Homologs of LRK54_RS16935 from Rhodanobacter denitrificans FW104-10B01

bifunctional diguanylate cyclase/phosphodiesterase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_07905 Diguanylate cyclase insig. 91 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 69 98
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 51
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 56
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 45 55
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 45 51
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 51
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 50
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 45 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4868 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS02090 EAL domain-containing protein insig. 49 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 46 49
  Burkholderia phytofirmans PsJN BPHYT_RS03250 diguanylate cyclase insig. 48 51
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 39 64
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 46 49
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 46 49
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 46 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 46 49
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 44 54
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 46 49
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 45 52
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 49 50
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 46 49
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 46 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 46 49
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 45 49
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 45 49
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 45 49
  Pseudomonas fluorescens FW300-N2C3 AO356_24220 diguanylate cyclase insig. 47 49
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 46 49
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 45 49
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 46 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 43 52
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 44 50
  Cupriavidus basilensis FW507-4G11 RR42_RS09980 diguanylate phosphodiesterase insig. 45 49
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 44 51
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 45 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 49
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 47 48
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 45 50
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 49
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 44 49
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 44 50
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 45 50
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 44 51
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 52
  Dechlorosoma suillum PS Dsui_3334 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 51
  Magnetospirillum magneticum AMB-1 AMB_RS13545 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 50
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 52
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 44 50
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 42 50
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 44 50
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 44 52
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 44 50
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 43 50
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 57
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 45 50
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 45 50
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 44 49
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 47 50
  Dechlorosoma suillum PS Dsui_2032 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 53
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 46 50
  Ralstonia solanacearum GMI1000 RS_RS22695 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 56
  Cupriavidus basilensis FW507-4G11 RR42_RS00130 diguanylate cyclase insig. 41 54
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 44 52
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 44 52
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 48
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 42 51
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 45 51
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 43 49
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 43 51
  Shewanella amazonensis SB2B Sama_2405 sensory box protein (RefSeq) insig. 42 52
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 45 50
  Rhodospirillum rubrum S1H Rru_A0558 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) insig. 44 49
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 44 49
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 43 51
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 43 51
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 51
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 42 51
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 45 48
  Dechlorosoma suillum PS Dsui_2394 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 45 51
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 43 51
  Synechococcus elongatus PCC 7942 Synpcc7942_1355 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 48
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 50
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18290 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 53
  Ralstonia solanacearum UW163 UW163_RS20840 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 53
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 43 52
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 45 50
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 43 49
  Pseudomonas fluorescens SBW25 PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 41 49
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05520 GGDEF and EAL domain-containing protein insig. 41 49
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 39 52
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 50
  Shewanella sp. ANA-3 Shewana3_1161 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 40 53
  Pseudomonas stutzeri RCH2 Psest_2562 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 44 49
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 43 51
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 45 48