Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Serratia liquefaciens MT49 | IAI46_02660 | | response regulator transcription factor | insig. | 100 | 100 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_02470 | | LuxR family transcriptional regulator | cofit | 33 | 97 |
o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3599 | | transcriptional regulator, LuxR family | insig. | 34 | 94 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_28335 | | LuxR family transcriptional regulator | insig. | 35 | 93 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4784 | | transcriptional regulator, LuxR family | sig. | 34 | 93 |
o | Sinorhizobium meliloti 1021 | SMc01630 | | transcriptional regulator | insig. | 34 | 86 |
| Pseudomonas putida KT2440 | PP_3847 | | Transcriptional regulator, LuxR family | insig. | 33 | 93 |
| Rhizobium sp. OAE497 | ABIE40_RS17320 | | helix-turn-helix transcriptional regulator | insig. | 38 | 71 |
o | Rhizobium sp. OAE497 | ABIE40_RS24325 | | LuxR C-terminal-related transcriptional regulator | insig. | 32 | 83 |
| Pseudomonas sp. RS175 | PFR28_02072 | | HTH-type transcriptional regulator MalT | insig. | 32 | 88 |
| Pseudomonas fluorescens SBW25 | PFLU_RS15355 | | helix-turn-helix transcriptional regulator | insig. | 31 | 95 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS15355 | | helix-turn-helix transcriptional regulator | insig. | 31 | 95 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS06975 | | helix-turn-helix transcriptional regulator | insig. | 32 | 94 |
| Pseudomonas simiae WCS417 | PS417_13435 | | LuxR family transcriptional regulator | insig. | 30 | 95 |
| Pseudomonas putida KT2440 | PP_2587 | | LuxR family transcriptional regulator | insig. | 30 | 95 |
| Serratia liquefaciens MT49 | IAI46_10135 | | helix-turn-helix transcriptional regulator | insig. | 30 | 92 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_24075 | | LuxR family transcriptional regulator | insig. | 31 | 88 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4249 | | transcriptional regulator, LuxR family | insig. | 32 | 94 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1483 | | transcriptional regulator, LuxR family | no data | 31 | 88 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30630 | | LuxR family transcriptional regulator | no data | 29 | 95 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2415 | | transcriptional regulator, LuxR family | insig. | 27 | 90 |
| Pseudomonas putida KT2440 | PP_3717 | | Transcriptional regulator, LuxR family | insig. | 30 | 82 |
| Sinorhizobium meliloti 1021 | SM_b20405 | | transcriptional regulator | insig. | 32 | 73 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_01935 | | DNA-binding response regulator | sig. | 52 | 24 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_07295 | | helix-turn-helix transcriptional regulator | insig. | 42 | 35 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1122 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 38 | 34 |
| Azospirillum brasilense Sp245 | AZOBR_RS22615 | | chemotaxis protein CheY | no data | 47 | 24 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21030 | | hypothetical protein | insig. | 46 | 28 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20940 | | hypothetical protein | insig. | 42 | 24 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS42420 | | response regulator transcription factor | insig. | 47 | 26 |
| Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 46 | 26 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 46 | 26 |
| Pseudomonas stutzeri RCH2 | Psest_2048 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 50 | 21 |
| Shewanella sp. ANA-3 | Shewana3_0637 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 47 | 23 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1879 | | ATP-dependent transcriptional regulator, MalT-like, LuxR family (RefSeq) | insig. | 42 | 26 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 51 | 21 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06370 | | DNA-binding response regulator | cofit | 52 | 20 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 52 | 21 |
| Paraburkholderia graminis OAS925 | ABIE53_004144 | | DNA-binding NarL/FixJ family response regulator | sig. | 51 | 21 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0520 | | transcriptional regulator (NCBI ptt file) | no data | 34 | 40 |
| Burkholderia phytofirmans PsJN | BPHYT_RS22230 | | LuxR family transcriptional regulator | sig. | 52 | 21 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS32890 | | response regulator transcription factor | insig. | 51 | 21 |
| Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 49 | 21 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0505 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 49 | 22 |
| Alteromonas macleodii MIT1002 | MIT1002_03526 | | Nitrogen regulation protein C | insig. | 49 | 22 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS04230 | | LuxR family transcriptional regulator | strong | 46 | 25 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1205 | | Two-component response regulator | strong | 45 | 22 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5287 | | Transcriptional regulator, LuxR family | insig. | 43 | 27 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_16800 | | LuxR family transcriptional regulator | insig. | 54 | 18 |
| Pseudomonas putida KT2440 | PP_0767 | | Transcriptional regulator, LuxR family | strong | 53 | 18 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3241 | | Transcriptional regulator, LuxR family | strong | 41 | 26 |
| Pseudomonas sp. RS175 | PFR28_00219 | | HTH-type transcriptional regulator MalT | insig. | 45 | 26 |
| Pseudomonas fluorescens SBW25 | PFLU_RS04600 | | LuxR family transcriptional regulator | insig. | 44 | 23 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS04600 | | LuxR family transcriptional regulator | strong | 44 | 23 |
| Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 43 | 23 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2537 | | Two-component response regulator | strong | 42 | 22 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_06895 | | LuxR family transcriptional regulator | insig. | 51 | 18 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4965 | | Transcriptional regulator, LuxR family | insig. | 45 | 29 |
| Sinorhizobium meliloti 1021 | SM_b20078 | | response regulator | insig. | 45 | 31 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2181 | | transcriptional regulator (NCBI ptt file) | insig. | 42 | 24 |
| Pseudomonas simiae WCS417 | PS417_04555 | | LuxR family transcriptional regulator | insig. | 44 | 23 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21285 | | DNA-binding response regulator | insig. | 45 | 25 |
| Azospirillum brasilense Sp245 | AZOBR_RS23775 | | LuxR family transcriptional regulator | no data | 43 | 22 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03162 | | transcriptional regulator, LuxR family | insig. | 42 | 24 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS10115 | | helix-turn-helix transcriptional regulator | insig. | 35 | 33 |
| Variovorax sp. SCN45 | GFF4673 | | hypothetical protein | insig. | 22 | 96 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10510 | | alpha/beta fold hydrolase | insig. | 54 | 20 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2030 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 47 | 21 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 47 | 21 |
| Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 47 | 21 |
| Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 47 | 21 |
| Ralstonia solanacearum PSI07 | RPSI07_RS15805 | | DNA-binding response regulator | no data | 44 | 23 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2961 | | Transcriptional regulator, LuxR family | sig. | 44 | 25 |
| Pectobacterium carotovorum WPP14 | HER17_RS14245 | | response regulator transcription factor | insig. | 48 | 22 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1129 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 47 | 20 |
| Pseudomonas sp. S08-1 | OH686_06310 | | Transcriptional regulator, LuxR family | cofit | 43 | 27 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15535 | | response regulator | no data | 37 | 27 |
| Pseudomonas sp. RS175 | PFR28_03617 | | HTH-type transcriptional regulator MalT | sig. | 51 | 18 |
| Serratia liquefaciens MT49 | IAI46_02690 | | helix-turn-helix transcriptional regulator | insig. | 44 | 21 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS36380 | | LuxR family transcriptional regulator | insig. | 43 | 23 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS17695 | | helix-turn-helix transcriptional regulator | insig. | 36 | 35 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS09785 | | LuxR family transcriptional regulator | sig. | 50 | 22 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS13415 | | LuxR C-terminal-related transcriptional regulator | insig. | 47 | 20 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1622 | | Transcriptional regulator, LuxR family | insig. | 44 | 25 |
| Variovorax sp. OAS795 | ABID97_RS24215 | | response regulator transcription factor | insig. | 42 | 22 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_15025 | | LuxR family transcriptional regulator | insig. | 49 | 18 |
| Pseudomonas simiae WCS417 | PS417_23420 | | LuxR family transcriptional regulator | insig. | 47 | 24 |
| Variovorax sp. SCN45 | GFF5975 | | Two-component transcriptional response regulator, LuxR family | insig. | 39 | 27 |
| Pseudomonas fluorescens SBW25 | PFLU_RS25250 | | helix-turn-helix transcriptional regulator | cofit | 48 | 24 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS25250 | | helix-turn-helix transcriptional regulator | insig. | 48 | 24 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS08305 | | DNA-binding response regulator | insig. | 46 | 21 |
| Serratia liquefaciens MT49 | IAI46_04860 | | response regulator transcription factor | sig. | 45 | 22 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | insig. | 44 | 24 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3079 | | Putative response regulator | insig. | 43 | 21 |
| Mycobacterium tuberculosis H37Rv | Rv0890c | | Probable transcriptional regulatory protein (probably LuxR-family) | insig. | 42 | 21 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS24135 | | DNA-binding response regulator | insig. | 38 | 30 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03794 | | transcriptional regulator, LuxR family | sig. | 36 | 38 |
| Sinorhizobium meliloti 1021 | SM_b20468 | | sensory transduction DNA-binding response regulator protein | insig. | 52 | 21 |
| Dechlorosoma suillum PS | Dsui_3160 | | response regulator | strong | 44 | 25 |
| Pseudomonas stutzeri RCH2 | Psest_1124 | | ATP-dependent transcriptional regulator | sig. | 40 | 28 |