Homologs of HSERO_RS02425 from Herbaspirillum seropedicae SmR1

transcriptional activator
SEED: Transcriptional activator RfaH
KEGG: transcriptional antiterminator RfaH

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS02425 transcriptional activator strong 100 100
o Pseudomonas stutzeri RCH2 Psest_2605 transcriptional activator RfaH sig. 43 94
o Kangiella aquimarina DSM 16071 B158DRAFT_2343 transcriptional activator RfaH strong 39 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5950 Transcriptional activator RfaH no data 38 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5081 Transcriptional activator RfaH no data 42 94
o Pseudomonas syringae pv. syringae B728a Psyr_3226 Transcriptional activator RfaH insig. 38 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3226 Transcriptional activator RfaH insig. 38 99
o Shewanella amazonensis SB2B Sama_2265 transcriptional activator rfaH, putative (RefSeq) strong 38 98
o Enterobacter sp. TBS_079 MPMX20_04440 Transcription antitermination protein RfaH strong 37 98
o Enterobacter asburiae PDN3 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH cofit 37 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF267 Transcriptional activator RfaH strong 37 98
o Escherichia fergusonii Becca EFB2_04775 Transcription antitermination protein RfaH strong 35 98
o Escherichia coli Nissle 1917 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH strong 35 98
o Escherichia coli BL21 ECD_03733 transcription antitermination protein strong 35 98
o Escherichia coli ECOR27 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH strong 35 98
o Escherichia coli ECOR38 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH strong 35 98
o Escherichia coli ECRC101 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH insig. 35 98
o Escherichia coli ECRC101 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH sig. 35 98
o Escherichia coli ECRC102 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH strong 35 98
o Escherichia coli ECRC62 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH strong 35 98
o Escherichia coli ECRC98 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH no data 35 98
o Escherichia coli ECRC99 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH no data 35 98
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04211 Transcription antitermination protein RfaH cofit 35 98
o Escherichia coli BW25113 b3842 rfaH transcriptional activator RfaH (NCBI) strong 35 98
o Erwinia tracheiphila SCR3 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH strong 35 98
o Castellaniella sp019104865 MT123 ABCV34_RS12845 transcription termination/antitermination NusG family protein insig. 36 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_05050 transcription/translation regulatory transformer protein RfaH insig. 33 94
o Pantoea sp. MT58 IAI47_18250 transcription/translation regulatory transformer protein RfaH strong 37 98
o Dickeya dadantii 3937 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH strong 36 98
o Serratia liquefaciens MT49 IAI46_01105 transcription/translation regulatory transformer protein RfaH insig. 35 98
o Dickeya dianthicola 67-19 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH strong 36 98
o Dickeya dianthicola ME23 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH cofit 36 98
o Klebsiella michiganensis M5al BWI76_RS01340 transcription/translation regulatory transformer protein RfaH no data 36 98
o Rahnella sp. WP5 EX31_RS14590 transcription/translation regulatory transformer protein RfaH insig. 31 98
o Shewanella sp. ANA-3 Shewana3_1374 transcription antitermination protein nusG (RefSeq) strong 33 96
o Pectobacterium carotovorum WPP14 HER17_RS20570 transcription/translation regulatory transformer protein RfaH strong 35 98
o Shewanella oneidensis MR-1 SO3194 transcriptional activator rfaH, putative (NCBI ptt file) strong 33 98
o Marinobacter adhaerens HP15 HP15_p187g93 transcriptional activator RfaH insig. 37 87
o Shewanella loihica PV-4 Shew_1398 NusG antitermination factor (RefSeq) strong 33 98
o Magnetospirillum magneticum AMB-1 AMB_RS00245 transcriptional activator RfaH insig. 34 93
  Marinobacter adhaerens HP15 HP15_2404 transcriptional activator RfaH strong 38 78
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14250 UpxY family transcription antiterminator insig. 28 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01815 antitermination protein NusG cofit 24 95
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00925 UpxY family transcription antiterminator strong 28 78
  Azospirillum sp. SherDot2 MPMX19_00380 Transcription termination/antitermination protein NusG no data 25 99
  Azospirillum brasilense Sp245 AZOBR_RS11535 transcription termination/antitermination factor NusG no data 25 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4415 Transcription antiterminator strong 25 94
  Fusobacterium nucleatum SB010 HUW76_10380 transcription termination/antitermination factor NusG cofit 24 94
  Rhodopseudomonas palustris CGA009 TX73_016925 transcription termination/antitermination protein NusG no data 23 99
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08980 UpxY family transcription antiterminator insig. 24 90
  Agrobacterium fabrum C58 Atu1961 transcription antitermination protein NusG no data 23 99
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07905 antitermination protein NusG insig. 23 85
  Rhizobium sp. OAE497 ABIE40_RS07770 transcription termination/antitermination protein NusG no data 25 99
  Sinorhizobium meliloti 1021 SMc01322 transcription antitermination protein NusG no data 23 99
  Shewanella loihica PV-4 Shew_0146 NusG antitermination factor (RefSeq) no data 28 95
  Mycobacterium tuberculosis H37Rv Rv0639 Probable transcription antitermination protein NusG no data 21 99
  Rhodospirillum rubrum S1H Rru_A2700 NusG antitermination factor (NCBI) no data 21 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS02950 transcription termination/antitermination protein NusG no data 24 99
  Shewanella sp. ANA-3 Shewana3_0187 transcription antitermination protein nusG (RefSeq) no data 27 93
  Shewanella oneidensis MR-1 SO0219 nusG transcription antitermination protein NusG (NCBI ptt file) no data 26 95
  Caulobacter crescentus NA1000 CCNA_03310 transcription antitermination protein NusG no data 22 99
  Caulobacter crescentus NA1000 Δfur CCNA_03310 transcription antitermination protein NusG no data 22 99
  Serratia liquefaciens MT49 IAI46_22800 hypothetical protein insig. 25 91
  Agrobacterium fabrum C58 Atu0450 transcription antitermination protein strong 26 97
  Bacteroides thetaiotaomicron VPI-5482 BT0376 putative transcriptional regulator (NCBI ptt file) insig. 23 89
  Bacteroides thetaiotaomicron VPI-5482 BT1656 putative transcriptional regulator (NCBI ptt file) sig. 25 89
  Bacteroides thetaiotaomicron VPI-5482 BT1725 putative transcriptional regulator (NCBI ptt file) no data 24 89
  Magnetospirillum magneticum AMB-1 AMB_RS15840 transcription termination/antitermination protein NusG no data 22 99
  Acidovorax sp. GW101-3H11 Ac3H11_4453 Transcription antitermination protein NusG no data 25 92
  Bosea sp. OAE506 ABIE41_RS14465 transcription termination/antitermination protein NusG no data 24 99
  Dickeya dianthicola 67-19 HGI48_RS01065 transcription termination/antitermination protein NusG no data 26 93
  Dickeya dianthicola ME23 DZA65_RS01130 transcription termination/antitermination protein NusG no data 26 93
  Pantoea sp. MT58 IAI47_18135 transcription termination/antitermination protein NusG no data 25 98
  Shewanella amazonensis SB2B Sama_0201 transcription antitermination protein NusG (RefSeq) no data 26 93
  Dickeya dadantii 3937 DDA3937_RS01075 transcription termination/antitermination protein NusG no data 25 98
  Rhodanobacter sp. FW510-T8 OKGIIK_10525 nusG transcription termination/antitermination protein NusG no data 23 93
  Erwinia tracheiphila SCR3 LU632_RS00905 nusG transcription termination/antitermination protein NusG no data 24 98
  Enterobacter asburiae PDN3 EX28DRAFT_4520 transcription antitermination protein nusG no data 29 85
  Enterobacter sp. TBS_079 MPMX20_00202 Transcription termination/antitermination protein NusG no data 29 85
  Klebsiella michiganensis M5al BWI76_RS01470 transcription termination/antitermination protein NusG no data 29 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08160 transcription termination/antitermination protein NusG no data 24 95
  Escherichia fergusonii Becca EFB2_04629 Transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli Nissle 1917 ECOLIN_RS22980 transcription termination/antitermination protein NusG no data 28 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4216 Transcription antitermination protein NusG no data 28 83
  Pectobacterium carotovorum WPP14 HER17_RS20455 transcription termination/antitermination protein NusG no data 27 95
  Rahnella sp. WP5 EX31_RS16755 transcription termination/antitermination protein NusG no data 25 98
  Escherichia coli BL21 ECD_03858 transcription termination factor no data 28 83
  Escherichia coli ECOR27 NOLOHH_05595 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECOR38 HEPCGN_12100 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC101 OKFHMN_13450 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC101 MCAODC_03950 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC102 NIAGMN_11200 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC62 BNILDI_05930 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC98 JDDGAC_17075 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli ECRC99 KEDOAH_14710 nusG transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04069 Transcription termination/antitermination protein NusG no data 28 83
  Escherichia coli BW25113 b3982 nusG transcription antitermination protein NusG (NCBI) no data 28 83
  Phocaeicola dorei CL03T12C01 ABI39_RS13390 UpxY family transcription antiterminator insig. 22 89
  Lysobacter sp. OAE881 ABIE51_RS05780 transcription termination/antitermination protein NusG no data 26 93
  Bacteroides stercoris CC31F HMPREF1181_RS03935 UpxY family transcription antiterminator cofit 24 89