Homologs of PGA1_c03880 from Phaeobacter inhibens DSM 17395

putative transcriptional activator protein RaiR
SEED: Transcriptional activator protein raiR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c03880 putative transcriptional activator protein RaiR strong 100 100
o Dinoroseobacter shibae DFL-12 Dshi_2852 transcriptional regulator, LuxR family (RefSeq) strong 54 97
o Rhodospirillum rubrum S1H Rru_A3395 Transcriptional Regulator, LuxR family (NCBI) strong 30 97
o Sinorhizobium meliloti 1021 SMc00170 transcription regulator HSL-dependent protein insig. 28 86
o Paraburkholderia sabiae LMG 24235 QEN71_RS18005 LuxR family transcriptional regulator strong 27 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS0130700 qscR;inference=COORDINATES quorum-sensing transcriptional repressor QscR insig. 24 95
o Pseudomonas aeruginosa MRSN321 DY961_RS21240 qscR;inference=COORDINATES quorum-sensing transcriptional repressor QscR insig. 23 95
o Pseudomonas aeruginosa PA14 IKLFDK_09265 quorum-sensing transcriptional repressor QscR insig. 23 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01632 LuxR family transcriptional regulator, quorum-sensing transcription factor LasR strong 27 79
  Paraburkholderia graminis OAS925 ABIE53_004324 LuxR family quorum-sensing transcriptional regulator LasR strong 27 79
  Burkholderia phytofirmans PsJN BPHYT_RS21240 LuxR family transcriptional regulator sig. 27 79
  Sphingobium sp. HT1-2 GFF5002 Acyl-homoserine lactone-binding transcriptional activator, LuxR family cofit 30 76
  Pseudomonas fluorescens FW300-N2C3 AO356_16370 hypothetical protein sig. 27 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05019 Transcriptional activator protein AnoR cofit 27 72
  Pseudomonas sp. RS175 PFR28_02249 hypothetical protein insig. 25 77
  Pseudomonas aeruginosa MRSN321 DY961_RS05760 lasR;inference=COORDINATES transcriptional regulator LasR strong 25 80
  Pseudomonas aeruginosa PA14 IKLFDK_06795 transcriptional regulator LasR strong 25 80
  Pseudomonas aeruginosa PUPa3 DQ20_RS47030 lasR;inference=COORDINATES transcriptional regulator LasR strong 25 80
  Pseudomonas fluorescens SBW25 PFLU_RS26255 LuxR family transcriptional regulator insig. 27 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26255 LuxR family transcriptional regulator insig. 27 78
  Rhodospirillum rubrum S1H Rru_A1935 Transcriptional Regulator, LuxR family (NCBI) sig. 29 77
  Ralstonia solanacearum PSI07 RPSI07_RS03145 LuxR family transcriptional regulator cofit 28 77
  Rhizobium sp. OAE497 ABIE40_RS18780 LuxR family transcriptional regulator insig. 27 77
  Pectobacterium carotovorum WPP14 HER17_RS21045 LuxR family transcriptional regulator insig. 26 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1645.1 Transcriptional regulator ahyR/asaR family insig. 27 72
  Ralstonia sp. UNC404CL21Col ABZR87_RS22810 autoinducer binding domain-containing protein insig. 27 77
  Pseudomonas sp. SVBP6 COO64_RS02905 autoinducer binding domain-containing protein insig. 27 77
  Pseudomonas aeruginosa MRSN321 DY961_RS15530 rhlR;inference=COORDINATES transcriptional regulator RhlR strong 30 77
  Pseudomonas aeruginosa PA14 IKLFDK_17845 transcriptional regulator RhlR strong 30 77
  Pseudomonas aeruginosa PUPa3 DQ20_RS41535 rhlR;inference=COORDINATES transcriptional regulator RhlR strong 30 77
  Burkholderia phytofirmans PsJN BPHYT_RS00600 histidine kinase sig. 28 76
  Pectobacterium carotovorum WPP14 HER17_RS13915 LuxR family transcriptional regulator cofit 26 77
  Ralstonia solanacearum GMI1000 RS_RS16470 transcriptional activator protein SolR insig. 25 77
  Pseudomonas orientalis W4I3 QF045_RS26625 LuxR family transcriptional regulator cofit 25 78
  Pseudomonas fluorescens SBW25 PFLU_RS06840 LuxR family transcriptional regulator insig. 27 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06840 LuxR family transcriptional regulator insig. 27 77
  Pseudomonas fluorescens FW300-N2C3 AO356_28160 hypothetical protein insig. 24 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2068 Regulatory protein, LuxR:Tetratricopeptide TPR_4 insig. 38 40
  Ralstonia solanacearum GMI1000 RS_RS20830 LuxR family transcriptional regulator insig. 27 78
  Agrobacterium fabrum C58 Atu2727 transcriptional regulator, LuxR family sig. 28 75
  Pseudomonas fluorescens FW300-N2E3 AO353_13955 hypothetical protein insig. 24 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08615 LuxR family transcriptional regulator insig. 25 77
  Ralstonia solanacearum UW163 UW163_RS04995 LuxR family transcriptional regulator insig. 25 77
  Pseudomonas fluorescens FW300-N2C3 AO356_12455 hypothetical protein insig. 21 74
  Pseudomonas sp. SVBP6 COO64_RS25270 LuxR family transcriptional regulator insig. 28 72
  Ralstonia solanacearum PSI07 RPSI07_RS08620 LuxR family transcriptional regulator cofit 25 77
  Agrobacterium fabrum C58 Atu0707 transcriptional regulator, LuxR family insig. 45 29
  Pseudomonas orientalis W4I3 QF045_RS25685 LuxR C-terminal-related transcriptional regulator cofit 42 31
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01935 DNA-binding response regulator sig. 40 31
  Rhodopseudomonas palustris CGA009 TX73_001665 HTH-type quorum sensing-dependent transcriptional regulator RpaR cofit 28 76
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1439 Transcriptional activator protein SolR insig. 26 81
  Dinoroseobacter shibae DFL-12 Dshi_1815 transcriptional regulator, LuxR family (RefSeq) insig. 25 83
  Pseudomonas syringae pv. syringae B728a Psyr_4216 regulatory protein, LuxR insig. 27 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4216 regulatory protein, LuxR insig. 27 74
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08695 LuxR family transcriptional regulator cofit 26 74
  Pseudomonas syringae pv. syringae B728a Psyr_1622 regulatory protein, LuxR:Autoinducer-binding protein insig. 24 77
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1622 regulatory protein, LuxR:Autoinducer-binding protein insig. 24 77
  Rhizobium sp. OAE497 ABIE40_RS05285 autoinducer binding domain-containing protein insig. 38 40
  Pseudomonas sp. RS175 PFR28_03797 Transcriptional activator protein AnoR insig. 25 78
  Dickeya dianthicola ME23 DZA65_RS00515 LuxR family transcriptional regulator insig. 24 77
  Dickeya dadantii 3937 DDA3937_RS06905 LuxR family transcriptional regulator insig. 27 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04831 HTH-type transcriptional regulator MalT cofit 41 32
  Dickeya dianthicola 67-19 HGI48_RS00515 LuxR family transcriptional regulator sig. 24 77
  Dickeya dianthicola ME23 DZA65_RS07235 LuxR family transcriptional regulator insig. 26 74
  Dinoroseobacter shibae DFL-12 Dshi_1819 transcriptional regulator, LuxR family (RefSeq) insig. 24 86
  Pseudomonas fluorescens FW300-N2C3 AO356_15655 zinc protease insig. 25 78
  Pseudomonas simiae WCS417 PS417_24330 LuxR family transcriptional regulator insig. 24 77
  Sinorhizobium meliloti 1021 SMc03896 transcriptional regulator insig. 32 72
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5100 Transcriptional regulator ahyR/asaR family insig. 27 72
  Pseudomonas aeruginosa MRSN321 DY961_RS15825 LuxR C-terminal-related transcriptional regulator insig. 39 30
  Dickeya dadantii 3937 DDA3937_RS20730 LuxR family transcriptional regulator insig. 24 77
  Pseudomonas aeruginosa PA14 IKLFDK_17560 helix-turn-helix transcriptional regulator insig. 39 30
  Pseudomonas aeruginosa PUPa3 DQ20_RS41255 LuxR C-terminal-related transcriptional regulator insig. 39 30
  Pseudomonas sp. BP01 JOY50_RS13155 autoinducer binding domain-containing protein insig. 27 76
  Dickeya dianthicola 67-19 HGI48_RS06890 LuxR family transcriptional regulator insig. 26 74
o Pantoea sp. MT58 IAI47_12485 transcriptional regulator SdiA cofit 21 94
  Pseudomonas sp. BP01 JOY50_RS13075 LuxR family transcriptional regulator no data 23 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21335 response regulator transcription factor sig. 37 28
  Agrobacterium fabrum C58 Atu2285 transcriptional regulator, LuxR family insig. 30 69
  Pseudomonas putida KT2440 PP_4647 transcriptional regulator, LuxR family insig. 27 78
  Rhodanobacter denitrificans MT42 LRK55_RS14195 response regulator transcription factor no data 35 28
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14480 response regulator transcription factor strong 35 28
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14100 response regulator transcription factor insig. 35 28
  Rhodanobacter sp. FW510-T8 OKGIIK_03330 citB DNA-binding response regulator insig. 35 28
  Klebsiella michiganensis M5al BWI76_RS19210 LuxR family transcriptional regulator insig. 26 75
  Pseudomonas fluorescens SBW25 PFLU_RS25250 helix-turn-helix transcriptional regulator cofit 42 31
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25250 helix-turn-helix transcriptional regulator insig. 42 31
  Sinorhizobium meliloti 1021 SMc04032 transcriptional regulator insig. 24 72
  Pseudomonas fluorescens FW300-N2E3 AO353_08640 hypothetical protein insig. 23 79
  Cupriavidus basilensis FW507-4G11 RR42_RS36380 LuxR family transcriptional regulator insig. 42 27
  Pseudomonas simiae WCS417 PS417_23420 LuxR family transcriptional regulator insig. 42 26
  Ralstonia solanacearum PSI07 RPSI07_RS00150 DNA-binding response regulator insig. 36 36
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5287 Transcriptional regulator, LuxR family insig. 35 35
  Pseudomonas sp. DMC3 GFF1873 HTH-type transcriptional regulator MalT insig. 42 28
  Sphingobium sp. HT1-2 GFF1825 Two-component transcriptional response regulator, NarL/FixJ family cofit 47 26
  Variovorax sp. SCN45 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 insig. 41 26
  Lysobacter sp. OAE881 ABIE51_RS10320 response regulator transcription factor insig. 41 26
  Pseudomonas fluorescens SBW25 PFLU_RS04600 LuxR family transcriptional regulator insig. 38 30
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04600 LuxR family transcriptional regulator strong 38 30
  Pseudomonas stutzeri RCH2 Psest_1124 ATP-dependent transcriptional regulator sig. 36 35