Homologs of HSERO_RS08725 from Herbaspirillum seropedicae SmR1

transcriptional regulator
SEED: Transcriptional regulator, RpiR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS08725 transcriptional regulator sig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS28850 transcriptional regulator insig. 66 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19110 MurR/RpiR family transcriptional regulator sig. 62 100
o Ralstonia solanacearum PSI07 RPSI07_RS05455 MurR/RpiR family transcriptional regulator insig. 61 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18180 MurR/RpiR family transcriptional regulator insig. 61 100
o Ralstonia solanacearum UW163 UW163_RS20950 MurR/RpiR family transcriptional regulator insig. 61 100
o Ralstonia solanacearum GMI1000 RS_RS22855 MurR/RpiR family transcriptional regulator insig. 61 100
o Burkholderia phytofirmans PsJN BPHYT_RS03120 transcriptional regulator insig. 58 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS01955 MurR/RpiR family transcriptional regulator cofit 58 99
o Paraburkholderia graminis OAS925 ABIE53_000756 RpiR family carbohydrate utilization transcriptional regulator sig. 58 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01892 transcriptional regulator, RpiR family insig. 57 99
o Serratia liquefaciens MT49 IAI46_02300 MurR/RpiR family transcriptional regulator insig. 47 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5134 Transcriptional regulator, RpiR family insig. 47 99
o Klebsiella michiganensis M5al BWI76_RS03915 MurR/RpiR family transcriptional regulator insig. 48 100
o Pseudomonas fluorescens FW300-N2E3 AO353_05895 RpiR family transcriptional regulator insig. 46 99
o Pseudomonas syringae pv. syringae B728a Psyr_0416 transcriptional regulator, RpiR family insig. 46 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0416 transcriptional regulator, RpiR family insig. 46 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3440 Transcriptional regulator, RpiR family sig. 43 99
o Pseudomonas sp. RS175 PFR28_00029 HTH-type transcriptional regulator HexR insig. 44 99
o Pseudomonas fluorescens FW300-N2C3 AO356_07785 RpiR family transcriptional regulator insig. 43 99
o Pseudomonas fluorescens SBW25 PFLU_RS25415 MurR/RpiR family transcriptional regulator insig. 45 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25415 MurR/RpiR family transcriptional regulator insig. 45 99
o Pseudomonas simiae WCS417 PS417_23600 RpiR family transcriptional regulator insig. 45 99
o Rhizobium sp. OAE497 ABIE40_RS21410 MurR/RpiR family transcriptional regulator insig. 38 99
o Sinorhizobium meliloti 1021 SM_b21158 transcriptional regulator sig. 37 99
o Agrobacterium fabrum C58 Atu2598 transcriptional regulator, RpiR family strong 36 99
  Azospirillum brasilense Sp245 AZOBR_RS30190 transcriptional regulator insig. 34 94
  Marinobacter adhaerens HP15 HP15_2180 transcriptional regulator, RpiR family protein strong 34 95
  Azospirillum sp. SherDot2 MPMX19_04844 HTH-type transcriptional regulator HexR insig. 34 94
  Pseudomonas fluorescens FW300-N2E3 AO353_03365 transcriptional regulator strong 31 100
  Pseudomonas stutzeri RCH2 Psest_0851 Transcriptional regulators strong 31 98
  Pseudomonas fluorescens FW300-N2C3 AO356_05165 transcriptional regulator strong 31 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family strong 31 100
  Azospirillum sp. SherDot2 MPMX19_06075 HTH-type transcriptional regulator HexR no data 37 90
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family sig. 31 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family strong 31 100
  Paraburkholderia graminis OAS925 ABIE53_004499 RpiR family carbohydrate utilization transcriptional regulator sig. 34 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03750 transcriptional regulator, RpiR family insig. 33 94
  Pseudomonas sp. RS175 PFR28_00572 HTH-type transcriptional regulator HexR strong 31 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS15880 MurR/RpiR family transcriptional regulator insig. 34 97
  Pseudomonas simiae WCS417 PS417_22115 transcriptional regulator strong 31 100
  Pseudomonas fluorescens SBW25 PFLU_RS23730 MurR/RpiR family transcriptional regulator strong 31 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23730 MurR/RpiR family transcriptional regulator strong 31 100
  Serratia liquefaciens MT49 IAI46_09240 SIS domain-containing protein insig. 35 77
  Burkholderia phytofirmans PsJN BPHYT_RS35685 RpiR family transcriptional regulator no data 33 94
  Pseudomonas sp. S08-1 OH686_02440 Phosphogluconate repressor HexR, RpiR family strong 31 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_05825 transcriptional regulator HexR cofit 29 95
  Burkholderia phytofirmans PsJN BPHYT_RS16740 transcriptional regulator strong 33 93
  Pseudomonas putida KT2440 PP_1021 DNA-binding transcriptional regulator strong 31 95
  Cupriavidus basilensis FW507-4G11 RR42_RS06120 transcriptional regulator sig. 33 93
  Acidovorax sp. GW101-3H11 Ac3H11_692 transcriptional regulator, RpiR family insig. 31 94
  Paraburkholderia graminis OAS925 ABIE53_003518 RpiR family carbohydrate utilization transcriptional regulator strong 33 96
  Shewanella sp. ANA-3 Shewana3_2152 DNA-binding transcriptional regulator HexR (RefSeq) strong 28 96
  Alteromonas macleodii MIT1002 MIT1002_02408 putative HTH-type transcriptional regulator YbbH no data 28 95
  Pseudomonas syringae pv. syringae B728a Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) strong 30 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) insig. 30 96
  Shewanella oneidensis MR-1 SO2490 transcriptional regulator, RpiR family (NCBI ptt file) strong 28 96
  Pseudomonas sp. S08-1 OH686_13095 Transcriptional regulator, RpiR family cofit 30 96
  Klebsiella michiganensis M5al BWI76_RS18110 transcriptional regulator HexR sig. 30 97
  Sinorhizobium meliloti 1021 SMc02460 hypothetical protein strong 31 87
  Pseudomonas stutzeri RCH2 Psest_4088 Transcriptional regulators strong 30 95
  Pseudomonas putida KT2440 PP_5350 Transcriptional regulator, RpiR family strong 30 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2008 Phosphogluconate repressor HexR, RpiR family strong 30 95
  Escherichia fergusonii Becca EFB2_02089 HTH-type transcriptional regulator HexR insig. 30 95
  Escherichia coli Nissle 1917 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR cofit 30 95
  Escherichia coli ECOR27 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR cofit 30 95
  Escherichia coli ECOR38 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR cofit 30 95
  Escherichia coli ECRC101 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR insig. 30 95
  Escherichia coli ECRC101 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR sig. 30 95
  Escherichia coli ECRC102 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR insig. 30 95
  Escherichia coli ECRC62 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR insig. 30 95
  Escherichia coli ECRC98 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR no data 30 95
  Escherichia coli ECRC99 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR no data 30 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00163 glucokinase /transcriptional regulator, RpiR family strong 34 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_726 Phosphogluconate repressor HexR, RpiR family strong 30 95
  Pseudomonas fluorescens FW300-N2E3 AO353_10040 transcriptional regulator strong 30 95
  Enterobacter sp. TBS_079 MPMX20_02758 HTH-type transcriptional regulator HexR strong 29 97
  Pantoea sp. MT58 IAI47_08490 MurR/RpiR family transcriptional regulator insig. 31 95
  Pseudomonas syringae pv. syringae B728a Psyr_5064 transcriptional regulator, RpiR family insig. 30 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5064 transcriptional regulator, RpiR family insig. 30 93
  Escherichia coli BL21 ECD_01824 putative DNA-binding transcriptional regulator cofit 30 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01875 HTH-type transcriptional regulator HexR insig. 30 95
  Escherichia coli BW25113 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) strong 30 95
  Shewanella loihica PV-4 Shew_2049 DNA-binding transcriptional regulator HexR (RefSeq) strong 29 95
  Pectobacterium carotovorum WPP14 HER17_RS11785 MurR/RpiR family transcriptional regulator cofit 29 96
  Pseudomonas fluorescens FW300-N2C3 AO356_12005 transcriptional regulator strong 30 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4276 Phosphogluconate repressor HexR, RpiR family strong 30 95
  Enterobacter asburiae PDN3 EX28DRAFT_0703 transcriptional regulator, RpiR family insig. 29 97
  Burkholderia phytofirmans PsJN BPHYT_RS05010 RpiR family transcriptional regulator strong 33 87
  Paraburkholderia graminis OAS925 ABIE53_001273 glucokinase strong 33 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS03320 bifunctional transcriptional regulator/glucokinase strong 33 90
  Dickeya dadantii 3937 DDA3937_RS10130 MurR/RpiR family transcriptional regulator cofit 30 95
  Pseudomonas sp. RS175 PFR28_04521 HTH-type transcriptional regulator HexR strong 29 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1632 Phosphogluconate repressor HexR, RpiR family insig. 29 97
  Shewanella amazonensis SB2B Sama_1813 DNA-binding transcriptional regulator HexR (RefSeq) strong 27 96
  Ralstonia solanacearum GMI1000 RS_RS24600 MurR/RpiR family transcriptional regulator insig. 36 89
  Pseudomonas fluorescens SBW25 PFLU_RS29890 transcriptional regulator HexR strong 29 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29890 transcriptional regulator HexR strong 29 95
  Pseudomonas simiae WCS417 PS417_28230 transcriptional regulator strong 29 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04279 transcriptional regulator, RpiR family sig. 32 96