Homologs of MMJJ_RS07175 from Methanococcus maripaludis JJ

DEAD/DEAH box helicase
SEED: Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)
KEGG: fanconi anemia group M protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Methanococcus maripaludis JJ MMJJ_RS07175 DEAD/DEAH box helicase cofit 100 100
o Methanococcus maripaludis S2 MMP_RS07180 DEAD/DEAH box helicase sig. 96 100
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1599 Superfamily II DNA and RNA helicases insig. 29 17
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09685 DEAD/DEAH box helicase insig. 33 17
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14945 helicase insig. 31 21
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 29 23
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 29 23
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 30 20
  Bacteroides ovatus ATCC 8483 BACOVA_04028 DEAD/DEAH box helicase insig. 30 14
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS04305 DEAD/DEAH box helicase insig. 27 15
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 32 17
  Bacteroides thetaiotaomicron VPI-5482 BT1154 ATP-independent RNA helicase (NCBI ptt file) sig. 29 14
  Phocaeicola dorei CL03T12C01 ABI39_RS16900 DEAD/DEAH box helicase insig. 27 15
  Enterobacter sp. TBS_079 MPMX20_03447 ATP-dependent RNA helicase SrmB strong 28 20
  Mycobacterium tuberculosis H37Rv Rv3211 Probable ATP-dependent RNA helicase RhlE no data 31 16
  Bifidobacterium breve UCC2003 BBR_RS14880 ATP-dependent helicase sig. 25 27
  Enterobacter asburiae PDN3 EX28DRAFT_0069 Superfamily II DNA and RNA helicases insig. 28 20
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 24 57
  Escherichia coli BL21 ECD_02470 ATP-dependent RNA helicase strong 32 17
  Escherichia fergusonii Becca EFB2_01320 ATP-dependent RNA helicase SrmB strong 32 17
  Escherichia coli ECOR27 NOLOHH_13035 srmB ATP-dependent RNA helicase SrmB strong 32 17
  Escherichia coli ECOR38 HEPCGN_20505 srmB ATP-dependent RNA helicase SrmB strong 32 17
  Escherichia coli ECRC101 OKFHMN_21360 srmB ATP-dependent RNA helicase SrmB insig. 32 17
  Escherichia coli ECRC101 MCAODC_11890 srmB ATP-dependent RNA helicase SrmB sig. 32 17
  Escherichia coli ECRC102 NIAGMN_19130 srmB ATP-dependent RNA helicase SrmB insig. 32 17
  Escherichia coli ECRC62 BNILDI_11835 srmB ATP-dependent RNA helicase SrmB sig. 32 17
  Escherichia coli ECRC98 JDDGAC_25025 srmB ATP-dependent RNA helicase SrmB no data 32 17
  Escherichia coli ECRC99 KEDOAH_06860 srmB ATP-dependent RNA helicase SrmB no data 32 17
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01131 ATP-dependent RNA helicase SrmB strong 32 17
  Escherichia coli Nissle 1917 ECOLIN_RS14580 ATP-dependent RNA helicase SrmB cofit 32 17
  Escherichia coli BW25113 b2576 srmB ATP-dependent RNA helicase (NCBI) strong 32 17
  Shewanella sp. ANA-3 Shewana3_1162 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 29 20
  Bacteroides stercoris CC31F HMPREF1181_RS16875 DEAD/DEAH box helicase insig. 29 16
  Bifidobacterium breve UCC2003 BBR_RS10690 DUF3427 domain-containing protein cofit 28 20
  Dickeya dianthicola ME23 DZA65_RS16945 ATP-dependent RNA helicase SrmB cofit 32 16
  Klebsiella michiganensis M5al BWI76_RS12705 ATP-dependent RNA helicase insig. 29 20
  Dickeya dianthicola 67-19 HGI48_RS15865 ATP-dependent RNA helicase SrmB cofit 32 14
  Shewanella oneidensis MR-1 SO3388 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 29 20
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 27 19
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2274.1 ATP-dependent 23S rRNA helicase DbpA sig. 26 31
  Phaeobacter inhibens DSM 17395 PGA1_c11390 putative ATP-dependent RNA helicase RhlE sig. 32 15
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3407 Superfamily II DNA and RNA helicases insig. 28 18
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 26 23
  Klebsiella michiganensis M5al BWI76_RS21370 ATP-dependent RNA helicase SrmB insig. 31 17
  Shewanella oneidensis MR-1 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) strong 26 19
  Rahnella sp. WP5 EX31_RS21785 ATP-dependent RNA helicase SrmB cofit 26 26
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase insig. 30 15
  Bacteroides thetaiotaomicron VPI-5482 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) no data 30 19
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 29 17
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18930 RNA helicase strong 28 23
  Shewanella loihica PV-4 Shew_1454 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 28 20
  Pseudomonas stutzeri RCH2 Psest_0344 Superfamily II DNA and RNA helicases insig. 28 19
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2104 ATP-dependent RNA helicase SrmB insig. 29 16
  Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 27 19
  Dickeya dadantii 3937 DDA3937_RS15780 ATP-dependent RNA helicase SrmB strong 31 16
  Dickeya dadantii 3937 DDA3937_RS11045 ATP-dependent RNA helicase DbpA insig. 29 20
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 29 15
  Dickeya dianthicola 67-19 HGI48_RS11065 ATP-dependent RNA helicase DbpA insig. 28 20
  Dickeya dianthicola ME23 DZA65_RS11470 ATP-dependent RNA helicase DbpA insig. 28 20
  Desulfovibrio vulgaris Hildenborough JW710 DVU3088 deaD ATP-dependent RNA helicase, DEAD/DEAH box family (TIGR) sig. 32 14
  Escherichia coli BL21 ECD_01320 ATP-dependent RNA helicase, specific for 23S rRNA insig. 29 17
  Escherichia fergusonii Becca EFB2_02584 ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli ECOR27 NOLOHH_19875 dbpA ATP-dependent RNA helicase DbpA no data 29 17
  Escherichia coli ECRC101 OKFHMN_02160 dbpA ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli ECRC101 MCAODC_16095 dbpA ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli ECRC102 NIAGMN_26330 dbpA ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli ECRC62 BNILDI_18025 dbpA ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli ECRC98 JDDGAC_04720 dbpA ATP-dependent RNA helicase DbpA no data 29 17
  Escherichia coli ECRC99 KEDOAH_26595 dbpA ATP-dependent RNA helicase DbpA no data 29 17
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02338 ATP-dependent RNA helicase DbpA insig. 29 17
  Escherichia coli Nissle 1917 ECOLIN_RS08060 ATP-dependent RNA helicase DbpA no data 29 17
  Escherichia coli BW25113 b1343 dbpA ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) insig. 29 17
  Enterobacter sp. TBS_079 MPMX20_02441 ATP-dependent RNA helicase DbpA insig. 29 16
  Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 28 17
  Rhodanobacter denitrificans MT42 LRK55_RS09695 ATP-dependent RNA helicase DbpA insig. 28 17
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10055 ATP-dependent RNA helicase DbpA insig. 28 17
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 25 29
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_06050 ATP-dependent RNA helicase insig. 25 26
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 29 17
  Enterobacter asburiae PDN3 EX28DRAFT_1006 Superfamily II DNA and RNA helicases insig. 29 16
  Pectobacterium carotovorum WPP14 HER17_RS05765 ATP-dependent RNA helicase SrmB cofit 34 13
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 30 17
  Variovorax sp. SCN45 GFF6779 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) insig. 27 22
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17040 DNA helicase RecQ cofit 27 32
  Rhodanobacter sp. FW510-T8 OKGIIK_13010 hepA ATP-dependent helicase cofit 22 60
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 32 15
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 32 15
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 32 15
  Shewanella loihica PV-4 Shew_2800 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 29 18
  Alteromonas macleodii MIT1002 MIT1002_01999 ATP-dependent RNA helicase SrmB no data 29 14
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2649 ATP-dependent 23S rRNA helicase DbpA insig. 27 19
  Rahnella sp. WP5 EX31_RS24740 ATP-dependent RNA helicase DbpA insig. 26 18
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS10540 DEAD/DEAH box helicase insig. 25 15
  Rhodanobacter sp. FW510-T8 OKGIIK_16320 dbpA ATP-dependent RNA helicase DbpA insig. 28 17
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 30 18
  Escherichia coli ECOR38 HEPCGN_26000 dbpA ATP-dependent RNA helicase DbpA insig. 29 17
  Pseudomonas fluorescens SBW25 PFLU_RS28020 ATP-dependent RNA helicase DbpA insig. 33 16
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28020 ATP-dependent RNA helicase DbpA strong 33 16
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 27 20
  Pectobacterium carotovorum WPP14 HER17_RS13325 ATP-dependent RNA helicase RhlE insig. 23 31