Homologs of GFF5644 from Variovorax sp. SCN45

Selenophosphate-dependent tRNA 2-selenouridine synthase
SEED: Selenophosphate-dependent tRNA 2-selenouridine synthase
KEGG: tRNA 2-selenouridine synthase

62 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5644 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 100 100
o Variovorax sp. OAS795 ABID97_RS08090 tRNA 2-selenouridine(34) synthase MnmH insig. 77 99
o Dechlorosoma suillum PS Dsui_2310 tRNA 2-selenouridine synthase cofit 55 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06383 tRNA 2-selenouridine synthase insig. 50 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS13610 tRNA 2-selenouridine(34) synthase MnmH insig. 51 87
o Paraburkholderia graminis OAS925 ABIE53_004984 tRNA 2-selenouridine synthase sig. 49 94
o Burkholderia phytofirmans PsJN BPHYT_RS32460 tRNA 2-selenouridine synthase insig. 49 94
o Castellaniella sp019104865 MT123 ABCV34_RS06655 tRNA 2-selenouridine(34) synthase MnmH insig. 50 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4848 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 45 95
o Dinoroseobacter shibae DFL-12 Dshi_3349 Rhodanese domain protein (RefSeq) insig. 45 94
o Phaeobacter inhibens DSM 17395 PGA1_c12200 tRNA 2-selenouridine synthase SelU insig. 45 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU0568 rhodanese-like domain protein (TIGR) insig. 39 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15280 tRNA 2-selenouridine synthase insig. 36 70
  Marinobacter adhaerens HP15 HP15_3380 rhodanese domain protein insig. 37 69
  Shewanella amazonensis SB2B Sama_0189 tRNA 2-selenouridine synthase (RefSeq) insig. 33 74
  Pseudomonas stutzeri RCH2 Psest_2461 tRNA 2-selenouridine synthase sig. 34 69
o Shewanella oneidensis MR-1 SO0195 ybbB ybbB protein (NCBI ptt file) insig. 32 85
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02183 tRNA 2-selenouridine synthase cofit 34 69
o Pseudomonas orientalis W4I3 QF045_RS12445 tRNA 2-selenouridine(34) synthase MnmH cofit 31 86
  Pseudomonas sp. RS175 PFR28_01286 tRNA 2-selenouridine synthase insig. 34 69
o Acidovorax sp. GW101-3H11 Ac3H11_1764 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 33 85
o Shewanella sp. ANA-3 Shewana3_0175 tRNA 2-selenouridine synthase (RefSeq) insig. 31 85
o Shewanella loihica PV-4 Shew_0134 tRNA 2-selenouridine synthase (RefSeq) insig. 31 85
  Pseudomonas fluorescens FW300-N2C3 AO356_01390 tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas simiae WCS417 PS417_10465 tRNA 2-selenouridine synthase insig. 34 69
  Pseudomonas segetis P6 ACVTMO_RS13260 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 34 69
  Pseudomonas sp. S08-1 OH686_21215 tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2150 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_96 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas syringae pv. syringae B728a Psyr_0697 tRNA 2-selenouridine synthase insig. 32 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0697 tRNA 2-selenouridine synthase insig. 32 69
  Pseudomonas sp. DMC3 GFF1385 tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2463 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 33 69
  Pseudomonas fluorescens FW300-N2E3 AO353_00045 tRNA 2-selenouridine synthase insig. 34 69
o Cupriavidus basilensis FW507-4G11 RR42_RS01810 tRNA 2-selenouridine synthase insig. 33 86
  Escherichia coli ECOR27 NOLOHH_00925 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 38 69
  Herbaspirillum seropedicae SmR1 HSERO_RS15815 tRNA 2-selenouridine synthase insig. 34 74
  Pseudomonas putida KT2440 PP_0822 tRNA 2-selenouridine synthase insig. 30 82
  Escherichia coli ECRC100 OKFHMN_07945 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 37 69
  Escherichia coli ECRC101 MCAODC_27160 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 37 69
  Escherichia coli ECRC102 NIAGMN_05995 mnmH tRNA 2-selenouridine(34) synthase MnmH cofit 37 69
  Escherichia coli ECRC62 BNILDI_22355 mnmH tRNA 2-selenouridine(34) synthase MnmH cofit 37 69
  Escherichia coli ECRC98 JDDGAC_11590 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 37 69
  Escherichia coli ECRC99 KEDOAH_20025 mnmH tRNA 2-selenouridine(34) synthase MnmH no data 37 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03177 tRNA 2-selenouridine synthase insig. 37 69
  Escherichia coli BL21 ECD_00453 tRNA 2-selenouridine synthase, selenophosphate-dependent insig. 37 69
  Escherichia coli BW25113 b0503 ybbB tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) insig. 37 69
  Serratia liquefaciens MT49 IAI46_14310 tRNA 2-selenouridine(34) synthase MnmH insig. 33 69
  Pseudomonas aeruginosa MRSN321 DY961_RS19865 mnmH;go_function=tRNA tRNA 2-selenouridine(34) synthase MnmH sig. 32 69
  Pseudomonas sp. BP01 JOY50_RS22920 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 32 69
  Pseudomonas aeruginosa PA14 IKLFDK_07880 tRNA 2-selenouridine(34) synthase MnmH sig. 32 69
  Pseudomonas aeruginosa PUPa3 DQ20_RS53970 mnmH;go_function=tRNA tRNA 2-selenouridine(34) synthase MnmH insig. 32 69
  Enterobacter sp. TBS_079 MPMX20_01096 tRNA 2-selenouridine synthase sig. 37 70
  Escherichia coli ECOR38 HEPCGN_06580 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 36 69
  Enterobacter asburiae PDN3 EX28DRAFT_2461 tRNA 2-selenouridine synthase insig. 36 70
  Escherichia fergusonii Becca EFB2_03558 tRNA 2-selenouridine synthase insig. 36 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4419 Selenophosphate-dependent tRNA 2-selenouridine synthase insig. 37 69
  Pseudomonas sp. SVBP6 COO64_RS03755 mnmH tRNA 2-selenouridine(34) synthase MnmH insig. 32 69
  Klebsiella pneumoniae MKP103 KDGMDA_14995 tRNA 2-selenouridine(34) synthase MnmH insig. 33 70
  Klebsiella michiganensis M5al BWI76_RS06970 selenophosphate-dependent tRNA 2-selenouridine synthase insig. 34 73
  Methanococcus maripaludis S2 MMP_RS04675 selenouridine synthase SelU-like subunit sig. 38 31
  Methanococcus maripaludis JJ MMJJ_RS00460 selenouridine synthase SelU-like subunit insig. 38 32