Homologs of HSERO_RS22065 from Herbaspirillum seropedicae SmR1

EpiA
SEED: GDP-L-fucose synthetase (EC 1.1.1.271)
KEGG: GDP-L-fucose synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS22065 EpiA sig. 100 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS26355 GDP-L-fucose synthase insig. 54 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04777 GDP-L-fucose synthase insig. 51 99
o Paraburkholderia graminis OAS925 ABIE53_000941 GDP-L-fucose synthase sig. 52 98
o Azospirillum brasilense Sp245 AZOBR_RS03370 GDP-L-fucose synthase insig. 54 97
o Burkholderia phytofirmans PsJN BPHYT_RS04005 GDP-L-fucose synthase strong 51 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU0090 wcaG GDP-fucose synthetase (TIGR) no data 51 99
o Escherichia coli Nissle 1917 ECOLIN_RS12090 GDP-L-fucose synthase no data 50 96
o Escherichia fergusonii Becca EFB2_01802 GDP-L-fucose synthase insig. 50 96
o Escherichia coli ECOR27 NOLOHH_15680 fcl GDP-L-fucose synthase cofit 50 96
o Escherichia coli ECRC101 OKFHMN_24350 fcl GDP-L-fucose synthase insig. 50 96
o Escherichia coli ECRC101 MCAODC_20590 fcl GDP-L-fucose synthase insig. 50 96
o Escherichia coli ECRC102 NIAGMN_22295 fcl GDP-L-fucose synthase insig. 50 96
o Escherichia coli ECRC98 JDDGAC_28460 fcl GDP-L-fucose synthase no data 50 96
o Escherichia coli ECRC99 KEDOAH_03800 fcl GDP-L-fucose synthase no data 50 96
o Escherichia coli BL21 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase insig. 50 96
o Escherichia coli ECRC62 BNILDI_14590 fcl GDP-L-fucose synthase insig. 50 96
o Escherichia coli BW25113 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) sig. 50 96
o Escherichia coli ECOR38 HEPCGN_03050 fcl GDP-L-fucose synthase cofit 50 96
o Enterobacter sp. TBS_079 MPMX20_03034 GDP-L-fucose synthase sig. 51 96
o Enterobacter asburiae PDN3 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases insig. 50 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05195 GDP-fucose synthetase strong 50 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 51 96
  Escherichia coli ECRC101 OKFHMN_24445 wcaG GDP-fucose synthetase insig. 48 96
  Escherichia coli ECRC101 MCAODC_20495 wcaG GDP-fucose synthetase no data 48 96
  Escherichia coli ECRC102 NIAGMN_22390 wcaG GDP-fucose synthetase no data 48 96
  Escherichia coli ECRC98 JDDGAC_28555 wcaG GDP-fucose synthetase no data 48 96
  Escherichia coli ECRC99 KEDOAH_03705 wcaG GDP-fucose synthetase no data 48 96
o Azospirillum sp. SherDot2 MPMX19_05629 GDP-L-fucose synthase insig. 51 98
o Cupriavidus basilensis FW507-4G11 RR42_RS34460 GDP-L-fucose synthase sig. 50 97
o Synechococcus elongatus PCC 7942 Synpcc7942_1700 wcaG GDP-fucose synthetase NAD dependent epimerase/dehydratase no data 51 98
o Dinoroseobacter shibae DFL-12 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) strong 50 97
o Castellaniella sp019104865 MT123 ABCV34_RS12930 GDP-L-fucose synthase no data 47 97
o Dechlorosoma suillum PS Dsui_0086 nucleoside-diphosphate-sugar epimerase strong 49 97
o Pseudomonas fluorescens SBW25 PFLU_RS17885 GDP-L-fucose synthase insig. 50 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17885 GDP-L-fucose synthase sig. 50 96
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17480 GDP-L-fucose synthase no data 48 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) strong 47 98
  Cupriavidus basilensis FW507-4G11 RR42_RS33240 GDP-L-fucose synthase strong 48 96
o Pseudomonas stutzeri RCH2 Psest_1819 Nucleoside-diphosphate-sugar epimerases strong 48 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19675 GDP-fucose synthetase insig. 47 96
o Phaeobacter inhibens DSM 17395 PGA1_65p00300 GDP-L-fucose synthetase Fcl no data 50 98
o Magnetospirillum magneticum AMB-1 AMB_RS04085 GDP-L-fucose synthase cofit 50 96
  Cupriavidus basilensis FW507-4G11 RR42_RS21005 GDP-L-fucose synthase insig. 50 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF53 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 49 95
o Pectobacterium carotovorum WPP14 HER17_RS14535 GDP-L-fucose synthase cofit 46 96
o Rhodanobacter denitrificans MT42 LRK55_RS03655 GDP-L-fucose synthase strong 50 93
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS03850 GDP-L-fucose synthase insig. 46 98
o Desulfovibrio vulgaris Miyazaki F DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) strong 47 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2555 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 47 96
  Azospirillum sp. SherDot2 MPMX19_06659 GDP-L-fucose synthase insig. 50 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19205 GDP-fucose synthetase insig. 45 96
  Magnetospirillum magneticum AMB-1 AMB_RS00820 GDP-L-fucose synthase cofit 48 96
o Mycobacterium tuberculosis H37Rv Rv1512 Probable nucleotide-sugar epimerase EpiA insig. 47 97
  Azospirillum sp. SherDot2 MPMX19_06634 GDP-L-fucose synthase cofit 47 96
o Variovorax sp. OAS795 ABID97_RS19130 GDP-L-fucose synthase insig. 48 95
o Rhodospirillum rubrum S1H Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) insig. 47 96
o Agrobacterium fabrum C58 Atu4790 GDP-fucose synthetase insig. 44 97
o Caulobacter crescentus NA1000 CCNA_00471 GDP-L-fucose synthase strong 45 98
o Caulobacter crescentus NA1000 Δfur CCNA_00471 GDP-L-fucose synthase cofit 45 98
o Bacteroides stercoris CC31F HMPREF1181_RS12535 GDP-L-fucose synthase strong 40 98
o Variovorax sp. SCN45 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 47 93
o Bacteroides thetaiotaomicron VPI-5482 BT1225 GDP-fucose synthetase (NCBI ptt file) no data 40 97
o Bacteroides ovatus ATCC 8483 BACOVA_00512 NAD dependent epimerase/dehydratase family protein no data 40 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17275 GDP-L-fucose synthase sig. 39 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00180 GDP-L-fucose synthase strong 39 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06610 GDP-L-fucose synthase strong 39 97
o Phocaeicola dorei CL03T12C01 ABI39_RS13275 GDP-L-fucose synthase insig. 39 98
  Phocaeicola dorei CL03T12C01 ABI39_RS20405 GDP-L-fucose synthase strong 39 97
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4397 Nucleoside-diphosphate-sugar epimerases strong 34 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13020 NAD-dependent epimerase/dehydratase family protein strong 35 95
o Dickeya dadantii 3937 DDA3937_RS18680 GDP-L-fucose synthase strong 29 97
o Dickeya dianthicola 67-19 HGI48_RS18610 GDP-L-fucose synthase cofit 28 97
o Dickeya dianthicola ME23 DZA65_RS19745 GDP-L-fucose synthase strong 28 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2369 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 31 83
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2372 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 30 90
  Lysobacter sp. OAE881 ABIE51_RS07420 UDP-glucuronic acid decarboxylase family protein insig. 29 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS29120 SDR family oxidoreductase cofit 27 95
  Sinorhizobium meliloti 1021 SM_b21052 epimerase dehydratase insig. 28 93
  Dinoroseobacter shibae DFL-12 Dshi_4115 dTDP-glucose 4,6-dehydratase (RefSeq) strong 25 97
  Shewanella loihica PV-4 Shew_1401 dTDP-glucose 4,6 dehydratase (RefSeq) strong 24 97
  Caulobacter crescentus NA1000 CCNA_00090 UDP-glucose 4-epimerase cofit 26 95
  Caulobacter crescentus NA1000 Δfur CCNA_00090 UDP-glucose 4-epimerase cofit 26 95
  Phaeobacter inhibens DSM 17395 PGA1_65p00240 dTDP-glucose 4,6-dehydratase RffG sig. 25 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13405 NAD-dependent dehydratase strong 27 95
  Phocaeicola dorei CL03T12C01 ABI39_RS14815 NAD-dependent epimerase insig. 27 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18480 NAD-dependent epimerase insig. 27 86
  Caulobacter crescentus NA1000 CCNA_02466 UDP-glucose 4-epimerase sig. 25 95
  Caulobacter crescentus NA1000 Δfur CCNA_02466 UDP-glucose 4-epimerase cofit 25 95
  Rhizobium sp. OAE497 ABIE40_RS02610 NAD-dependent epimerase/dehydratase family protein insig. 28 81
  Desulfovibrio vulgaris Hildenborough JW710 DVU2455 NAD-dependent epimerase/dehydratase family protein (TIGR) insig. 27 95
  Acinetobacter radioresistens SK82 MPMX26_00066 UDP-glucose 4-epimerase cofit 24 97
  Magnetospirillum magneticum AMB-1 AMB_RS00390 NAD-dependent dehydratase no data 28 73
  Shewanella loihica PV-4 Shew_2285 UDP-glucose 4-epimerase (RefSeq) cofit 25 99
  Sinorhizobium meliloti 1021 SM_b20458 dTDP-glucose 4,6-dehydratase insig. 27 95
  Agrobacterium fabrum C58 Atu4166 UDP-glucose 4-epimerase strong 25 97
  Mycobacterium tuberculosis H37Rv Rv3784 Possible dTDP-glucose 4,6-dehydratase insig. 26 95
  Desulfovibrio vulgaris Hildenborough JW710 DVU1360 galE UDP-glucose 4-epimerase (TIGR) insig. 26 97
  Rhodospirillum rubrum S1H Rru_B0050 dTDP-glucose 4,6-dehydratase (NCBI) insig. 25 97
  Castellaniella sp019104865 MT123 ABCV34_RS02410 dTDP-glucose 4,6-dehydratase no data 25 96