Homologs of GFF48 from Variovorax sp. SCN45

DNA double-strand break repair protein Mre11
SEED: DNA double-strand break repair protein Mre11

62 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Variovorax sp. SCN45	GFF48		DNA double-strand break repair protein Mre11	insig.	100	100
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS00180		DNA repair exonuclease	cofit	72	99
o	Variovorax sp. OAS795	ABID97_RS26675		DNA repair exonuclease	insig.	61	95
o	Castellaniella sp019104865 MT123	ABCV34_RS05525		DNA repair exonuclease	insig.	57	97
o	Marinobacter adhaerens HP15	HP15_1575		metallophosphoesterase	cofit	58	97
o	Burkholderia phytofirmans PsJN	BPHYT_RS26720		metallophosphatase	insig.	56	92
o	Paraburkholderia sabiae LMG 24235	QEN71_RS10995		DNA repair exonuclease	insig.	54	96
o	Paraburkholderia graminis OAS925	ABIE53_005927		DNA repair exonuclease SbcCD nuclease subunit	insig.	55	92
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02868		DNA repair exonuclease SbcCD nuclease subunit	insig.	55	92
o	Bosea sp. OAE506	ABIE41_RS16745		metallophosphoesterase	insig.	40	96
o	Phaeobacter inhibens DSM 17395	PGA1_c28290		phosphoesterase-like protein	strong	38	94
o	Xanthobacter sp. DMC5	GFF1412		hypothetical protein	insig.	39	93
o	Mycobacterium tuberculosis H37Rv	Rv1277		Conserved hypothetical protein	sig.	29	94
	Shewanella sp. ANA-3	Shewana3_2612		exodeoxyribonuclease I subunit D (RefSeq)	insig.	25	56
	Shewanella oneidensis MR-1	SO2844		exonuclease SbcD, putative (NCBI ptt file)	sig.	25	62
	Shewanella loihica PV-4	Shew_2457		nuclease SbcCD, D subunit (RefSeq)	sig.	23	63
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08350		exonuclease SbcCD subunit D C-terminal domain-containing protein	insig.	26	63
	Shewanella amazonensis SB2B	Sama_1267		exonuclease SbcD, putative (RefSeq)	sig.	25	64
	Phocaeicola dorei CL03T12C01	ABI39_RS02545		exonuclease SbcCD subunit D	insig.	27	63
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS09930		exonuclease SbcCD subunit D	insig.	27	65
	Pseudomonas orientalis W4I3	QF045_RS14415		exonuclease SbcCD subunit D C-terminal domain-containing protein	insig.	28	65
	Enterobacter asburiae PDN3	EX28DRAFT_2576		Exodeoxyribonuclease I subunit D (EC 3.1.11.1)	cofit	25	72
	Cupriavidus basilensis FW507-4G11	RR42_RS35935		exonuclease SbcD	insig.	35	24
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1707		exonuclease SbcD	insig.	33	24
	Vibrio cholerae E7946 ATCC 55056	CSW01_16840		exonuclease sbcCD subunit D	insig.	34	24
	Enterobacter sp. TBS_079	MPMX20_00985		Nuclease SbcCD subunit D	insig.	25	64
	Bacteroides ovatus ATCC 8483	BACOVA_00394		exonuclease SbcCD, D subunit	insig.	32	24
	Pseudomonas fluorescens SBW25	PFLU_RS17135		exonuclease subunit SbcD	insig.	26	65
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS17135		exonuclease subunit SbcD	insig.	26	65
	Pseudomonas simiae WCS417	PS417_15115		exonuclease SbcD	strong	26	65
	Pseudomonas fluorescens FW300-N2C3	AO356_24630		exonuclease SbcD	insig.	25	64
	Alteromonas macleodii MIT1002	MIT1002_00897		Nuclease SbcCD subunit D	insig.	26	64
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_619		Exonuclease SbcD	insig.	26	64
	Pantoea sp. MT58	IAI47_14860		exonuclease subunit SbcD	insig.	27	66
	Pseudomonas sp. RS175	PFR28_01589		Nuclease SbcCD subunit D	insig.	27	64
	Pseudomonas lactucae CFBP13502	GEMAOFIL_03324		Nuclease SbcCD subunit D	cofit	27	65
	Klebsiella michiganensis M5al	BWI76_RS06225		exonuclease sbcCD subunit D	insig.	26	65
	Escherichia coli Nissle 1917	ECOLIN_RS02405		exonuclease subunit SbcD	insig.	26	64
	Escherichia coli BL21	ECD_00346		exonuclease, dsDNA, ATP-dependent	insig.	26	64
	Escherichia fergusonii Becca	EFB2_03659		Nuclease SbcCD subunit D	insig.	26	64
	Escherichia coli ECOR27	NOLOHH_01480	sbcD	exonuclease subunit SbcD	insig.	26	64
	Escherichia coli ECOR38	HEPCGN_07190	sbcD	exonuclease subunit SbcD	insig.	26	64
	Escherichia coli ECRC100	OKFHMN_08550	sbcD	exonuclease subunit SbcD	insig.	26	64
	Escherichia coli ECRC101	MCAODC_27775	sbcD	exonuclease subunit SbcD	insig.	26	64
	Escherichia coli ECRC102	NIAGMN_06605	sbcD	exonuclease subunit SbcD	cofit	26	64
	Escherichia coli ECRC62	BNILDI_22895	sbcD	exonuclease subunit SbcD	cofit	26	64
	Escherichia coli ECRC98	JDDGAC_12205	sbcD	exonuclease subunit SbcD	insig.	26	64
	Escherichia coli ECRC99	KEDOAH_19415	sbcD	exonuclease subunit SbcD	no data	26	64
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_03278		Nuclease SbcCD subunit D	insig.	26	64
	Escherichia coli BW25113	b0398	sbcD	exonuclease, dsDNA, ATP-dependent (NCBI)	sig.	26	64
	Pseudomonas fluorescens FW300-N2E3	AO353_23680		exonuclease SbcD	insig.	27	64
	Bacteroides thetaiotaomicron VPI-5482	BT0244		putative exonuclease (NCBI ptt file)	insig.	32	24
	Pseudomonas sp. DMC3	GFF3025		Nuclease SbcCD subunit D	insig.	25	64
	Pseudomonas fluorescens GW456-L13	PfGW456L13_3307		Exonuclease SbcD	strong	25	64
	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS10290		exonuclease subunit SbcD	insig.	26	70
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_26120	sbcD	exonuclease subunit SbcD	sig.	24	73
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF4294		Exonuclease SbcD	insig.	26	57
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_4633		Exonuclease SbcD	no data	25	64
	Erwinia tracheiphila SCR3	LU632_RS18930	sbcD	exonuclease subunit SbcD	insig.	24	73
	Klebsiella pneumoniae MKP103	KDGMDA_14300		exonuclease subunit SbcD	insig.	25	64
	Azospirillum sp. SherDot2	MPMX19_04315		Nuclease SbcCD subunit D	insig.	33	34
	Desulfovibrio vulgaris Hildenborough JW710	DVU0070	yhaO	Ser/Thr protein phosphatase family protein (TIGR)	insig.	26	67