Homologs of LRK53_RS08000 from Rhodanobacter sp000427505 FW510-R12

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08000 diguanylate cyclase insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS01820 diguanylate cyclase insig. 90 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02045 GGDEF domain-containing protein insig. 90 97
o Rhodanobacter sp. FW510-T8 OKGIIK_09110 Diguanylate cyclase insig. 84 94
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07510 diguanylate cyclase insig. 57 92
  Lysobacter sp. OAE881 ABIE51_RS13470 GGDEF domain-containing protein insig. 34 44
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 27 83
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 29 65
  Pseudomonas aeruginosa PA14 IKLFDK_14585 GGDEF domain-containing protein insig. 49 27
  Pseudomonas aeruginosa MRSN321 DY961_RS02640 GGDEF domain-containing protein insig. 49 27
  Pseudomonas aeruginosa PUPa3 DQ20_RS32955 GGDEF domain-containing protein insig. 49 27
  Shewanella amazonensis SB2B Sama_2871 response regulator (RefSeq) insig. 31 64
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 40 34
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 44 27
  Pseudomonas sp. S08-1 OH686_21285 hypothetical protein cofit 29 61
  Pseudomonas sp. BP01 JOY50_RS14585 sensor domain-containing diguanylate cyclase insig. 44 27
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 25 86
  Pseudomonas sp. SVBP6 COO64_RS08545 diguanylate cyclase insig. 41 34
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 39 29
  Lysobacter sp. OAE881 ABIE51_RS13340 diguanylate cyclase insig. 28 70
  Pseudomonas sp. S08-1 OH686_13445 hypothetical protein insig. 29 71
  Shewanella amazonensis SB2B Sama_2970 diguanylate cyclase (RefSeq) insig. 29 61
  Klebsiella michiganensis M5al BWI76_RS04055 GGDEF domain-containing protein cofit 31 52
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 26 85
  Pseudomonas sp. DMC3 GFF2253 hypothetical protein insig. 43 27
  Herbaspirillum seropedicae SmR1 HSERO_RS22490 diguanylate cyclase sig. 45 27
  Pseudomonas aeruginosa PA14 IKLFDK_24010 diguanylate cyclase sig. 39 34
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 44 28
  Pseudomonas sp. SVBP6 COO64_RS16430 sensor domain-containing diguanylate cyclase insig. 41 29
  Pseudomonas segetis P6 ACVTMO_RS13215 GGDEF domain-containing protein insig. 42 29
  Rhodospirillum rubrum S1H Rru_A1272 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 39 32
  Pseudomonas aeruginosa MRSN321 DY961_RS21395 sensor domain-containing diguanylate cyclase insig. 39 34
  Pseudomonas aeruginosa PUPa3 DQ20_RS37895 sensor domain-containing diguanylate cyclase insig. 39 34
  Klebsiella michiganensis M5al BWI76_RS18395 diguanylate cyclase insig. 44 27
  Serratia liquefaciens MT49 IAI46_12920 diguanylate cyclase insig. 42 31
  Acidovorax sp. GW101-3H11 Ac3H11_3356 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 26
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 42 29
  Rhodospirillum rubrum S1H Rru_A2594 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 41 31
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 38 34
  Herbaspirillum seropedicae SmR1 HSERO_RS11275 membrane protein insig. 43 29
  Ralstonia sp. UNC404CL21Col ABZR87_RS21625 GGDEF domain-containing protein insig. 44 28
  Shewanella oneidensis MR-1 SO4425 GGDEF family protein (NCBI ptt file) insig. 40 28
  Klebsiella pneumoniae MKP103 KDGMDA_25665 cellulose biosynthesis regulator YedQ insig. 42 27
  Pseudomonas sp. BP01 JOY50_RS18500 sensor domain-containing diguanylate cyclase insig. 39 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4001 FIG00638997: hypothetical protein insig. 43 27
  Shewanella amazonensis SB2B Sama_3537 GGDEF family protein (RefSeq) insig. 40 29
  Pseudomonas orientalis W4I3 QF045_RS03980 sensor domain-containing diguanylate cyclase cofit 38 34
  Kangiella aquimarina DSM 16071 B158DRAFT_0309 diguanylate cyclase (GGDEF) domain insig. 40 28
  Bosea sp. OAE506 ABIE41_RS12885 GGDEF domain-containing protein insig. 45 28
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 43 31
  Pseudomonas sp. S08-1 OH686_17790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 27
  Klebsiella pneumoniae MKP103 KDGMDA_12325 GGDEF domain-containing protein insig. 40 30
  Acinetobacter radioresistens SK82 MPMX26_02261 hypothetical protein no data 39 27
  Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 37 34
  Pseudomonas sp. S08-1 OH686_16635 hypothetical protein insig. 35 44
  Pseudomonas aeruginosa MRSN321 DY961_RS24835 GGDEF domain-containing protein insig. 44 28
  Pseudomonas aeruginosa PUPa3 DQ20_RS57285 GGDEF domain-containing protein cofit 44 28
  Pseudomonas sp. BP01 JOY50_RS03920 GGDEF domain-containing protein insig. 40 31
  Pseudomonas sp. DMC3 GFF4411 hypothetical protein insig. 39 38
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08120 GGDEF domain-containing protein cofit 38 37
  Pseudomonas sp. DMC3 GFF4253 hypothetical protein insig. 37 34
  Enterobacter sp. TBS_079 MPMX20_00664 hypothetical protein insig. 39 29
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 37 34
  Pseudomonas aeruginosa PA14 IKLFDK_02445 Diguanylate cyclase DgcM insig. 44 28
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 35 31
  Acidovorax sp. GW101-3H11 Ac3H11_4322 Bll3041 protein insig. 45 28
  Marinobacter adhaerens HP15 HP15_4000 GGDEF domain membrane protein insig. 42 29
  Marinobacter adhaerens HP15 HP15_850 GGDEF domain protein insig. 41 28
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1660 GGDEF domain protein insig. 40 38
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 38 37
  Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 38 34
  Rhodanobacter denitrificans MT42 LRK55_RS13850 GGDEF domain-containing protein insig. 42 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14130 GGDEF domain-containing protein insig. 42 32
  Shewanella amazonensis SB2B Sama_1759 GGDEF domain-containing protein (RefSeq) insig. 39 29
  Cupriavidus basilensis FW507-4G11 RR42_RS09990 DeoR family transcriptional regulator insig. 43 27
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 43 28
  Enterobacter asburiae PDN3 EX28DRAFT_3573 diguanylate cyclase (GGDEF) domain insig. 40 29
  Rhodopseudomonas palustris CGA009 TX73_014345 GGDEF domain-containing protein insig. 39 31
  Pseudomonas putida KT2440 PP_3932 Diguanylate cyclase insig. 39 31
  Lysobacter sp. OAE881 ABIE51_RS04020 sensor domain-containing diguanylate cyclase insig. 45 29
  Pseudomonas sp. S08-1 OH686_18785 hypothetical protein insig. 44 28
  Kangiella aquimarina DSM 16071 B158DRAFT_0300 diguanylate cyclase (GGDEF) domain insig. 40 27
  Paraburkholderia graminis OAS925 ABIE53_006414 diguanylate cyclase (GGDEF)-like protein insig. 38 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 36 35
  Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 37 34
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 43 27
  Rhodanobacter sp. FW510-T8 OKGIIK_13465 gGDEF GGDEF domain-containing protein insig. 43 28
  Pseudomonas sp. S08-1 OH686_20675 hypothetical protein cofit 43 28
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 42 29
  Castellaniella sp019104865 MT123 ABCV34_RS10105 GGDEF domain-containing protein insig. 41 28
  Rhizobium sp. OAE497 ABIE40_RS02110 GGDEF domain-containing protein insig. 39 34
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 37 30
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 35 34
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 37 28
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 36 28
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 35 38
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 34 34
  Acidovorax sp. GW101-3H11 Ac3H11_1024 GGDEF/response regulator receiver domain protein insig. 42 28
  Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 41 26
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 41 28