Homologs of PP_4405 from Pseudomonas putida KT2440

Sensory box protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4405 Sensory box protein insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS00865 diguanylate cyclase insig. 90 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17000 diguanylate cyclase insig. 67 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5324 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 66 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2978 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 65 97
o Pseudomonas fluorescens SBW25 PFLU_RS25155 sensor domain-containing diguanylate cyclase insig. 64 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25155 sensor domain-containing diguanylate cyclase sig. 64 99
o Pseudomonas orientalis W4I3 QF045_RS25595 diguanylate cyclase insig. 62 97
o Pseudomonas simiae WCS417 PS417_23340 diguanylate cyclase insig. 64 97
o Pseudomonas fluorescens FW300-N2E3 AO353_15630 diguanylate cyclase insig. 63 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04816 hypothetical protein cofit 57 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37635 sensor domain-containing diguanylate cyclase sig. 47 93
o Pseudomonas aeruginosa MRSN321 DY961_RS21660 sensor domain-containing diguanylate cyclase insig. 46 93
o Pseudomonas aeruginosa PA14 IKLFDK_23745 histidine kinase insig. 46 93
o Acidovorax sp. GW101-3H11 Ac3H11_3698 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 91
  Methylophilus sp. DMC18 GFF1905 hypothetical protein insig. 30 96
  Rhodanobacter denitrificans MT42 LRK55_RS00270 sensor domain-containing diguanylate cyclase insig. 37 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00530 sensor domain-containing diguanylate cyclase insig. 37 91
  Methylophilus sp. DMC18 GFF1876 hypothetical protein cofit 29 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09600 sensor domain-containing diguanylate cyclase insig. 37 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS18215 sensor domain-containing diguanylate cyclase insig. 33 91
  Rhodanobacter sp. FW510-T8 OKGIIK_06735 Sensor domain-containing diguanylate cyclase insig. 37 91
  Shewanella amazonensis SB2B Sama_0082 GGDEF domain-containing protein (RefSeq) sig. 30 92
  Magnetospirillum magneticum AMB-1 AMB_RS23160 PAS domain S-box protein insig. 36 64
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 46 48
  Magnetospirillum magneticum AMB-1 AMB_RS23425 PAS domain S-box protein insig. 36 64
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 30 96
  Pseudomonas aeruginosa MRSN321 DY961_RS02640 GGDEF domain-containing protein insig. 48 48
  Pseudomonas aeruginosa PUPa3 DQ20_RS32955 GGDEF domain-containing protein insig. 48 48
  Pseudomonas aeruginosa PA14 IKLFDK_14585 GGDEF domain-containing protein insig. 48 48
  Shewanella loihica PV-4 Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 30 91
  Shewanella loihica PV-4 Shew_3023 diguanylate cyclase (RefSeq) insig. 43 56
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 42 52
  Pseudomonas sp. S08-1 OH686_21185 PAS/PAC domain insig. 32 90
  Herbaspirillum seropedicae SmR1 HSERO_RS05075 diguanylate cyclase insig. 45 51
  Dechlorosoma suillum PS Dsui_2953 diguanylate cyclase (GGDEF) domain-containing protein cofit 44 53
  Ralstonia sp. UNC404CL21Col ABZR87_RS19005 sensor domain-containing diguanylate cyclase strong 30 96
  Dechlorosoma suillum PS Dsui_1789 diguanylate cyclase (GGDEF) domain-containing protein insig. 41 54
  Acidovorax sp. GW101-3H11 Ac3H11_4322 Bll3041 protein insig. 44 50
  Dechlorosoma suillum PS Dsui_2944 diguanylate cyclase (GGDEF) domain-containing protein insig. 41 58
  Magnetospirillum magneticum AMB-1 AMB_RS23415 PAS domain S-box protein cofit 36 64
  Pseudomonas fluorescens FW300-N2C3 AO356_17195 deoxyribonuclease sig. 45 47
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 42 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5364 GGDEF domain protein insig. 45 47
  Synechococcus elongatus PCC 7942 Synpcc7942_0490 diguanylate cyclase with PAS/PAC sensor sig. 28 92
  Magnetospirillum magneticum AMB-1 AMB_RS04735 diguanylate cyclase cofit 37 59
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 42 51
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 46 48
  Pseudomonas sp. RS175 PFR28_03580 hypothetical protein insig. 45 48
  Pseudomonas sp. BP01 JOY50_RS11815 wspR Wsp signal transduction system regulator diguanylate cyclase WspR insig. 42 55
  Pseudomonas sp. DMC3 GFF4253 hypothetical protein insig. 30 95
  Pseudomonas stutzeri RCH2 Psest_0338 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 33 92
  Paraburkholderia graminis OAS925 ABIE53_006414 diguanylate cyclase (GGDEF)-like protein insig. 46 50
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 45 50
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 40 51
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 94
  Marinobacter adhaerens HP15 HP15_4169 diguanylate cyclase (GGDEF domain) insig. 37 59
  Herbaspirillum seropedicae SmR1 HSERO_RS13895 diguanylate cyclase insig. 41 51
  Marinobacter adhaerens HP15 HP15_2735 diguanylate cyclase with PAS/PAC sensor insig. 32 97
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 42 60
  Pseudomonas putida KT2440 PP_0798 GGDEF domain protein insig. 45 47
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 41 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 41 47
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 30 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS16760 GGDEF domain-containing protein insig. 44 50
  Pseudomonas aeruginosa PA14 IKLFDK_16145 GGDEF domain-containing protein sig. 44 47
  Pseudomonas aeruginosa PUPa3 DQ20_RS34485 GGDEF domain-containing protein insig. 44 47
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 39 56
  Acidovorax sp. GW101-3H11 Ac3H11_1024 GGDEF/response regulator receiver domain protein insig. 32 96
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 45 46
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 42 52
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 41 52
  Variovorax sp. SCN45 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 63
  Rhodospirillum rubrum S1H Rru_A0985 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 45 50
  Magnetospirillum magneticum AMB-1 AMB_RS09110 diguanylate cyclase response regulator insig. 45 55
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00405 hypothetical protein cofit 32 95
  Burkholderia phytofirmans PsJN BPHYT_RS29040 diguanylate cyclase strong 31 91
  Pseudomonas aeruginosa MRSN321 DY961_RS01055 GGDEF domain-containing protein sig. 43 47
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 37 62
  Alteromonas macleodii MIT1002 MIT1002_01743 putative diguanylate cyclase YdaM insig. 36 59
  Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 31 95
  Azospirillum sp. SherDot2 MPMX19_05017 hypothetical protein insig. 40 52
  Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 38 56
  Pseudomonas orientalis W4I3 QF045_RS03980 sensor domain-containing diguanylate cyclase cofit 31 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 30 95
  Pseudomonas syringae pv. syringae B728a Psyr_0088 PAS:GGDEF insig. 30 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0088 PAS:GGDEF insig. 30 95
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 49 47
  Desulfovibrio vulgaris Miyazaki F DvMF_3203 diguanylate cyclase (RefSeq) cofit 43 50
  Shewanella oneidensis MR-1 SO4407 GGDEF family protein (NCBI ptt file) insig. 39 58
  Methylophilus sp. DMC18 GFF1240 hypothetical protein insig. 40 47
  Magnetospirillum magneticum AMB-1 AMB_RS03740 signal transduction protein insig. 39 53
  Marinobacter adhaerens HP15 HP15_2105 response regulator receiver domain protein (CheY-) insig. 40 55
  Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 38 52
  Marinobacter adhaerens HP15 HP15_3727 diguanylate cyclase (GGDEF domain) insig. 32 81
  Acidovorax sp. GW101-3H11 Ac3H11_1782 Putative diheme cytochrome c-553 insig. 41 54
  Rhodospirillum rubrum S1H Rru_A2511 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 43 50
  Pseudomonas sp. SVBP6 COO64_RS05065 PleD family two-component system response regulator insig. 42 55
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 40 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3551 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 31 91