Homologs of HMPREF1058_RS14685 from Phocaeicola vulgatus CL09T03C04

U32 family peptidase
SEED: Putative collagenase
KEGG: putative protease

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14685 U32 family peptidase cofit 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS10365 U32 family peptidase cofit 98 100
o Bacteroides ovatus ATCC 8483 BACOVA_03008 peptidase, U32 family cofit 78 100
o Bacteroides thetaiotaomicron VPI-5482 BT2412 putative collagenase (NCBI ptt file) sig. 77 100
o Bacteroides stercoris CC31F HMPREF1181_RS00100 U32 family peptidase cofit 73 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09995 U32 family peptidase insig. 63 99
o Shewanella loihica PV-4 Shew_0818 peptidase U32 (RefSeq) insig. 48 99
o Shewanella oneidensis MR-1 SO3797 peptidase, U32 family (NCBI ptt file) insig. 48 99
o Shewanella sp. ANA-3 Shewana3_0800 peptidase U32 (RefSeq) cofit 48 99
o Shewanella amazonensis SB2B Sama_0677 U32 family peptidase (RefSeq) insig. 48 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4570 Probable collagenase (EC 3.4.24.3) insig. 46 99
o Dechlorosoma suillum PS Dsui_2754 collagenase-like protease insig. 48 98
o Escherichia coli ECRC101 MCAODC_16340 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli ECRC102 NIAGMN_25735 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli ECRC98 JDDGAC_04090 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2594 putative collagenase insig. 44 98
o Escherichia coli BL21 ECD_01393 putative peptidase no data 44 99
o Escherichia coli ECRC62 BNILDI_17725 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli ECRC99 KEDOAH_26840 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase no data 44 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02280 putative protease YdcP insig. 44 99
o Escherichia coli BW25113 b1435 ydcP putative collagenase (VIMSS) insig. 44 99
o Acidovorax sp. GW101-3H11 Ac3H11_551 Probable collagenase (EC 3.4.24.3) insig. 43 99
o Escherichia coli ECRC100 OKFHMN_01600 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli ECOR27 NOLOHH_19275 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli ECOR38 HEPCGN_26220 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase insig. 44 99
o Escherichia coli Nissle 1917 ECOLIN_RS08280 23S rRNA 5-hydroxycytidine C2501 synthase no data 44 99
o Escherichia fergusonii Becca EFB2_02547 23S rRNA 5-hydroxycytidine synthase insig. 44 99
o Enterobacter sp. TBS_079 MPMX20_02244 23S rRNA 5-hydroxycytidine synthase insig. 44 100
o Enterobacter asburiae PDN3 EX28DRAFT_1222 Collagenase and related proteases insig. 44 99
o Pseudomonas putida KT2440 PP_3497 putative peptidase insig. 44 98
o Pseudomonas syringae pv. syringae B728a Psyr_3097 Peptidase U32 insig. 44 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3097 Peptidase U32 insig. 44 99
o Klebsiella michiganensis M5al BWI76_RS13375 protease insig. 42 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3578 Putative collagenase insig. 43 99
o Pseudomonas stutzeri RCH2 Psest_2765 Collagenase and related proteases insig. 44 99
o Pseudomonas sp. S08-1 OH686_20270 Uncharacterized protease YdcP insig. 43 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5107 Putative collagenase insig. 43 99
o Pseudomonas fluorescens FW300-N2C3 AO356_25280 protease insig. 42 99
o Pseudomonas simiae WCS417 PS417_13670 protease insig. 43 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1358 Putative collagenase insig. 42 99
o Pseudomonas sp. RS175 PFR28_01648 23S rRNA 5-hydroxycytidine synthase insig. 43 99
o Pseudomonas fluorescens SBW25 PFLU_RS15170 U32 family peptidase insig. 43 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15170 U32 family peptidase insig. 43 99
  Fusobacterium nucleatum SB010 HUW76_01120 U32 family peptidase strong 34 80
  Synechococcus elongatus PCC 7942 Synpcc7942_1622 probable proteinase insig. 35 90
  Fusobacterium nucleatum SB010 HUW76_02115 U32 family peptidase strong 38 48
  Bifidobacterium breve UCC2003 BBR_RS19280 peptidase U32 insig. 37 50
  Methanococcus maripaludis JJ MMJJ_RS01595 U32 family peptidase insig. 37 49
  Methanococcus maripaludis S2 MMP_RS03460 U32 family peptidase insig. 36 49
  Shewanella sp. ANA-3 Shewana3_1068 peptidase U32 (RefSeq) strong 31 59
  Shewanella oneidensis MR-1 SO1252 peptidase, U32 family (NCBI ptt file) strong 31 59
  Shewanella loihica PV-4 Shew_2783 peptidase U32 (RefSeq) sig. 30 59
  Desulfovibrio vulgaris Miyazaki F DvMF_2645 peptidase U32 (RefSeq) strong 35 43
  Pseudomonas simiae WCS417 PS417_10300 protease insig. 31 59
  Dickeya dadantii 3937 DDA3937_RS15295 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Kangiella aquimarina DSM 16071 B158DRAFT_1722 Collagenase and related proteases insig. 29 59
  Pseudomonas sp. S08-1 OH686_13055 Uncharacterized protease YegQ insig. 31 59
  Marinobacter adhaerens HP15 HP15_2983 peptidase, U32 family insig. 29 59
  Pseudomonas fluorescens SBW25 PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 32 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10460 tRNA 5-hydroxyuridine modification protein YegQ insig. 32 53
  Bacteroides stercoris CC31F HMPREF1181_RS01520 U32 family peptidase sig. 32 49
  Pantoea sp. MT58 IAI47_06845 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 63
  Pectobacterium carotovorum WPP14 HER17_RS06280 tRNA 5-hydroxyuridine modification protein YegQ cofit 29 60
  Bacteroides ovatus ATCC 8483 BACOVA_02723 peptidase, U32 family sig. 31 49
  Phocaeicola dorei CL03T12C01 ABI39_RS06130 U32 family peptidase cofit 31 58
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10940 U32 family peptidase strong 31 58
  Pseudomonas stutzeri RCH2 Psest_4096 Collagenase and related proteases insig. 30 59
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2485 Putative protease insig. 30 59
  Klebsiella michiganensis M5al BWI76_RS19280 U32 family peptidase insig. 28 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3925 Putative protease sig. 29 59
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05345 peptidase U32 family protein cofit 31 50
  Pseudomonas fluorescens FW300-N2E3 AO353_19800 protease insig. 29 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_45 Putative protease insig. 30 59
  Pseudomonas sp. RS175 PFR28_02843 hypothetical protein insig. 30 59
  Pseudomonas putida KT2440 PP_2206 putative peptidase insig. 32 51
  Bacteroides thetaiotaomicron VPI-5482 BT3072 collagenase precursor (NCBI ptt file) strong 30 49
  Pseudomonas fluorescens FW300-N2C3 AO356_21300 protease insig. 30 59
  Shewanella amazonensis SB2B Sama_1004 U32 family peptidase (RefSeq) strong 29 57
  Desulfovibrio vulgaris Hildenborough JW710 DVU0654 peptidase, U32 family (TIGR) sig. 34 43
  Rahnella sp. WP5 EX31_RS20325 tRNA 5-hydroxyuridine modification protein YegQ insig. 28 60
  Dechlorosoma suillum PS Dsui_0433 collagenase-like protease insig. 30 50
  Serratia liquefaciens MT49 IAI46_19015 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3846 Putative protease insig. 29 59
  Dickeya dianthicola 67-19 HGI48_RS15375 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Dickeya dianthicola ME23 DZA65_RS16195 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli BL21 ECD_01986 putative peptidase insig. 29 59
  Escherichia coli ECOR27 NOLOHH_15500 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli ECOR38 HEPCGN_02845 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli ECRC100 OKFHMN_24165 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 29 59
  Escherichia coli ECRC101 MCAODC_20775 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli ECRC102 NIAGMN_22110 yegQ tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli ECRC62 BNILDI_14415 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 29 59
  Escherichia coli ECRC98 JDDGAC_28275 yegQ tRNA 5-hydroxyuridine modification protein YegQ cofit 29 59
  Escherichia coli ECRC99 KEDOAH_03985 yegQ tRNA 5-hydroxyuridine modification protein YegQ no data 29 59
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01623 putative protease YdcP insig. 29 59
  Escherichia coli Nissle 1917 ECOLIN_RS12250 tRNA 5-hydroxyuridine modification protein YegQ insig. 29 59
  Escherichia coli BW25113 b2081 yegQ predicted peptidase (NCBI) sig. 29 59
  Acidovorax sp. GW101-3H11 Ac3H11_3295 Probable protease (EC 3.4.24.3) insig. 39 34
  Escherichia fergusonii Becca EFB2_01770 23S rRNA 5-hydroxycytidine synthase insig. 29 59
  Enterobacter sp. TBS_079 MPMX20_03067 23S rRNA 5-hydroxycytidine synthase insig. 28 59