| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Azospirillum sp. SherDot2 | MPMX19_02822 | | HTH-type transcriptional regulator ArgP | insig. | 100 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2331 | | Cys regulon transcriptional activator CysB | no data | 53 | 90 |
| o | Pseudomonas sp. BP01 | JOY50_RS10315 | | LysR family transcriptional regulator | insig. | 54 | 90 |
| o | Pseudomonas simiae WCS417 | PS417_07200 | | LysR family transcriptional regulator | insig. | 49 | 95 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02270 | | HTH-type transcriptional regulator ArgP | cofit | 48 | 91 |
| | Pseudomonas sp. BP01 | JOY50_RS06825 | | LysR family transcriptional regulator | insig. | 49 | 91 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS15385 | | LysR family transcriptional regulator | insig. | 48 | 91 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS07845 | | LysR family transcriptional regulator | insig. | 48 | 90 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_184 | | Chromosome initiation inhibitor | insig. | 47 | 90 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_19480 | | LysR family transcriptional regulator | insig. | 48 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2324 | | Chromosome initiation inhibitor | insig. | 46 | 90 |
| o | Sinorhizobium meliloti 1021 | SM_b21180 | | LysR family transcriptional regulator | insig. | 43 | 89 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19055 | | LysR family transcriptional regulator | insig. | 46 | 85 |
| | Sinorhizobium meliloti 1021 | SM_b21434 | | LysR family transcriptional regulator | insig. | 39 | 89 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17450 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| | Rahnella sp. WP5 | EX31_RS12125 | | LysR family transcriptional regulator | insig. | 26 | 86 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1318 | | Transcriptional regulator | insig. | 28 | 87 |
| | Rhizobium sp. OAE497 | ABIE40_RS16890 | | LysR family transcriptional regulator | insig. | 30 | 84 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS15015 | | LysR substrate-binding domain-containing protein | strong | 28 | 89 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18350 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42120 | | LysR substrate-binding domain-containing protein | insig. | 28 | 89 |
| | Sinorhizobium meliloti 1021 | SMc01651 | | transcriptional regulator | insig. | 29 | 84 |
| | Pseudomonas sp. BP01 | JOY50_RS26665 | | LysR family transcriptional regulator | insig. | 29 | 83 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06285 | | LysR family transcriptional regulator | insig. | 28 | 75 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3125 | | Transcriptional regulators, LysR family | insig. | 27 | 75 |
| | Pseudomonas sp. RS175 | PFR28_00349 | | HTH-type transcriptional regulator GltC | insig. | 27 | 75 |
| | Pseudomonas sp. S08-1 | OH686_10780 | | Transcriptional regulator, LysR family | insig. | 25 | 89 |
| | Shewanella loihica PV-4 | Shew_1440 | | LysR family transcriptional regulator (RefSeq) | no data | 26 | 87 |
| | Pantoea sp. MT58 | IAI47_17745 | | LysR family transcriptional regulator | insig. | 27 | 90 |
| | Serratia liquefaciens MT49 | IAI46_11915 | | LysR family transcriptional regulator | cofit | 27 | 77 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12500 | | LysR family transcriptional regulator | insig. | 29 | 82 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11480 | | LysR family transcriptional regulator | insig. | 27 | 78 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21070 | | LysR family transcriptional regulator | insig. | 27 | 90 |
| | Azospirillum sp. SherDot2 | MPMX19_03701 | | hypothetical protein | insig. | 29 | 79 |
| | Shewanella sp. ANA-3 | Shewana3_1691 | | LysR family transcriptional regulator (RefSeq) | insig. | 26 | 87 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2139 | | transcriptional regulator, LysR family | insig. | 28 | 88 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0203 | | Transcriptional regulator | insig. | 27 | 83 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4759 | | Transcriptional regulators, LysR family | insig. | 26 | 75 |
| | Rhodospirillum rubrum S1H | Rru_A2899 | | Transcriptional Regulator, LysR family (NCBI) | strong | 24 | 92 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS03405 | | LysR family transcriptional regulator | insig. | 25 | 89 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06010 | | LysR family transcriptional regulator | insig. | 27 | 75 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06010 | | LysR family transcriptional regulator | sig. | 27 | 75 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05085 | | LysR family transcriptional regulator | sig. | 27 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35360 | | LysR family transcriptional regulator | no data | 29 | 81 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01359 | | HTH-type transcriptional regulator GltC | cofit | 26 | 75 |
| | Pseudomonas simiae WCS417 | PS417_05950 | | LysR family transcriptional regulator | insig. | 26 | 75 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04260 | | LysR family transcriptional regulator | insig. | 24 | 75 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3030 | | Transcriptional regulators, LysR family | insig. | 26 | 75 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04511 | | DNA-binding transcriptional regulator, LysR family | insig. | 28 | 73 |
| | Shewanella oneidensis MR-1 | SO1916 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 26 | 87 |
| | Pseudomonas sp. S08-1 | OH686_06895 | | Transcriptional regulator, LysR family | insig. | 25 | 80 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19155 | | LysR family transcriptional regulator | insig. | 29 | 75 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07215 | | LysR family transcriptional regulator | insig. | 32 | 72 |
| | Pseudomonas putida KT2440 | PP_3179 | | Transcriptional regulator, LysR family | sig. | 29 | 73 |
| | Marinobacter adhaerens HP15 | HP15_1835 | | transcriptional regulator LysR family protein | sig. | 34 | 45 |
| | Pseudomonas sp. S08-1 | OH686_11350 | | Transcriptional regulator GbuR | insig. | 28 | 78 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 26 | 71 |
| | Erwinia amylovora T8 | OLJFJH_03365 | | LysR family transcriptional regulator | insig. | 25 | 86 |
| | Shewanella amazonensis SB2B | Sama_2215 | | LysR family transcriptional regulator (RefSeq) | strong | 26 | 87 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03831 | | Hca operon transcriptional activator HcaR | cofit | 29 | 74 |
| | Alteromonas macleodii MIT1002 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | insig. | 32 | 40 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_06755 | | LysR family transcriptional regulator | sig. | 28 | 89 |
| | Dechlorosoma suillum PS | Dsui_3396 | | transcriptional regulator | insig. | 27 | 85 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04893 | | transcriptional regulator, LysR family | insig. | 32 | 73 |
| | Pseudomonas stutzeri RCH2 | Psest_0368 | | Transcriptional regulator | insig. | 29 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23685 | | LysR substrate-binding domain-containing protein | insig. | 28 | 90 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16045 | | LysR family transcriptional regulator | insig. | 27 | 90 |
| | Rhodopseudomonas palustris CGA009 | TX73_002855 | | LysR family transcriptional regulator | insig. | 27 | 74 |
| | Pseudomonas stutzeri RCH2 | Psest_2659 | | Transcriptional regulator | insig. | 31 | 74 |
| | Paraburkholderia graminis OAS925 | ABIE53_006314 | | DNA-binding transcriptional LysR family regulator | sig. | 26 | 74 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03395 | | LysR family transcriptional regulator | insig. | 26 | 88 |
| | Pseudomonas sp. BP01 | JOY50_RS14160 | | LysR family transcriptional regulator | insig. | 26 | 87 |
| | Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 29 | 56 |
| | Escherichia coli ECRC100 | OKFHMN_22230 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 27 | 73 |
| | Escherichia coli ECRC101 | MCAODC_12760 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 27 | 73 |
| | Escherichia coli ECRC98 | JDDGAC_26180 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | insig. | 27 | 73 |
| | Escherichia coli ECRC99 | KEDOAH_05990 | yfeR | Uncharacterized HTH-type transcriptional regulator YfeR | no data | 27 | 73 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24015 | | LysR family transcriptional regulator | insig. | 27 | 81 |
| | Pseudomonas sp. S08-1 | OH686_14915 | | Transcriptional regulator, LysR family | insig. | 26 | 86 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30315 | | LysR family transcriptional regulator | insig. | 26 | 74 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10505 | | LysR family transcriptional regulator | insig. | 25 | 86 |
| | Sinorhizobium meliloti 1021 | SMc01225 | | transcriptional regulator | no data | 23 | 87 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS21390 | | LysR family transcriptional regulator | insig. | 27 | 81 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS37900 | | LysR family transcriptional regulator | insig. | 27 | 81 |
| | Pseudomonas sp. BP01 | JOY50_RS12745 | | LysR family transcriptional regulator | insig. | 26 | 88 |
| | Pseudomonas putida KT2440 | PP_3366 | | Transcriptional regulator, LysR family | sig. | 26 | 87 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1763 | | transcriptional regulator, LysR family (RefSeq) | no data | 26 | 87 |
| | Pseudomonas segetis P6 | ACVTMO_RS15235 | | LysR family transcriptional regulator | insig. | 29 | 73 |
| | Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 28 | 86 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1212.1 | | transcriptional regulator | insig. | 27 | 86 |
| | Paraburkholderia graminis OAS925 | ABIE53_001710 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 73 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00177 | | transcriptional regulator, LysR family | insig. | 26 | 88 |
| | Acinetobacter radioresistens SK82 | MPMX26_01607 | | HTH-type transcriptional regulator GltC | no data | 27 | 73 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS21255 | | LysR family transcriptional regulator | strong | 25 | 82 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25465 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 24 | 87 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57915 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 24 | 87 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS05800 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS46990 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | strong | 25 | 90 |
| | Methylophilus sp. DMC18 | GFF2032 | | Hydrogen peroxide-inducible genes activator | insig. | 23 | 76 |