-type transcriptional regulator GltC | insig. | 31 | 52 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS18490 | | LysR family transcriptional regulator | insig. | 29 | 81 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1768 | | LysR family transcriptional regulator y2377 (Yersinia pestis KIM) | insig. | 27 | 72 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02372 | | transcriptional regulator, LysR family | sig. | 27 | 80 |
| Erwinia tracheiphila SCR3 | LU632_RS24450 | hdfR | HTH-type transcriptional regulator HdfR | strong | 32 | 46 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3348 | | Transcriptional regulator | insig. | 29 | 71 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4759 | | Transcriptional regulators, LysR family | insig. | 25 | 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF253 | | Transcriptional activator MetR | insig. | 24 | 77 |
| Rhizobium sp. OAE497 | ABIE40_RS03500 | | LysR substrate-binding domain-containing protein | strong | 29 | 51 |
| Marinobacter adhaerens HP15 | HP15_2653 | | transcriptional regulator, LysR family protein | cofit | 29 | 79 |
| Variovorax sp. SCN45 | GFF6015 | | Transcriptional regulator PA0877, LysR family | insig. | 27 | 72 |
| Dickeya dadantii 3937 | DDA3937_RS20385 | | HTH-type transcriptional regulator MetR | strong | 24 | 77 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09455 | | LysR family transcriptional regulator | insig. | 24 | 86 |
| Serratia liquefaciens MT49 | IAI46_24385 | | HTH-type transcriptional regulator HdfR | insig. | 30 | 49 |