Homologs of GFF8009 from Variovorax sp. SCN45

tRNA pseudouridine(13) synthase (EC 5.4.99.27)
SEED: tRNA pseudouridine 13 synthase (EC 4.2.1.-)

73 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF8009 tRNA pseudouridine(13) synthase (EC 5.4.99.27) no data 100 100
  Lysobacter sp. OAE881 ABIE51_RS06470 tRNA pseudouridine(13) synthase TruD insig. 73 93
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3137.1 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 67 93
  Rhodanobacter denitrificans MT42 LRK55_RS16365 tRNA pseudouridine(13) synthase TruD insig. 58 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16640 tRNA pseudouridine(13) synthase TruD sig. 58 95
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12280 tRNA pseudouridine(13) synthase TruD insig. 58 95
  Rhodanobacter sp. FW510-T8 OKGIIK_08130 truD tRNA pseudouridine(13) synthase TruD sig. 55 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06605 tRNA pseudouridine(13) synthase TruD insig. 55 95
  Pseudomonas sp. DMC3 GFF2080 tRNA pseudouridine synthase D insig. 48 95
  Pseudomonas stutzeri RCH2 Psest_2811 Uncharacterized conserved protein insig. 52 93
  Pseudomonas aeruginosa MRSN321 DY961_RS14845 truD;go_function=RNA tRNA pseudouridine(13) synthase TruD insig. 50 93
  Pseudomonas aeruginosa PA14 IKLFDK_18515 tRNA pseudouridine(13) synthase TruD insig. 50 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS42280 truD;go_function=RNA tRNA pseudouridine(13) synthase TruD insig. 50 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4679 tRNA pseudouridine 13 synthase (EC 4.2.1.-) sig. 47 95
  Pseudomonas segetis P6 ACVTMO_RS16985 truD tRNA pseudouridine(13) synthase TruD insig. 49 93
  Pseudomonas simiae WCS417 PS417_06345 pseudouridine synthase insig. 47 93
  Pseudomonas orientalis W4I3 QF045_RS09190 tRNA pseudouridine(13) synthase TruD insig. 47 95
  Pseudomonas fluorescens FW300-N2E3 AO353_16595 pseudouridine synthase sig. 46 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3111 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 47 93
  Pseudomonas fluorescens SBW25 PFLU_RS06410 tRNA pseudouridine(13) synthase TruD insig. 47 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06410 tRNA pseudouridine(13) synthase TruD insig. 47 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3041 tRNA pseudouridine 13 synthase (EC 4.2.1.-) sig. 46 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01439 tRNA pseudouridine synthase D cofit 45 95
  Erwinia amylovora T8 OLJFJH_09360 tRNA pseudouridine(13) synthase TruD insig. 46 91
  Pseudomonas fluorescens FW300-N2C3 AO356_05905 pseudouridine synthase insig. 46 93
  Dickeya dadantii 3937 DDA3937_RS16890 tRNA pseudouridine(13) synthase TruD insig. 48 91
  Pseudomonas sp. S08-1 OH686_18165 tRNA pseudouridine(13) synthase cofit 50 93
  Klebsiella michiganensis M5al BWI76_RS22665 tRNA pseudouridine(13) synthase TruD insig. 44 95
  Pseudomonas syringae pv. syringae B728a Psyr_1370 tRNA pseudouridine synthase D, TruD insig. 47 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1370 tRNA pseudouridine synthase D, TruD insig. 47 95
  Enterobacter sp. TBS_079 MPMX20_03631 tRNA pseudouridine synthase D sig. 43 95
  Serratia liquefaciens MT49 IAI46_03765 tRNA pseudouridine(13) synthase TruD insig. 45 98
  Pseudomonas sp. RS175 PFR28_00423 tRNA pseudouridine synthase D insig. 45 93
  Rahnella sp. WP5 EX31_RS07845 tRNA pseudouridine(13) synthase TruD insig. 46 90
  Dickeya dianthicola ME23 DZA65_RS18035 tRNA pseudouridine(13) synthase TruD insig. 46 91
  Dickeya dianthicola 67-19 HGI48_RS16960 tRNA pseudouridine(13) synthase TruD insig. 46 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_17480 truD tRNA pseudouridine(13) synthase TruD insig. 45 91
  Erwinia tracheiphila SCR3 LU632_RS06460 truD tRNA pseudouridine(13) synthase TruD insig. 45 91
  Pectobacterium carotovorum WPP14 HER17_RS04335 tRNA pseudouridine(13) synthase TruD insig. 45 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00988 tRNA pseudouridine synthase D insig. 43 95
  Shewanella loihica PV-4 Shew_1209 pseudouridylate synthase (RefSeq) sig. 45 91
  Escherichia coli BL21 ECD_02595 tRNA(Glu) pseudouridine(13) synthase insig. 43 95
  Escherichia coli ECOR27 NOLOHH_12290 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECOR38 HEPCGN_19655 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC100 OKFHMN_20475 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC101 MCAODC_11000 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC102 NIAGMN_18245 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC62 BNILDI_10840 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC98 JDDGAC_24140 truD tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli ECRC99 KEDOAH_07665 truD tRNA pseudouridine(13) synthase TruD no data 43 95
  Escherichia coli Nissle 1917 ECOLIN_RS15350 tRNA pseudouridine(13) synthase TruD insig. 43 95
  Escherichia coli BW25113 b2745 truD tRNA pseudouridine synthase D (NCBI) insig. 43 95
  Enterobacter asburiae PDN3 EX28DRAFT_2841 tRNA pseudouridine synthase, TruD family insig. 43 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16750 tRNA pseudouridine(13) synthase TruD insig. 45 91
  Klebsiella pneumoniae MKP103 KDGMDA_03240 tRNA pseudouridine(13) synthase TruD insig. 42 95
  Klebsiella pneumoniae MRSN742743 KFA93_RS18570 truD;go_function=RNA tRNA pseudouridine(13) synthase TruD insig. 42 95
  Escherichia fergusonii Becca EFB2_01165 tRNA pseudouridine synthase D insig. 42 95
  Pseudomonas sp. BP01 JOY50_RS23735 truD tRNA pseudouridine(13) synthase TruD insig. 48 93
  Pseudomonas sp. SVBP6 COO64_RS19775 truD tRNA pseudouridine(13) synthase TruD insig. 48 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4793 tRNA pseudouridine 13 synthase (EC 4.2.1.-) insig. 42 95
  Shewanella oneidensis MR-1 SO3436 conserved hypothetical protein (NCBI ptt file) strong 43 95
  Pantoea sp. MT58 IAI47_04215 tRNA pseudouridine(13) synthase TruD insig. 43 91
  Shewanella sp. ANA-3 Shewana3_1120 tRNA pseudouridine synthase D, TruD (RefSeq) cofit 42 95
  Pseudomonas putida KT2440 PP_1619 tRNA pseudouridine synthase D insig. 48 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_02815 tRNA pseudouridine(13) synthase TruD insig. 42 95
  Shewanella amazonensis SB2B Sama_1040 pseudouridylate synthase (RefSeq) sig. 41 95
  Kangiella aquimarina DSM 16071 B158DRAFT_2295 Uncharacterized conserved protein cofit 42 97
  Alteromonas macleodii MIT1002 MIT1002_00629 tRNA pseudouridine synthase D insig. 41 89
  Marinobacter adhaerens HP15 HP15_1278 pseudouridylate synthase insig. 41 93
  Methanococcus maripaludis JJ MMJJ_RS01835 tRNA pseudouridine(13) synthase TruD insig. 29 95
  Methanococcus maripaludis S2 MMP_RS00100 tRNA pseudouridine(13) synthase TruD sig. 33 86
  Methanococcus maripaludis JJ MMJJ_RS05390 tRNA pseudouridine(13) synthase TruD insig. 34 86
  Methanococcus maripaludis S2 MMP_RS03235 tRNA pseudouridine(13) synthase TruD sig. 29 86