Homologs of LRK53_RS04610 from Rhodanobacter sp000427505 FW510-R12

diguanylate cyclase
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04610 diguanylate cyclase insig. 100 100
o Rhodanobacter denitrificans MT42 LRK55_RS05170 diguanylate cyclase insig. 86 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS05395 diguanylate cyclase insig. 85 100
o Rhodanobacter sp. FW510-T8 OKGIIK_01410 Histidine kinase sig. 84 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18975 diguanylate cyclase insig. 65 99
o Xanthobacter sp. DMC5 GFF1845 Regulator of RpoS insig. 59 99
  Magnetospirillum magneticum AMB-1 AMB_RS19635 hybrid sensor histidine kinase/response regulator insig. 54 50
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 53 55
  Lysobacter sp. OAE881 ABIE51_RS13765 EAL domain-containing protein sig. 46 63
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 49 55
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 53 53
  Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 45 61
  Azospirillum sp. SherDot2 MPMX19_02025 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 34 98
  Magnetospirillum magneticum AMB-1 AMB_RS11375 GGDEF domain-containing protein insig. 49 55
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 41 70
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 49 55
  Shewanella amazonensis SB2B Sama_0065 response regulator receiver protein (RefSeq) insig. 35 98
  Shewanella oneidensis MR-1 SO4324 GGDEF domain protein (NCBI ptt file) insig. 46 59
  Acidovorax sp. GW101-3H11 Ac3H11_1630 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 51 51
  Shewanella sp. ANA-3 Shewana3_0375 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) insig. 47 59
  Shewanella sp. ANA-3 Shewana3_1952 diguanylate cyclase (RefSeq) insig. 46 56
  Caulobacter crescentus NA1000 CCNA_00900 CHASE4-family GGDEF/EAL protein insig. 48 55
  Caulobacter crescentus NA1000 Δfur CCNA_00900 CHASE4-family GGDEF/EAL protein cofit 48 55
  Azospirillum brasilense Sp245 AZOBR_RS03050 diguanylate cyclase sig. 34 98
  Shewanella loihica PV-4 Shew_3790 response regulator receiver modulated diguanylate cyclase (RefSeq) insig. 35 98
  Magnetospirillum magneticum AMB-1 AMB_RS17220 GGDEF domain-containing protein insig. 51 54
  Shewanella amazonensis SB2B Sama_1844 extracellular solute-binding protein (RefSeq) cofit 48 56
  Kangiella aquimarina DSM 16071 B158DRAFT_2502 periplasmic sensor diguanylate cyclase/phosphodiesterase insig. 46 54
  Shewanella oneidensis MR-1 SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein (NCBI ptt file) insig. 46 56
  Magnetospirillum magneticum AMB-1 AMB_RS07755 PAS domain S-box protein insig. 45 57
  Shewanella sp. ANA-3 Shewana3_0544 response regulator receiver modulated diguanylate cyclase/phosphodiesterase (RefSeq) insig. 35 97
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 61
  Desulfovibrio vulgaris Miyazaki F DvMF_1530 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 48 54
  Shewanella oneidensis MR-1 SO0545 response regulator (NCBI ptt file) insig. 35 98
  Dechlorosoma suillum PS Dsui_2425 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 49 53
  Pseudomonas stutzeri RCH2 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 47 53
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 43 62
  Shewanella sp. ANA-3 Shewana3_4015 response regulator receiver modulated diguanylate cyclase (RefSeq) cofit 33 99
  Pseudomonas sp. SVBP6 COO64_RS02695 diguanylate cyclase domain-containing protein insig. 45 60
  Dechlorosoma suillum PS Dsui_2412 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 47 56
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 55
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 47 57
  Herbaspirillum seropedicae SmR1 HSERO_RS18880 diguanylate cyclase insig. 46 55
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 45 54
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 41 61
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 34 98
  Herbaspirillum seropedicae SmR1 HSERO_RS13970 diguanylate cyclase insig. 45 59
o Paraburkholderia sabiae LMG 24235 QEN71_RS31465 diguanylate cyclase insig. 34 98
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 43 59
  Shewanella sp. ANA-3 Shewana3_3543 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 45 54
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 43 59
  Kangiella aquimarina DSM 16071 B158DRAFT_0304 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 48 52
  Methylophilus sp. DMC18 GFF1876 hypothetical protein cofit 46 55
o Pseudomonas syringae pv. syringae B728a Psyr_2939 response regulator receiver modulated diguanylate cyclase no data 34 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2939 response regulator receiver modulated diguanylate cyclase no data 34 98
  Kangiella aquimarina DSM 16071 B158DRAFT_1581 diguanylate cyclase (GGDEF) domain insig. 44 54
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 50 55
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 49 54
  Pseudomonas stutzeri RCH2 Psest_2562 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 47 55
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 48 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU1190 sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 48 55
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 90
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 47 54
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 56
  Azospirillum brasilense Sp245 AZOBR_RS17635 hypothetical protein insig. 46 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 46 55
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 41 61
  Herbaspirillum seropedicae SmR1 HSERO_RS18655 response regulator insig. 32 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 48 53
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 44 57
  Rhodospirillum rubrum S1H Rru_A1805 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) cofit 45 55
  Synechocystis sp000284455 PCC 6803 SGL_RS12855 EAL domain-containing protein insig. 44 58
  Azospirillum brasilense Sp245 AZOBR_RS16180 diguanylate cyclase strong 32 99
  Variovorax sp. SCN45 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 59
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 45 55
  Methylophilus sp. DMC18 GFF1417 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 32 90
  Alteromonas macleodii MIT1002 MIT1002_00072 Bacteriophytochrome cph2 strong 43 61
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 46 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS16320 PAS domain-containing protein insig. 45 57
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 43 59
  Shewanella sp. ANA-3 Shewana3_0894 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 45 53
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 44 54
  Cupriavidus basilensis FW507-4G11 RR42_RS22465 membrane protein insig. 46 57
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 46 55
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18930 EAL domain-containing protein insig. 44 59
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 44 54
  Pseudomonas putida KT2440 PP_4670 diguanylate cyclase sig. 43 59
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1238 His Kinase A (phospho-acceptor) domain/Response regulator receiver domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase insig. 55 41
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1640 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 47 51
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 47 54
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 44 56
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 42 54
  Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 33 88
  Dechlorosoma suillum PS Dsui_2394 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 51 50
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 49 50
  Dechlorosoma suillum PS Dsui_0803 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 48 54
  Pseudomonas putida KT2440 PP_3711 diguanylate cyclase insig. 48 51
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 47 54
  Pseudomonas sp. BP01 JOY50_RS27620 diguanylate cyclase domain-containing protein insig. 43 59