Homologs of PP_4244 from Pseudomonas putida KT2440

alternative sigma factor
SEED: Sigma factor PvdS, controling pyoverdin biosynthesis
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 95 100
o Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 90 100
o Pseudomonas aeruginosa MRSN321 DY961_RS18585 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 85 100
o Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS sig. 85 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS59800 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 85 100
o Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 84 100
o Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 85 98
o Pseudomonas protegens RBAN4 FABNJH_21640 rpoE RNA polymerase factor sigma-70 insig. 84 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 83 100
o Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 82 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 82 100
o Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 82 100
o Pseudomonas orientalis W4I3 QF045_RS21700 RNA polymerase factor sigma-70 no data 82 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein insig. 82 100
o Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 84 98
o Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 80 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 81 100
o Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 80 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 80 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 85 88
o Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 57 91
o Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 56 91
o Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 48 93
o Pseudomonas sp. S08-1 OH686_01025 hypothetical protein insig. 42 86
  Burkholderia phytofirmans PsJN BPHYT_RS20215 RNA polymerase sigma 70 sig. 42 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS15840 RNA polymerase factor sigma-70 sig. 40 91
o Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 37 94
  Pseudomonas protegens RBAN4 FABNJH_18540 RNA polymerase subunit sigma-24 insig. 35 88
o Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 37 88
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 36 91
o Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 37 89
  Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 34 84
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 33 90
  Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 34 86
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 38 84
  Agrobacterium fabrum C58 Atu3387 sigma factor insig. 33 89
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor insig. 32 83
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 32 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 32 83
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 32 90
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 35 86
  Pseudomonas aeruginosa MRSN321 DY961_RS22365 RNA polymerase sigma factor insig. 33 86
  Pseudomonas aeruginosa PA14 IKLFDK_23065 RNA polymerase sigma factor sig. 33 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS36960 RNA polymerase sigma factor insig. 33 86
  Pseudomonas sp. BP01 JOY50_RS01650 sigma-70 family RNA polymerase sigma factor insig. 28 93
  Pseudomonas sp. SVBP6 COO64_RS11395 RNA polymerase sigma factor insig. 31 91
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 32 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 32 90
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 32 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 32 90
  Pseudomonas sp. BP01 JOY50_RS17880 RNA polymerase sigma factor insig. 32 86
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 32 86
  Pseudomonas sp. BP01 JOY50_RS22945 sigma-70 family RNA polymerase sigma factor insig. 31 90
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 36 80
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 34 83
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 32 90
  Pseudomonas protegens RBAN4 FABNJH_05120 RNA polymerase sigma factor insig. 31 90
  Pseudomonas syringae pv. syringae B728a Psyr_1107 Sigma-70 region 2 insig. 33 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1107 Sigma-70 region 2 insig. 33 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01230 putative RNA polymerase sigma factor FecI insig. 32 90
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 33 76
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 32 84
  Pseudomonas protegens RBAN4 FABNJH_16210 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 89
  Dechlorosoma suillum PS Dsui_2099 RNA polymerase sigma factor, sigma-70 family no data 31 75
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 29 90
  Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 33 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 33 74
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 32 78
  Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 31 91
  Pseudomonas sp. SVBP6 COO64_RS22780 RNA polymerase sigma factor insig. 32 86
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 31 86
  Pseudomonas orientalis W4I3 QF045_RS08105 RNA polymerase sigma factor insig. 31 90
  Agrobacterium fabrum C58 Atu3692 sigma factor sig. 30 77
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 31 86
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 35 76
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 32 93
  Pseudomonas sp. BP01 JOY50_RS15495 RNA polymerase sigma factor insig. 29 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 32 74
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 34 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 32 76
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 33 90
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 31 87
  Azospirillum sp. SherDot2 MPMX19_03082 ECF RNA polymerase sigma factor SigE insig. 29 90
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 35 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05333 putative RNA polymerase sigma factor FecI insig. 31 86
  Pseudomonas sp. DMC3 GFF1893 putative RNA polymerase sigma factor FecI insig. 30 90
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 29 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 34 87
  Pseudomonas sp. SVBP6 COO64_RS03795 RNA polymerase sigma factor insig. 29 90
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 32 89
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 35 77
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 34 88
  Pseudomonas simiae WCS417 PS417_26065 RNA polymerase sigma factor insig. 30 86
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 30 90
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 30 90
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 31 89
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 31 86
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 31 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 31 87
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 93
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 28 97
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 27 90
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 33 86
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 30 90
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 29 80
  Methylophilus sp. DMC18 GFF1981 putative RNA polymerase sigma factor FecI insig. 28 89
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 33 90
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 32 90
  Pseudomonas fluorescens SBW25 PFLU_RS27705 RNA polymerase sigma factor insig. 31 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27705 RNA polymerase sigma factor insig. 31 86
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 31 86
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 30 86
  Pseudomonas sp. SVBP6 COO64_RS10870 sigma-70 family RNA polymerase sigma factor insig. 29 93
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 29 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 28 82
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 33 87
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 32 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 32 94
  Pseudomonas protegens RBAN4 FABNJH_21620 RNA polymerase subunit sigma insig. 33 86
  Pseudomonas orientalis W4I3 QF045_RS19140 sigma-70 family RNA polymerase sigma factor insig. 34 77
  Rhodospirillum rubrum S1H Rru_A2372 Sigma-24 (FecI) (NCBI) insig. 31 87
  Pseudomonas sp. BP01 JOY50_RS25550 sigma factor insig. 48 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 33 84
  Methylophilus sp. DMC18 GFF1837 hypothetical protein insig. 29 90
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 35 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 35 77
  Pseudomonas sp. BP01 JOY50_RS12920 RNA polymerase sigma factor insig. 31 82
  Pseudomonas sp. BP01 JOY50_RS24800 sigma-70 family RNA polymerase sigma factor insig. 34 77
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 34 88
  Pseudomonas protegens RBAN4 FABNJH_07175 Sigma-70 family RNA polymerase sigma factor insig. 28 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 31 90
  Agrobacterium fabrum C58 Atu5309 ECF family RNA polymerase sigma factor no data 31 91
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 33 84
  Pseudomonas protegens RBAN4 FABNJH_16970 RNA polymerase sigma-70 factor, ECF family insig. 32 74
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 28 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 89
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 29 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 29 94
  Methylophilus sp. DMC18 GFF1870 hypothetical protein insig. 32 71
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 32 84
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 31 89
  Pseudomonas protegens RBAN4 FABNJH_20875 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 89
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 34 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 34 77
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 31 89
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 31 88
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 30 74
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 30 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 30 74
  Pseudomonas segetis P6 ACVTMO_RS11095 sigma-70 family RNA polymerase sigma factor insig. 30 77
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 29 87
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 28 93
  Pseudomonas protegens RBAN4 FABNJH_21070 RNA polymerase sigma factor insig. 32 84
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 31 78
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 30 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 27 94
  Sphingobium sp. HT1-2 GFF2039 RNA polymerase ECF-type sigma factor cofit 30 86
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 30 77
  Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 29 94
  Variovorax sp. SCN45 GFF723 RNA polymerase ECF-type sigma factor insig. 26 86
  Burkholderia phytofirmans PsJN BPHYT_RS21530 RNA polymerase subunit sigma-24 insig. 27 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02444 putative RNA polymerase sigma factor FecI cofit 32 78
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 32 88
  Pseudomonas protegens RBAN4 FABNJH_28730 RNA polymerase sigma factor insig. 29 86
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 32 77
  Paraburkholderia graminis OAS925 ABIE53_002123 RNA polymerase sigma factor (sigma-70 family) sig. 28 90
  Pseudomonas protegens RBAN4 FABNJH_27185 hasI RNA polymerase sigma-70 factor, ECF subfamily, HasI insig. 28 85
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 27 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 32 77
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 30 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 29 89
  Pseudomonas orientalis W4I3 QF045_RS00470 RNA polymerase sigma factor insig. 29 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0612 RNA polymerase sigma factor, sigma-70 family insig. 32 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 89
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 26 93
  Variovorax sp. SCN45 GFF6854 RNA polymerase ECF-type sigma factor insig. 33 77
  Paraburkholderia sabiae LMG 24235 QEN71_RS14060 sigma-70 family RNA polymerase sigma factor insig. 30 90
  Pseudomonas sp. BP01 JOY50_RS11380 RNA polymerase sigma factor insig. 29 89
  Pseudomonas putida KT2440 PP_1008 RNA polymerase subunit sigma-24 strong 29 89
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 28 86
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 27 74
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 30 92
  Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 30 92
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 78
  Pseudomonas protegens RBAN4 FABNJH_12530 RNA polymerase subunit sigma insig. 27 90
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 27 87
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 33 76
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 27 92
  Sphingobium sp. HT1-2 GFF5276 RNA polymerase, sigma-24 subunit, ECF subfamily cofit 28 69
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 77
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 32 84
  Variovorax sp. SCN45 GFF791 RNA polymerase sigma factor RpoE insig. 29 89
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 29 87
  Pseudomonas sp. BP01 JOY50_RS26985 sigma-70 family RNA polymerase sigma factor insig. 31 77
  Pseudomonas protegens RBAN4 FABNJH_23875 RNA polymerase sigma-70 factor, ECF family insig. 29 90
  Pseudomonas segetis P6 ACVTMO_RS15980 sigma-70 family RNA polymerase sigma factor insig. 32 76
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 30 89
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 29 86
  Bacteroides ovatus ATCC 8483 BACOVA_01066 hypothetical protein insig. 29 90
  Pseudomonas sp. DMC3 GFF87 putative RNA polymerase sigma factor FecI insig. 28 86
  Pseudomonas sp. RS175 PFR28_00559 ECF RNA polymerase sigma factor SigE insig. 28 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 31 81
  Pseudomonas fluorescens FW300-N2E3 AO353_24020 RNA polymerase subunit sigma insig. 30 89
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 29 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2474 RNA polymerase sigma-70 factor, ECF subfamily insig. 28 86
  Pseudomonas aeruginosa PUPa3 DQ20_RS53290 RNA polymerase sigma factor sig. 27 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00202 RNA polymerase sigma factor, sigma-70 family insig. 27 93
  Pectobacterium carotovorum WPP14 HER17_RS15360 sigma-70 family RNA polymerase sigma factor insig. 31 85
  Pseudomonas segetis P6 ACVTMO_RS03680 sigma-70 family RNA polymerase sigma factor insig. 30 86
  Rhodopseudomonas palustris CGA009 TX73_006850 RNA polymerase sigma factor insig. 30 82
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 30 90
  Pseudomonas aeruginosa PA14 IKLFDK_29070 RNA polymerase subunit sigma sig. 30 89
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 28 76
  Pseudomonas sp. DMC3 GFF5154 hypothetical protein insig. 28 91
  Pseudomonas aeruginosa MRSN321 DY961_RS19165 RNA polymerase sigma factor insig. 27 91
  Pseudomonas aeruginosa PA14 IKLFDK_06490 RNA polymerase subunit sigma-70 insig. 27 91
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 29 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04694 ECF RNA polymerase sigma factor SigE cofit 27 90
  Pseudomonas sp. DMC3 GFF4294 putative RNA polymerase sigma factor FecI insig. 35 62
  Variovorax sp. SCN45 GFF5284 RNA polymerase ECF-type sigma factor insig. 33 77
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 32 76
  Bacteroides ovatus ATCC 8483 BACOVA_00923 RNA polymerase sigma-70 factor insig. 30 74
  Pseudomonas protegens RBAN4 FABNJH_00760 ECF family RNA polymerase sigma factor insig. 29 93
  Pseudomonas aeruginosa MRSN321 DY961_RS10260 sigma-70 family RNA polymerase sigma factor insig. 31 76
  Pseudomonas aeruginosa PUPa3 DQ20_RS51795 sigma-70 family RNA polymerase sigma factor insig. 31 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 28 80
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 27 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 27 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 32 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 31 84
  Bacteroides ovatus ATCC 8483 BACOVA_03554 RNA polymerase sigma-70 factor cofit 27 81
  Pseudomonas protegens RBAN4 FABNJH_12375 RNA polymerase subunit sigma-70 insig. 26 93
  Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 30 89
  Pseudomonas aeruginosa MRSN321 DY961_RS16685 sigma-70 family RNA polymerase sigma factor sig. 28 87
  Pseudomonas aeruginosa PA14 IKLFDK_10240 RNA polymerase subunit sigma insig. 28 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS38970 sigma-70 family RNA polymerase sigma factor insig. 28 87
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 27 89
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 29 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 29 85
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 29 79
  Pseudomonas fluorescens FW300-N2E3 AO353_03435 RNA polymerase subunit sigma-24 insig. 28 90
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 27 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 31 78
  Phocaeicola dorei CL03T12C01 ABI39_RS03325 RNA polymerase sigma-70 factor insig. 30 83
  Methylophilus sp. DMC18 GFF1839 hypothetical protein insig. 29 75
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 28 85
  Pectobacterium carotovorum WPP14 HER17_RS21290 sigma-70 family RNA polymerase sigma factor insig. 27 87
  Bacteroides stercoris CC31F HMPREF1181_RS02545 sigma-70 family RNA polymerase sigma factor insig. 30 76