Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01084 | | transcriptional regulator, LysR family | no data | 100 | 100 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS22295 | | LysR family transcriptional regulator | insig. | 93 | 100 |
o | Paraburkholderia graminis OAS925 | ABIE53_002233 | | LysR family transcriptional activator of nhaA | insig. | 94 | 100 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS09105 | | LysR substrate-binding domain-containing protein | insig. | 72 | 99 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_588 | | Cys regulon transcriptional activator CysB | insig. | 68 | 99 |
| Acidovorax sp. GW101-3H11 | Ac3H11_883 | | Cys regulon transcriptional activator CysB | insig. | 54 | 98 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1910 | | Cys regulon transcriptional activator CysB | insig. | 53 | 99 |
| Dechlorosoma suillum PS | Dsui_1151 | | transcriptional regulator | cofit | 47 | 96 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2422 | | transcriptional regulator, LysR family | insig. | 39 | 100 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2422 | | transcriptional regulator, LysR family | insig. | 39 | 100 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20115 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| Pseudomonas sp. RS175 | PFR28_01216 | | Transcriptional activator protein NhaR | insig. | 39 | 96 |
| Pseudomonas putida KT2440 | PP_2444 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_01805 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2228 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| Pseudomonas simiae WCS417 | PS417_10445 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3936 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_2543 | | Transcriptional regulator, LysR family | no data | 38 | 96 |
| Pseudomonas fluorescens SBW25 | PFLU_RS10530 | | transcriptional activator NhaR | insig. | 37 | 96 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS10530 | | transcriptional activator NhaR | insig. | 37 | 96 |
| Acidovorax sp. GW101-3H11 | Ac3H11_815 | | Transcriptional regulator, LysR family | insig. | 36 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01823 | | transcriptional regulator, LysR family | insig. | 37 | 99 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19615 | | LysR family transcriptional regulator | insig. | 37 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10255 | | LysR family transcriptional regulator | insig. | 37 | 99 |
| Paraburkholderia graminis OAS925 | ABIE53_004867 | | LysR family transcriptional activator of nhaA | insig. | 36 | 99 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS11585 | | transcriptional activator NhaR | insig. | 34 | 99 |
| Escherichia coli Nissle 1917 | ECOLIN_RS00110 | | transcriptional activator NhaR | insig. | 33 | 99 |
| Escherichia fergusonii Becca | EFB2_04023 | | Transcriptional activator protein NhaR | insig. | 33 | 99 |
| Escherichia coli ECOR27 | NOLOHH_03355 | nhaR | transcriptional activator NhaR | cofit | 34 | 99 |
| Escherichia coli ECOR38 | HEPCGN_09010 | nhaR | transcriptional activator NhaR | cofit | 34 | 99 |
| Escherichia coli ECRC62 | BNILDI_08250 | nhaR | transcriptional activator NhaR | insig. | 34 | 99 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03641 | | Transcriptional activator protein NhaR | insig. | 34 | 99 |
| Shewanella sp. ANA-3 | Shewana3_3036 | nhaR | transcriptional activator NhaR (RefSeq) | insig. | 32 | 99 |
| Escherichia coli BL21 | ECD_00019 | | transcriptional activator of nhaA | insig. | 34 | 99 |
| Escherichia coli BW25113 | b0020 | nhaR | DNA-binding transcriptional activator (NCBI) | strong | 34 | 99 |
| Escherichia coli ECRC101 | OKFHMN_11025 | nhaR | transcriptional activator NhaR | insig. | 34 | 99 |
| Escherichia coli ECRC101 | MCAODC_01540 | nhaR | transcriptional activator NhaR | insig. | 34 | 99 |
| Escherichia coli ECRC102 | NIAGMN_08875 | nhaR | transcriptional activator NhaR | insig. | 34 | 99 |
| Escherichia coli ECRC98 | JDDGAC_14620 | nhaR | transcriptional activator NhaR | no data | 34 | 99 |
| Escherichia coli ECRC99 | KEDOAH_17130 | nhaR | transcriptional activator NhaR | no data | 34 | 99 |
| Klebsiella michiganensis M5al | BWI76_RS04320 | | transcriptional activator NhaR | sig. | 33 | 98 |
| Shewanella oneidensis MR-1 | SO1338 | nhaR | transcriptional activator protein NhaR (NCBI ptt file) | sig. | 32 | 99 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1120 | | Transcriptional activator NhaR | insig. | 34 | 96 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3629 | | Transcriptional regulator | insig. | 33 | 98 |
| Enterobacter sp. TBS_079 | MPMX20_00723 | | Transcriptional activator protein NhaR | sig. | 33 | 98 |
| Rahnella sp. WP5 | EX31_RS03885 | | transcriptional activator NhaR | insig. | 31 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_03550 | | transcriptional activator protein NhaR | insig. | 32 | 98 |
| Shewanella loihica PV-4 | Shew_1044 | nhaR | transcriptional activator NhaR (RefSeq) | insig. | 31 | 99 |
| Pantoea sp. MT58 | IAI47_16160 | | transcriptional activator NhaR | insig. | 34 | 96 |
| Shewanella amazonensis SB2B | Sama_0870 | nhaR | transcriptional activator NhaR (RefSeq) | insig. | 32 | 99 |
| Pectobacterium carotovorum WPP14 | HER17_RS02855 | | transcriptional activator NhaR | insig. | 33 | 98 |
| Dickeya dadantii 3937 | DDA3937_RS18355 | | transcriptional activator NhaR | no data | 33 | 98 |
o | Bosea sp. OAE506 | ABIE41_RS20745 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| Serratia liquefaciens MT49 | IAI46_03090 | | transcriptional activator NhaR | insig. | 33 | 98 |
| Marinobacter adhaerens HP15 | HP15_1551 | | transcriptional Regulator, LysR family protein | insig. | 34 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_03553 | | Na(+)/H(+) antiporter regulatory protein | insig. | 26 | 99 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_07930 | | LysR family transcriptional regulator | insig. | 32 | 94 |
| Rhodopseudomonas palustris CGA009 | TX73_015515 | | LysR family transcriptional regulator | cofit | 37 | 85 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_0581 | | transcriptional regulator, LysR family | sig. | 29 | 94 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11605 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| Marinobacter adhaerens HP15 | HP15_1621 | | transcriptional regulator, LysR family protein | strong | 32 | 94 |
| Phaeobacter inhibens DSM 17395 | PGA1_78p00220 | | transcriptional regulatory protein, LysR family | no data | 31 | 85 |
| Dinoroseobacter shibae DFL-12 | Dshi_0995 | | transcriptional regulator, LysR family (RefSeq) | insig. | 32 | 85 |
| Rhizobium sp. OAE497 | ABIE40_RS29265 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| Escherichia coli BL21 | ECD_01898 | | nitrogen assimilation regulon transcriptional regulator; autorepressor | insig. | 29 | 85 |
| Escherichia coli ECOR27 | NOLOHH_16060 | nac | nitrogen assimilation transcriptional regulator NAC | no data | 29 | 85 |
| Escherichia coli BW25113 | b1988 | nac | DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) | strong | 29 | 85 |
| Escherichia coli ECOR38 | HEPCGN_03485 | nac | nitrogen assimilation transcriptional regulator NAC | cofit | 29 | 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01720 | | HTH-type transcriptional regulator GltC | insig. | 29 | 85 |
| Escherichia coli ECRC101 | OKFHMN_25150 | nac | nitrogen assimilation transcriptional regulator NAC | insig. | 29 | 85 |
| Escherichia coli ECRC101 | MCAODC_20240 | nac | nitrogen assimilation transcriptional regulator NAC | insig. | 29 | 85 |
| Escherichia coli ECRC102 | NIAGMN_22655 | nac | nitrogen assimilation transcriptional regulator NAC | no data | 29 | 85 |
| Escherichia coli ECRC62 | BNILDI_14890 | nac | nitrogen assimilation transcriptional regulator NAC | insig. | 29 | 85 |
| Escherichia coli ECRC98 | JDDGAC_29280 | nac | nitrogen assimilation transcriptional regulator NAC | no data | 29 | 85 |
| Escherichia coli ECRC99 | KEDOAH_02960 | nac | nitrogen assimilation transcriptional regulator NAC | no data | 29 | 85 |
| Magnetospirillum magneticum AMB-1 | AMB_RS01265 | | LysR family transcriptional regulator | cofit | 32 | 81 |
| Escherichia fergusonii Becca | EFB2_01927 | | HTH-type transcriptional regulator GltC | insig. | 29 | 85 |
| Escherichia coli Nissle 1917 | ECOLIN_RS11470 | | nitrogen assimilation transcriptional regulator NAC | no data | 29 | 85 |
| Variovorax sp. SCN45 | GFF3056 | | Nitrogen assimilation regulatory protein Nac | insig. | 35 | 81 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26205 | | LysR family transcriptional regulator | insig. | 28 | 81 |
| Variovorax sp. OAS795 | ABID97_RS27365 | | nitrogen assimilation transcriptional regulator NAC | insig. | 35 | 81 |
| Klebsiella michiganensis M5al | BWI76_RS18630 | | nitrogen assimilation transcriptional regulator | strong | 28 | 85 |
| Pantoea sp. MT58 | IAI47_07570 | | nitrogen assimilation transcriptional regulator NAC | sig. | 30 | 85 |
| Enterobacter sp. TBS_079 | MPMX20_02983 | | HTH-type transcriptional regulator ArgP | strong | 28 | 89 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0565 | | Transcriptional regulator | insig. | 28 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS12135 | | LysR substrate-binding domain-containing protein | insig. | 26 | 81 |
| Variovorax sp. OAS795 | ABID97_RS13375 | | LysR family transcriptional regulator | no data | 31 | 78 |
| Dickeya dadantii 3937 | DDA3937_RS05335 | | LysR family transcriptional regulator | insig. | 27 | 81 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13010 | | LysR substrate-binding domain-containing protein | insig. | 34 | 57 |
| Azospirillum sp. SherDot2 | MPMX19_03927 | | HTH-type transcriptional activator CmpR | insig. | 30 | 81 |
| Serratia liquefaciens MT49 | IAI46_16755 | | nitrogen assimilation transcriptional regulator NAC | insig. | 29 | 83 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5605 | | TcuR: regulates tcuABC genes used in utilization of tricarballylate | insig. | 28 | 81 |
| Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 29 | 81 |
| Rhodopseudomonas palustris CGA009 | TX73_024395 | | LysR substrate-binding domain-containing protein | insig. | 31 | 74 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_29085 | | LysR family transcriptional regulator | insig. | 32 | 71 |
| Variovorax sp. OAS795 | ABID97_RS22055 | | LysR substrate-binding domain-containing protein | insig. | 31 | 67 |
| Pseudomonas fluorescens SBW25 | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | insig. | 33 | 84 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | sig. | 33 | 84 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS37760 | | transcriptional regulator CynR | insig. | 30 | 80 |
| Variovorax sp. SCN45 | GFF881 | | Transcriptional regulator ligR, LysR family | insig. | 29 | 81 |